Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
5343 plasminogen-like B1 chr2 -88042609 - 88048109 88043109

Transcription Factor Binding Sites

 
Download all TFBS in the promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 88050320 88050337 3.0E-06 GAGGTCAGGGGAGGTTCT 18
V_E2F1_Q3_01_M00938 TRANSFAC - 88045084 88045099 5.0E-06 ACAGCGCGAAACAGGA 16
V_LXRB_RXRA_Q5_M02021 TRANSFAC - 88050324 88050338 1.0E-06 TGAGGTCAGGGGAGG 15
V_ATF1_04_M02842 TRANSFAC - 88050268 88050281 4.0E-06 TGATGACAAATATC 14
V_ATF1_Q6_M00691 TRANSFAC - 88050358 88050368 8.0E-06 CTCTGAAGACA 11
V_T3RBETA_Q6_01_M02119 TRANSFAC - 88050330 88050346 0.0E+00 AGGGAAGATGAGGTCAG 17
V_T3RALPHA_Q6_M01724 TRANSFAC - 88050330 88050340 5.0E-06 GATGAGGTCAG 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL