Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PLCB2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5330 phospholipase C, beta 2 chr15 - 40599674 - 40605174 40600174 Transcription Factor Binding Sites   Download all TFBS in the PLCB2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX - 40599572 40599582 8.0E-06 TAGGTGTGAGA 11 CTCF_MA0139.1 JASPAR + 40599940 40599958 3.0E-06 CAGCCAGGAGGGGGAGCCA 19 PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 40599620 40599628 5.0E-06 CTTAATCCC 9 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 40599633 40599640 5.0E-06 ATAAACAA 8 POU2F1_POU_DBD_dimeric_14_1 SELEX + 40600542 40600555 1.0E-06 TTTGAATAAGCAAA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 40600542 40600555 1.0E-06 TTTGCTTATTCAAA 14 TBX1_TBX_DBD_dimeric_23_1 SELEX - 40602369 40602391 6.0E-06 CTGCCCACCCTGGAGGGGTGAGA 23 EWSR1-FLI1_MA0149.1 JASPAR + 40599918 40599935 1.0E-06 GGCAGAAGGGCAGGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 40599922 40599939 5.0E-06 GAAGGGCAGGAAGGAGGC 18 EWSR1-FLI1_MA0149.1 JASPAR + 40599930 40599947 0.0E+00 GGAAGGAGGCCAGCCAGG 18 NFIX_NFI_full_dimeric_15_2 SELEX + 40595499 40595513 1.0E-05 TTGGCAAACTTCCCA 15 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 40599548 40599561 4.0E-06 GACCACCCAGGCAG 14 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 40602610 40602627 5.0E-06 AAGTTCATTTGTTCACTT 18 ZIC4_C2H2_DBD_monomeric_15_1 SELEX + 40602406 40602420 4.0E-06 TGCCCCCTGCTGGGT 15 Klf4_MA0039.2 JASPAR - 40600198 40600207 1.0E-05 AGGGTGGGGC 10 Klf4_MA0039.2 JASPAR + 40600763 40600772 1.0E-05 TGGGCGTGGC 10 PITX1_homeodomain_full_monomeric_8_1 SELEX + 40599621 40599628 1.0E-05 TTAATCCC 8 EOMES_TBX_DBD_monomeric_13_1 SELEX - 40599570 40599582 9.0E-06 TAGGTGTGAGAAG 13 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 40599630 40599640 6.0E-06 ATAAACAAACC 11 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 40599748 40599757 7.0E-06 ACCACCTGGT 10 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 40600753 40600762 9.0E-06 AAAAATTAGC 10 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 40600542 40600555 1.0E-06 TTTGAATAAGCAAA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 40600542 40600555 2.0E-06 TTTGCTTATTCAAA 14 SP1_MA0079.2 JASPAR + 40600181 40600190 7.0E-06 CCCCGCCCCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX + 40600543 40600554 1.0E-06 TTGAATAAGCAA 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 40600543 40600554 8.0E-06 TTGCTTATTCAA 12 ZIC3_C2H2_full_monomeric_15_1 SELEX + 40602406 