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CLIC5 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 53405 chloride intracellular channel 5 chr6 - 46047585 - 46053085 46048085 Transcription Factor Binding Sites   Download all TFBS in the CLIC5 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_15_3 SELEX + 46048534 46048548 9.0E-06 ATGAATTCCATTTAC 15 SOX21_HMG_DBD_dimeric_13_2 SELEX - 46048535 46048547 3.0E-06 TAAATGGAATTCA 13 SRY_HMG_DBD_dimeric_13_2 SELEX + 46048535 46048547 0.0E+00 TGAATTCCATTTA 13 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 46048531 46048548 1.0E-05 GTAATGAATTCCATTTAC 18 SOX9_HMG_full_dimeric_17_3 SELEX + 46048533 46048549 4.0E-06 AATGAATTCCATTTACA 17 SOX7_HMG_full_dimeric_17_2 SELEX + 46048533 46048549 3.0E-06 AATGAATTCCATTTACA 17 SOX7_HMG_full_dimeric_17_2 SELEX - 46048533 46048549 5.0E-06 TGTAAATGGAATTCATT 17 SOX15_HMG_full_dimeric_15_3 SELEX + 46048534 46048548 1.0E-06 ATGAATTCCATTTAC 15 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 46048157 46048165 8.0E-06 AAACCACAA 9 POU3F3_POU_DBD_monomeric_13_1 SELEX - 46048481 46048493 6.0E-06 AATAGGCAAATAA 13 SOX8_HMG_full_dimeric_13_1 SELEX + 46048534 46048546 4.0E-06 ATGAATTCCATTT 13 Sox17_HMG_DBD_dimeric_15_2 SELEX + 46048534 46048548 0.0E+00 ATGAATTCCATTTAC 15 Sox17_HMG_DBD_dimeric_15_2 SELEX - 46048534 46048548 4.0E-06 GTAAATGGAATTCAT 15 SOX2_HMG_full_dimeric_15_1 SELEX + 46048534 46048548 1.0E-06 ATGAATTCCATTTAC 15 SOX2_HMG_full_dimeric_15_1 SELEX - 46048534 46048548 8.0E-06 GTAAATGGAATTCAT 15 SOX14_HMG_DBD_dimeric_15_1 SELEX + 46048534 46048548 0.0E+00 ATGAATTCCATTTAC 15 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 46048477 46048494 9.0E-06 ACAATTATTTGCCTATTG 18 SOX18_HMG_full_dimeric_15_3 SELEX + 46048534 46048548 2.0E-06 ATGAATTCCATTTAC 15 Sox3_HMG_DBD_dimeric_17_3 SELEX + 46048533 46048549 2.0E-06 AATGAATTCCATTTACA 17 Sox3_HMG_DBD_dimeric_17_3 SELEX - 46048533 46048549 6.0E-06 TGTAAATGGAATTCATT 17 RUNX1_MA0002.2 JASPAR - 46048157 46048167 8.0E-06 ACTTGTGGTTT 11 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 46048477 46048494 8.0E-06 ACAATTATTTGCCTATTG 18 Sox1_HMG_DBD_dimeric_15_2 SELEX + 46048534 46048548 0.0E+00 ATGAATTCCATTTAC 15 Sox1_HMG_DBD_dimeric_15_2 SELEX - 46048534 46048548 7.0E-06 GTAAATGGAATTCAT 15 V_AML_Q6_M00769 TRANSFAC - 46048155 46048169 7.0E-06 GGACTTGTGGTTTGC 15 V_SOX30_03_M02804 TRANSFAC + 46048472 46048487 1.0E-06 ATAGAACAATTATTTG 16 V_EVI1_04_M00081 TRANSFAC - 46048545 46048559 2.0E-06 AGATAAGAAATGTAA 15 V_AML3_Q6_M01856 TRANSFAC + 46048158 46048165 1.0E-05 AACCACAA 8 V_SOX11_04_M02899 TRANSFAC - 46048471 46048484 4.0E-06 ATAATTGTTCTATG 14 V_DLX2_01_M01468 TRANSFAC - 46048472 46048487 4.0E-06 CAAATAATTGTTCTAT 16 V_HOXD13_01_M01404 TRANSFAC - 46048143 46048158 2.0E-06 TTGCTTATAAAACTCT 16 V_HOXC13_01_M01317 TRANSFAC - 46048144 46048159 9.0E-06 TTTGCTTATAAAACTC 16 V_SOX13_03_M02797 TRANSFAC + 46048471 46048486 0.0E+00 CATAGAACAATTATTT 16 V_SOX7_03_M02807 TRANSFAC + 46048469 46048490 2.0E-06 CACATAGAACAATTATTTGCCT 22 V_RUNX1_01_M02257 TRANSFAC - 46048157 46048167 8.0E-06 ACTTGTGGTTT 11 V_SOX1_04_M02906 TRANSFAC - 46048472 46048486 3.0E-06 AAATAATTGTTCTAT 15 V_AML2_01_M01759 TRANSFAC + 46048158 46048165 1.0E-05 AACCACAA 8 V_HNF3_Q6_M00791 TRANSFAC - 46048480 46048492 7.0E-06 ATAGGCAAATAAT 13 V_SOX18_03_M02801 TRANSFAC - 46048470 46048485 2.0E-06 AATAATTGTTCTATGT 16 V_OCT1_04_M00138 TRANSFAC - 46048476 46048498 5.0E-06 GTATCAATAGGCAAATAATTGTT 23 V_SOX15_03_M02799 TRANSFAC + 46048471 46048487 4.0E-06 CATAGAACAATTATTTG 17 V_NKX61_02_M01469 TRANSFAC - 46048474 46048489 9.0E-06 GGCAAATAATTGTTCT 16 V_SOX8_03_M02808 TRANSFAC - 46048471 46048487 2.0E-06 CAAATAATTGTTCTATG 17 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 46048157 46048164 1.0E-05 TGTGGTTT 8 V_PR_02_M00957 TRANSFAC - 46048468 46048494 8.0E-06 CAATAGGCAAATAATTGTTCTATGTGA 27 V_BARHL2_01_M01446 TRANSFAC + 46048472 46048487 8.0E-06 ATAGAACAATTATTTG 16 V_SOX12_03_M02796 TRANSFAC - 46048470 46048483 2.0E-06 TAATTGTTCTATGT 14 V_SRY_05_M02917 TRANSFAC + 46048470 46048486 6.0E-06 ACATAGAACAATTATTT 17 V_SOX5_07_M02909 TRANSFAC - 46048471 46048487 3.0E-06 CAAATAATTGTTCTATG 17 V_BARX1_01_M01340 TRANSFAC - 46048472 46048487 2.0E-06 CAAATAATTGTTCTAT 16 V_TAACC_B_M00331 TRANSFAC + 46048145 46048167 6.0E-06 AGTTTTATAAGCAAACCACAAGT 23 V_GBX1_01_M01371 TRANSFAC - 46048473 46048489 9.0E-06 GGCAAATAATTGTTCTA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.