Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PEX6


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
5190 peroxisomal biogenesis factor 6 chr6 -42946481 - 42951981 42946981

Transcription Factor Binding Sites

 
Download all TFBS in the PEX6 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 42942846 42942859 5.0E-06 GCCAACATGTCTAT 14
SOX21_HMG_DBD_dimeric_15_1 SELEX - 42951629 42951643 2.0E-06 AGCAACTTCATTGTT 15
FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 42951506 42951513 5.0E-06 ATAAACAA 8
SOX4_HMG_DBD_dimeric_16_1 SELEX - 42951629 42951644 1.0E-06 AAGCAACTTCATTGTT 16
SOX10_HMG_full_dimeric_14_1 SELEX + 42946277 42946290 2.0E-06 TGAATCTCCAGTCC 14
SOX10_HMG_full_dimeric_14_1 SELEX + 42947231 42947244 8.0E-06 TAAATGAACAGTCA 14
ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 42943008 42943026 9.0E-06 AAGTGTCACAGAAAGGTTA 19
NFIA_NFI_full_dimeric_15_1 SELEX + 42943032 42943046 2.0E-06 TTGGCCCAGAGCCAG 15
NFIA_NFI_full_dimeric_15_1 SELEX - 42943032 42943046 9.0E-06 CTGGCTCTGGGCCAA 15
SRY_HMG_DBD_dimeric_15_1 SELEX - 42951629 42951643 4.0E-06 AGCAACTTCATTGTT 15
En1_MA0027.1 JASPAR + 42947172 42947182 2.0E-06 AAGTAATGTTC 11
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 42951505 42951516 2.0E-06 TGTATAAACAAA 12
PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 42951873 42951890 6.0E-06 GCAATTAGGGCTACTTTA 18
FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 42951506 42951516 1.0E-05 TGTATAAACAA 11
SOX8_HMG_full_dimeric_15_1 SELEX - 42951629 42951643 3.0E-06 AGCAACTTCATTGTT 15
NFIX_NFI_full_dimeric_15_2 SELEX - 42943032 42943046 5.0E-06 CTGGCTCTGGGCCAA 15
SOX8_HMG_DBD_dimeric_14_1 SELEX + 42946277 42946290 7.0E-06 TGAATCTCCAGTCC 14
SOX8_HMG_DBD_dimeric_14_1 SELEX + 42947231 42947244 5.0E-06 TAAATGAACAGTCA 14
Sox17_HMG_DBD_dimeric_15_1 SELEX - 42951629 42951643 4.0E-06 AGCAACTTCATTGTT 15
Pax4_MA0068.1 JASPAR + 42942783 42942812 7.0E-06 GAGAAATAACCACCACGTTATAACCTTCTC 30
ZNF238_C2H2_full_monomeric_13_1 SELEX - 42947509 42947521 5.0E-06 GTGCCAGATGTGC 13
POU4F3_POU_DBD_monomeric_16_1 SELEX - 42951855 42951870 5.0E-06 ATGCAAAATTGATGGA 16
RUNX3_RUNX_full_monomeric_10_1 SELEX + 42946327 42946336 1.0E-06 AAACCGCAAA 10
RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 42942879 42942887 1.0E-05 TAACCACAA 9
RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 42946327 42946335 3.0E-06 AAACCGCAA 9
Foxq1_MA0040.1 JASPAR + 42951504 42951514 9.0E-06 CTTTGTTTATA 11
OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 42951498 42951505 7.0E-06 TTAATCCT 8
FOXI1_MA0042.1 JASPAR + 42947559 42947570 4.0E-06 TTCTGTTTGTTT 12
SOX18_HMG_full_dimeric_15_1 SELEX - 42951629 42951643 1.0E-06 AGCAACTTCATTGTT 15
SOX9_HMG_full_dimeric_16_3 SELEX + 42947230 42947245 4.0E-06 ATAAATGAACAGTCAG 16
SOX7_HMG_full_dimeric_17_1 SELEX - 42951628 42951644 1.0E-06 AAGCAACTTCATTGTTG 17
MAFK_bZIP_DBD_dimeric_21_1 SELEX - 42947231 42947251 7.0E-06 AGCATGCTGACTGTTCATTTA 21
PITX1_homeodomain_full_monomeric_9_1 SELEX + 42951497 42951505 9.0E-06 CTTAATCCT 9
FEV_MA0156.1 JASPAR - 42951613 42951620 1.0E-05 CAGGAAAT 8
NFIB_NFI_full_dimeric_15_1 SELEX + 42943032 42943046 1.0E-06 TTGGCCCAGAGCCAG 15
FOXI1_forkhead_full_dimeric_17_1 SELEX - 42949812 42949828 5.0E-06 ATGTGTAGAATCAACAG 17
NR3C1_MA0113.1 JASPAR + 42945883 42945900 0.0E+00 AGAAACATTATGTTCAAA 18
NR3C1_MA0113.1 JASPAR - 42947167 42947184 3.0E-06 GAGAACATTACTTCCGTA 18
Sox11_HMG_DBD_dimeric_15_1 SELEX - 42951629 42951643 1.0E-06 AGCAACTTCATTGTT 15
ETS1_ETS_full_dimeric_18_1 SELEX - 42951604 42951621 6.0E-06 TCAGGAAATCCATCCCTT 18
GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 42947220 42947233 4.0E-06 TTATTGACTGATAA 14
FOXO3_forkhead_full_dimeric_14_1 SELEX + 42942846 42942859 9.0E-06 GCCAACATGTCTAT 14
FOXO3_forkhead_full_dimeric_14_1 SELEX - 42942846 42942859 8.0E-06 ATAGACATGTTGGC 14
FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 42943065 42943078 6.0E-06 TATTCCCACAAGAC 14
REST_MA0138.2 JASPAR + 42946773 42946793 3.0E-06 GCCAGCACCAGGCCCAGCTCC 21
IRF3_IRF_full_trimeric_21_1 SELEX - 42949766 42949786 5.0E-06 GGGGGACGGTAACGGAAAGGG 21
ETV6_ETS_full_dimeric_15_1 SELEX - 42946969 42946983 0.0E+00 ACGGAAGCGGAAGCG 15
Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 42951506 42951513 5.0E-06 ATAAACAA 8
Sox3_HMG_DBD_dimeric_17_1 SELEX + 42951628 42951644 5.0E-06 CAACAATGAAGTTGCTT 17
Sox3_HMG_DBD_dimeric_17_1 SELEX - 42951628 42951644 2.0E-06 AAGCAACTTCATTGTTG 17
Hic1_C2H2_DBD_dimeric_18_1 SELEX + 42946560 42946577 4.0E-06 GTGCCAAGCAGTGCCCAA 18
FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 42942846 42942859 7.0E-06 GCCAACATGTCTAT 14
FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 42942846 42942859 5.0E-06 ATAGACATGTTGGC 14
POU4F1_POU_DBD_monomeric_14_1 SELEX - 42951857 42951870 3.0E-06 ATGCAAAATTGATG 14
SOX9_HMG_full_dimeric_17_1 SELEX - 42951628 42951644 3.0E-06 AAGCAACTTCATTGTTG 17
V_HNF3B_01_M00131 TRANSFAC + 42947557 42947571 3.0E-06 TGTTCTGTTTGTTTT 15
V_FREAC7_01_M00293 TRANSFAC - 42951503 42951518 8.0E-06 TGTGTATAAACAAAGG 16
V_BACH2_01_M00490 TRANSFAC + 42945862 42945872 2.0E-06 CGTGAGTCACC 11
V_BTEB3_Q5_M01865 TRANSFAC - 42949760 42949772 1.0E-06 GAAAGGGAAGAGT 13
V_XFD1_01_M00267 TRANSFAC - 42951503 42951516 5.0E-06 TGTATAAACAAAGG 14
V_FOXA2_04_M02749 TRANSFAC - 42951502 42951518 8.0E-06 TGTGTATAAACAAAGGA 17
V_NRSF_Q4_M01028 TRANSFAC + 42947546 42947564 7.0E-06 GCCCTGTTCATTGTTCTGT 19
V_ZFX_01_M01593 TRANSFAC + 42946759 42946774 6.0E-06 CTGCAGGCCTCAGGGC 16
V_SOX30_03_M02804 TRANSFAC - 42947549 42947564 5.0E-06 ACAGAACAATGAACAG 16
V_SOX30_03_M02804 TRANSFAC + 42951625 42951640 1.0E-06 AGTCAACAATGAAGTT 16
V_NF1A_Q6_M02103 TRANSFAC - 42943031 42943046 3.0E-06 CTGGCTCTGGGCCAAG 16
V_NF1A_Q6_M02103 TRANSFAC - 42947514 42947529 7.0E-06 TGGGTTTTGTGCCAGA 16
V_AML3_Q6_M01856 TRANSFAC + 42942880 42942887 1.0E-05 AACCACAA 8
V_AR_Q6_01_M01996 TRANSFAC + 42945885 42945899 9.0E-06 AAACATTATGTTCAA 15
V_ISL2_01_M01328 TRANSFAC - 42947141 42947156 6.0E-06 ATAAATCCCTTAAGCA 16
V_MEIS1AHOXA9_01_M00420 TRANSFAC + 42947213 42947226 0.0E+00 TAACAGTTTATTGA 14
V_SRY_02_M00160 TRANSFAC - 42951502 42951513 1.0E-05 ATAAACAAAGGA 12
V_RP58_01_M00532 TRANSFAC + 42947508 42947519 5.0E-06 AGCACATCTGGC 12
V_RP58_01_M00532 TRANSFAC + 42951513 42951524 8.0E-06 TACACATCTGTG 12
V_FOXO3A_Q1_M01137 TRANSFAC - 42951503 42951514 5.0E-06 TATAAACAAAGG 12
V_ARNT_01_M00236 TRANSFAC - 42942791 42942806 3.0E-06 GTTATAACGTGGTGGT 16
V_EAR2_Q2_M01728 TRANSFAC + 42947153 42947166 5.0E-06 TTATCTTTGCCTTC 14
V_HNF3_Q6_01_M01012 TRANSFAC + 42947557 42947574 4.0E-06 TGTTCTGTTTGTTTTACT 18
V_FOXJ1_03_M02750 TRANSFAC - 42951501 42951516 1.0E-06 TGTATAAACAAAGGAT 16
V_STAT6_01_M00494 TRANSFAC + 42942857 42942864 7.0E-06 TATTTCCA 8
V_OCT_C_M00210 TRANSFAC + 42949824 42949836 5.0E-06 CACATTTTCATGC 13
V_PITX2_Q6_M02114 TRANSFAC - 42945850 42945859 1.0E-06 TGTAATCCCA 10
V_PITX2_Q6_M02114 TRANSFAC - 42951450 42951459 1.0E-06 TGTAATCCCA 10
V_NFAT2_01_M01748 TRANSFAC - 42942857 42942865 6.0E-06 ATGGAAATA 9
V_FOXP3_01_M01599 TRANSFAC - 42951506 42951513 5.0E-06 ATAAACAA 8
V_ZFP691_03_M02833 TRANSFAC - 42947344 42947360 4.0E-06 ACCTCAGTGCTCACAGT 17
V_NR3C1_01_M02219 TRANSFAC + 42945883 42945900 0.0E+00 AGAAACATTATGTTCAAA 18
V_NR3C1_01_M02219 TRANSFAC - 42947167 42947184 3.0E-06 GAGAACATTACTTCCGTA 18
V_CDX_Q5_M00991 TRANSFAC + 42947221 42947238 4.0E-06 TATTGACTGATAAATGAA 18
V_CDX_Q5_M00991 TRANSFAC - 42947552 42947569 1.0E-06 AACAAACAGAACAATGAA 18
V_ZFP410_03_M02832 TRANSFAC + 42951600 42951616 6.0E-06 AAGTAAGGGATGGATTT 17
V_XFD3_01_M00269 TRANSFAC - 42947217 42947230 2.0E-06 TCAGTCAATAAACT 14
V_HES1_Q2_M01009 TRANSFAC - 42942878 42942892 6.0E-06 AAGCCTTGTGGTTAT 15
V_AML2_01_M01759 TRANSFAC + 42942880 42942887 1.0E-05 AACCACAA 8
V_HOXA3_07_M02869 TRANSFAC + 42943074 42943087 4.0E-06 AAGACCTATTAGTG 14
V_HOXA3_07_M02869 TRANSFAC - 42951496 42951509 9.0E-06 ACAAAGGATTAAGA 14
V_HNF3_Q6_M00791 TRANSFAC - 42947560 42947572 1.0E-06 TAAAACAAACAGA 13
V_STAT5A_02_M00460 TRANSFAC + 42942765 42942788 4.0E-06 TTCCAAGTACCTCTATTAGAGAAA 24
V_STAT5A_02_M00460 TRANSFAC + 42947180 42947203 7.0E-06 TTCTCTTAACTATTTTTCCCCGTG 24
V_SOX_Q6_M01014 TRANSFAC + 42947552 42947564 9.0E-06 TTCATTGTTCTGT 13
V_HMX1_01_M00433 TRANSFAC - 42951579 42951588 5.0E-06 CAAGTCCGTG 10
V_SOX18_03_M02801 TRANSFAC + 42947551 42947566 9.0E-06 GTTCATTGTTCTGTTT 16
V_IRF3_06_M02871 TRANSFAC + 42951898 42951911 8.0E-06 GAAGAAAGGTGCCC 14
V_OCT1_04_M00138 TRANSFAC - 42949820 42949842 1.0E-05 GATGGAGCATGAAAATGTGTAGA 23
V_GR_Q6_M00192 TRANSFAC + 42945882 42945900 0.0E+00 TAGAAACATTATGTTCAAA 19
V_SOX12_04_M02900 TRANSFAC - 42951500 42951515 4.0E-06 GTATAAACAAAGGATT 16
V_XFD2_01_M00268 TRANSFAC - 42951503 42951516 1.0E-06 TGTATAAACAAAGG 14
V_STAT4_Q5_M02117 TRANSFAC - 42942872 42942881 4.0E-06 TTATGGGAAA 10
V_SOX11_03_M02795 TRANSFAC - 42947549 42947565 2.0E-06 AACAGAACAATGAACAG 17
V_SOX11_03_M02795 TRANSFAC - 42951499 42951515 0.0E+00 GTATAAACAAAGGATTA 17
V_MZF1_02_M00084 TRANSFAC - 42942872 42942884 5.0E-06 TGGTTATGGGAAA 13
V_SOX9_B1_M00410 TRANSFAC - 42947551 42947564 4.0E-06 ACAGAACAATGAAC 14
V_BLIMP1_Q6_M01066 TRANSFAC + 42943040 42943055 8.0E-06 GAGCCAGTGAAATGGT 16
V_FOXO1_Q5_M01216 TRANSFAC - 42951505 42951513 2.0E-06 ATAAACAAA 9
V_GLI3_01_M01596 TRANSFAC - 42946210 42946220 7.0E-06 GTGGGTGGCCC 11
V_HFH8_01_M00294 TRANSFAC + 42951504 42951516 0.0E+00 CTTTGTTTATACA 13
V_HAND1E47_01_M00222 TRANSFAC + 42951863 42951878 2.0E-06 TTTTGCATCTGCAATT 16
V_FOXL1_04_M02753 TRANSFAC - 42951502 42951518 2.0E-06 TGTGTATAAACAAAGGA 17
V_ZBTB12_04_M02928 TRANSFAC + 42951568 42951582 2.0E-06 ACCCATTAGAACACG 15
V_GATA6_01_M00462 TRANSFAC - 42947151 42947160 6.0E-06 AAAGATAAAT 10
V_DOBOX5_01_M01463 TRANSFAC + 42947144 42947160 1.0E-06 TTAAGGGATTTATCTTT 17
V_HNF1B_01_M01425 TRANSFAC + 42947180 42947196 9.0E-06 TTCTCTTAACTATTTTT 17
V_NRSF_01_M00256 TRANSFAC + 42946773 42946793 2.0E-06 GCCAGCACCAGGCCCAGCTCC 21
V_OTX2_01_M01387 TRANSFAC + 42947144 42947160 1.0E-06 TTAAGGGATTTATCTTT 17