40602420 6.0E-06 TGCCCCCTGCTGGGT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 40599630 40599640 7.0E-06 ATAAACAAACC 11 POU1F1_POU_DBD_monomeric_17_1 SELEX + 40600540 40600556 8.0E-06 GTTTTGAATAAGCAAAG 17 TBX2_TBX_full_monomeric_11_1 SELEX - 40599572 40599582 8.0E-06 TAGGTGTGAGA 11 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 40599621 40599628 1.0E-05 TTAATCCC 8 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 40600759 40600773 4.0E-06 TGCCACGCCCAGCTA 15 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 40600543 40600554 2.0E-06 TTGAATAAGCAA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 40600543 40600554 7.0E-06 TTGCTTATTCAA 12 Pou5f1_MA0142.1 JASPAR - 40600541 40600555 1.0E-05 TTTGCTTATTCAAAA 15 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 40599633 40599640 5.0E-06 ATAAACAA 8 POU3F3_POU_DBD_dimeric_12_1 SELEX + 40600543 40600554 1.0E-06 TTGAATAAGCAA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 40600543 40600554 9.0E-06 TTGCTTATTCAA 12 RREB1_MA0073.1 JASPAR + 40600966 40600985 3.0E-06 ACCCACCTCACCAGACTCCC 20 GLIS2_C2H2_DBD_monomeric_14_1 SELEX + 40601366 40601379 8.0E-06 TACCCCCAACAACG 14 ZIC1_C2H2_full_monomeric_14_1 SELEX + 40602406 40602419 3.0E-06 TGCCCCCTGCTGGG 14 V_FLI1_Q6_M01208 TRANSFAC - 40600217 40600227 7.0E-06 CAGGAAGTGCT 11 V_POU3F3_01_M03090 TRANSFAC + 40600743 40600759 9.0E-06 TAAAAATGCAAAAAATT 17 V_NF1_Q6_01_M00806 TRANSFAC - 40595497 40595513 5.0E-06 TGGGAAGTTTGCCAAGA 17 V_ZFX_01_M01593 TRANSFAC - 40601315 40601330 5.0E-06 GGCCAGGCCCCAGAGG 16 V_POU5F1_02_M02245 TRANSFAC - 40600541 40600555 1.0E-05 TTTGCTTATTCAAAA 15 V_MAFB_03_M02879 TRANSFAC + 40600745 40600759 0.0E+00 AAAATGCAAAAAATT 15 V_OCT1_Q5_01_M00930 TRANSFAC - 40600747 40600757 5.0E-06 TTTTTTGCATT 11 V_EGR_Q6_M00807 TRANSFAC - 40600182 40600192 6.0E-06 GTGGGGGCGGG 11 V_OCTAMER_01_M01324 TRANSFAC + 40600743 40600759 9.0E-06 TAAAAATGCAAAAAATT 17 V_GLI1_Q2_M01042 TRANSFAC + 40599548 40599557 3.0E-06 GACCACCCAG 10 V_GLI1_01_M01702 TRANSFAC + 40599548 40599558 2.0E-06 GACCACCCAGG 11 V_MAF_Q6_M00648 TRANSFAC - 40601226 40601241 6.0E-06 CAAGAGGAAGTGGGCT 16 V_FOXJ1_03_M02750 TRANSFAC - 40599628 40599643 4.0E-06 TGGATAAACAAACCTG 16 V_SP1_03_M02281 TRANSFAC + 40600181 40600190 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 40600761 40600772 1.0E-06 GCCACGCCCAGC 12 V_NERF_Q2_M00531 TRANSFAC + 40599925 40599942 2.0E-06 GGGCAGGAAGGAGGCCAG 18 V_SP1_02_M01303 TRANSFAC - 40600179 40600189 8.0E-06 GGGGCGGGGGC 11 V_PU1_Q4_M01172 TRANSFAC + 40601224 40601242 9.0E-06 CCAGCCCACTTCCTCTTGC 19 V_LYF1_01_M00141 TRANSFAC + 40602304 40602312 9.0E-06 TTTGGGAAA 9 V_FOXP3_01_M01599 TRANSFAC - 40599633 40599640 5.0E-06 ATAAACAA 8 V_ETS_Q4_M00771 TRANSFAC + 40600216 40600227 7.0E-06 CAGCACTTCCTG 12 V_CP2_02_M00947 TRANSFAC - 40601214 40601228 4.0E-06 GCTGGGCTGAGCTGG 15 V_GLI3_02_M01704 TRANSFAC + 40599548 40599558 2.0E-06 GACCACCCAGG 11 V_ZNF219_01_M01122 TRANSFAC + 40600184 40600195 8.0E-06 CGCCCCCACCCC 12 V_SPI1_03_M02078 TRANSFAC - 40601230 40601239 1.0E-06 AGAGGAAGTG 10 V_ZIC3_01_M00450 TRANSFAC - 40599548 40599556 6.0E-06 TGGGTGGTC 9 V_SOX8_04_M02912 TRANSFAC - 40602286 40602299 4.0E-06 GCATTCATGTAACT 14 V_KROX_Q6_M00982 TRANSFAC + 40600182 40600195 0.0E+00 CCCGCCCCCACCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 40600591 40600600 2.0E-06 TCCTCCCCCA 10 V_SP1_Q6_M00196 TRANSFAC - 40600179 40600191 6.0E-06 TGGGGGCGGGGGC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 40600084 40600097 8.0E-06 GTGGGAGGAGGGTG 14 V_OCT1_05_M00161 TRANSFAC + 40601356 40601369 5.0E-06 GGGCTTTGCATACC 14 V_PAX5_01_M00143 TRANSFAC - 40595322 40595349 2.0E-06 CTGGAAGCCAAGGAAGGGGAGCGGCAGC 28 V_BCL6_Q3_M01171 TRANSFAC - 40599578 40599587 5.0E-06 GGTTCTAGGT 10 V_MATH1_Q2_M01716 TRANSFAC + 40599749 40599758 9.0E-06 CCACCTGGTG 10 V_GADP_01_M01258 TRANSFAC + 40600219 40600230 6.0E-06 CACTTCCTGCTC 12 V_PAX6_Q2_M00979 TRANSFAC + 40602436 40602449 4.0E-06 ATGTCCTGGAAGTT 14 V_OCT1_04_M00138 TRANSFAC + 40600740 40600762 5.0E-06 TACTAAAAATGCAAAAAATTAGC 23 V_ZIC1_01_M00448 TRANSFAC - 40599548 40599556 6.0E-06 TGGGTGGTC 9 V_LMO2COM_01_M00277 TRANSFAC - 40600611 40600622 7.0E-06 CGGCAGGTGCAC 12 V_CTCF_02_M01259 TRANSFAC + 40599937 40599956 1.0E-05 GGCCAGCCAGGAGGGGGAGC 20 V_CTCF_02_M01259 TRANSFAC - 40602405 40602424 8.0E-06 GTGCACCCAGCAGGGGGCAT 20 V_CTCF_01_M01200 TRANSFAC + 40599939 40599958 1.0E-06 CCAGCCAGGAGGGGGAGCCA 20 V_OCT1_B_M00342 TRANSFAC - 40601358 40601367 7.0E-06 TATGCAAAGC 10 V_OCT_Q6_M00795 TRANSFAC - 40600747 40600757 5.0E-06 TTTTTTGCATT 11 V_FOXO1_Q5_M01216 TRANSFAC - 40599632 40599640 2.0E-06 ATAAACAAA 9 V_ELK1_01_M00007 TRANSFAC + 40600150 40600165 8.0E-06 GAAGCAGGAAGCCCCC 16 V_GLI3_01_M01596 TRANSFAC - 40599547 40599557 4.0E-06 CTGGGTGGTCA 11 V_SP4_Q5_M01273 TRANSFAC + 40600180 40600190 5.0E-06 CCCCCGCCCCC 11 V_FREAC2_01_M00290 TRANSFAC - 40599630 40599645 8.0E-06 CTTGGATAAACAAACC 16 V_ELF1_Q6_M00746 TRANSFAC - 40601231 40601242 2.0E-06 GCAAGAGGAAGT 12 V_FXR_IR1_Q6_M00767 TRANSFAC - 40599608 40599620 4.0E-06 GGGTGTATGTCCC 13 V_GLI2_01_M01703 TRANSFAC + 40599548 40599558 2.0E-06 GACCACCCAGG 11 V_POU5F1_01_M01307 TRANSFAC + 40600747 40600756 0.0E+00 AATGCAAAAA 10 V_GABPBETA_Q3_M01876 TRANSFAC - 40601229 40601239 1.0E-05 AGAGGAAGTGG 11 V_TAL1_01_M01591 TRANSFAC + 40600235 40600247 0.0E+00 CTTCCTTCTCTGC 13 V_OCT1_Q6_M00195 TRANSFAC + 40600744 40600758 4.0E-06 AAAAATGCAAAAAAT 15 V_OCT1_Q6_M00195 TRANSFAC - 40601356 40601370 6.0E-06 GGGTATGCAAAGCCC 15 V_HEN1_02_M00058 TRANSFAC - 40599757 40599778 5.0E-06 AGGGGCCTCAGCTGCTGGAGCA 22 V_FPM315_01_M01587 TRANSFAC - 40600086 40600097 4.0E-06 GTGGGAGGAGGG 12 V_SPIC_02_M02077 TRANSFAC - 40601230 40601239 3.0E-06 AGAGGAAGTG 10 V_PITX2_Q2_M00482 TRANSFAC + 40599620 40599630 8.0E-06 CTTAATCCCAG 11 V_ETS1_B_M00339 TRANSFAC - 40600214 40600228 2.0E-06 GCAGGAAGTGCTGAG 15 V_ZFP281_01_M01597 TRANSFAC - 40600181 40600191 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 40600187 40600197 1.0E-06 TGGGGGTGGGG 11 V_TBX5_Q5_M01044 TRANSFAC + 40599573 40599582 4.0E-06 CTCACACCTA 10 V_EWSR1FLI1_01_M02252 TRANSFAC + 40599918 40599935 1.0E-06 GGCAGAAGGGCAGGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 40599922 40599939 5.0E-06 GAAGGGCAGGAAGGAGGC 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 40599930 40599947 0.0E+00 GGAAGGAGGCCAGCCAGG 18 V_VDR_Q3_M00444 TRANSFAC - 40600955 40600969 8.0E-06 GGGTGAGGGGAGTGA 15 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 40599668 40599675 1.0E-05 TGTGGTTT 8 V_EKLF_Q5_M01874 TRANSFAC + 40600199 40600208 9.0E-06 CCCCACCCTG 10 V_FOXO1_01_M00473 TRANSFAC - 40599632 40599641 7.0E-06 GATAAACAAA 10 V_PAX4_02_M00377 TRANSFAC + 40600752 40600762 2.0E-06 AAAAAATTAGC 11 V_GLI_Q2_M01037 TRANSFAC - 40599547 40599558 7.0E-06 CCTGGGTGGTCA 12 V_CTF1_01_M01196 TRANSFAC - 40595339 40595352 1.0E-06 TGGCTGGAAGCCAA 14 V_FREAC4_01_M00292 TRANSFAC - 40599630 40599645 2.0E-06 CTTGGATAAACAAACC 16 V_SP1_Q2_01_M00933 TRANSFAC + 40600181 40600190 4.0E-06 CCCCGCCCCC 10 V_FOXO4_01_M00472 TRANSFAC - 40599630 40599640 1.0E-06 ATAAACAAACC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC - 40600959 40600972 4.0E-06 GGTGGGTGAGGGGA 14 V_MAFK_04_M02880 TRANSFAC + 40600741 40600755 7.0E-06 ACTAAAAATGCAAAA 15 V_P300_01_M00033 TRANSFAC - 40600952 40600965 6.0E-06 GAGGGGAGTGATTG 14 TLX1_NFIC_MA0119.1 JASPAR - 40595339 40595352 1.0E-06 TGGCTGGAAGCCAA 14 V_ZIC2_01_M00449 TRANSFAC - 40599548 40599556 6.0E-06 TGGGTGGTC 9 V_SPIB_03_M02076 TRANSFAC - 40601230 40601239 3.0E-06 AGAGGAAGTG 10 V_NF1_Q6_M00193 TRANSFAC + 40595497 40595514 1.0E-06 TCTTGGCAAACTTCCCAA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.