V_SRF_01_M00152 TRANSFAC - 42951909 42951926 9.0E-06 AAGCCCTAATACGGAGGG 18
V_PITX2_Q2_M00482 TRANSFAC - 42945849 42945859 1.0E-06 TGTAATCCCAG 11
V_PITX2_Q2_M00482 TRANSFAC - 42951449 42951459 0.0E+00 TGTAATCCCAA 11
V_FOX_Q2_M00809 TRANSFAC + 42947559 42947571 1.0E-06 TTCTGTTTGTTTT 13
V_REST_02_M02256 TRANSFAC + 42946773 42946793 3.0E-06 GCCAGCACCAGGCCCAGCTCC 21
V_STAT6_02_M00500 TRANSFAC + 42951612 42951619 1.0E-05 GATTTCCT 8
V_BBX_03_M02739 TRANSFAC + 42949790 42949804 5.0E-06 CAATACAATGAATCA 15
V_BBX_03_M02739 TRANSFAC - 42949790 42949804 8.0E-06 TGATTCATTGTATTG 15
V_OCT1_06_M00162 TRANSFAC + 42949824 42949837 3.0E-06 CACATTTTCATGCT 14
V_SOX8_03_M02808 TRANSFAC + 42947549 42947565 5.0E-06 CTGTTCATTGTTCTGTT 17
V_HFH3_01_M00289 TRANSFAC + 42947559 42947571 4.0E-06 TTCTGTTTGTTTT 13
V_FOXJ2_01_M00422 TRANSFAC - 42947557 42947574 3.0E-06 AGTAAAACAAACAGAACA 18
V_SOX4_01_M01308 TRANSFAC - 42951503 42951510 1.0E-05 AACAAAGG 8
V_FOXO1_01_M00473 TRANSFAC - 42951505 42951514 2.0E-06 TATAAACAAA 10
V_PITX2_01_M01447 TRANSFAC + 42947144 42947160 0.0E+00 TTAAGGGATTTATCTTT 17
V_SOX12_03_M02796 TRANSFAC + 42947553 42947566 2.0E-06 TCATTGTTCTGTTT 14
V_SRY_05_M02917 TRANSFAC - 42947550 42947566 4.0E-06 AAACAGAACAATGAACA 17
V_CTF1_01_M01196 TRANSFAC + 42943033 42943046 8.0E-06 TGGCCCAGAGCCAG 14
V_ARP1_01_M00155 TRANSFAC + 42946428 42946443 9.0E-06 CGAGTCCCTGGGCCCA 16
V_UF1H3BETA_Q6_M01068 TRANSFAC + 42946350 42946363 4.0E-06 GGCGGGGGTGGGGG 14
V_ZFP128_04_M02932 TRANSFAC - 42947423 42947436 4.0E-06 TATATACCTATAAG 14
V_HOXD10_01_M01375 TRANSFAC - 42947213 42947229 6.0E-06 CAGTCAATAAACTGTTA 17
TLX1_NFIC_MA0119.1 JASPAR + 42943033 42943046 8.0E-06 TGGCCCAGAGCCAG 14
V_FEV_01_M02269 TRANSFAC - 42951613 42951620 1.0E-05 CAGGAAAT 8
V_STAT1_Q6_M01823 TRANSFAC - 42942872 42942881 4.0E-06 TTATGGGAAA 10
V_OTX1_01_M01366 TRANSFAC + 42947144 42947160 4.0E-06 TTAAGGGATTTATCTTT 17
V_FOXK1_03_M02752 TRANSFAC - 42951502 42951518 5.0E-06 TGTGTATAAACAAAGGA 17
V_AR_Q2_M00447 TRANSFAC + 42945884 42945898 2.0E-06 GAAACATTATGTTCA 15
V_SMAD1_01_M01590 TRANSFAC - 42947552 42947563 1.0E-05 CAGAACAATGAA 12
V_SMAD1_01_M01590 TRANSFAC - 42951502 42951513 1.0E-06 ATAAACAAAGGA 12
V_SOX9_Q4_M01284 TRANSFAC - 42951501 42951511 1.0E-06 AAACAAAGGAT 11
V_NANOG_02_M01247 TRANSFAC - 42951498 42951517 9.0E-06 GTGTATAAACAAAGGATTAA 20
V_OTX3_01_M01403 TRANSFAC - 42951494 42951510 8.0E-06 AACAAAGGATTAAGAGA 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL