Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CECR1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51816 cat eye syndrome chromosome region, candidate 1 chr22 - 17690279 - 17695779 17690779 Transcription Factor Binding Sites   Download all TFBS in the CECR1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX - 17695122 17695134 1.0E-06 TTCTAGAATATAC 13 NFIA_NFI_full_dimeric_15_1 SELEX + 17695082 17695096 6.0E-06 TTGGCAAAAGGCCAT 15 NFIA_NFI_full_dimeric_15_1 SELEX - 17695082 17695096 6.0E-06 ATGGCCTTTTGCCAA 15 HSF1_HSF_full_trimeric_13_1 SELEX - 17695122 17695134 2.0E-06 TTCTAGAATATAC 13 NFIX_NFI_full_dimeric_15_2 SELEX + 17695082 17695096 2.0E-06 TTGGCAAAAGGCCAT 15 NFIX_NFI_full_dimeric_15_2 SELEX - 17695082 17695096 2.0E-06 ATGGCCTTTTGCCAA 15 HSF4_HSF_DBD_trimeric_13_1 SELEX - 17695122 17695134 3.0E-06 TTCTAGAATATAC 13 NFIB_NFI_full_dimeric_15_1 SELEX + 17695082 17695096 5.0E-06 TTGGCAAAAGGCCAT 15 NFIB_NFI_full_dimeric_15_1 SELEX - 17695082 17695096 8.0E-06 ATGGCCTTTTGCCAA 15 V_MEQ_01_M02049 TRANSFAC - 17695106 17695114 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC + 17695104 17695123 7.0E-06 TTGTGTGTGTTTCCTTTGGT 20 V_BCL6_Q3_01_M02085 TRANSFAC - 17695127 17695136 4.0E-06 GTTTCTAGAA 10 V_NF1_Q6_01_M00806 TRANSFAC - 17695080 17695096 9.0E-06 ATGGCCTTTTGCCAACC 17 V_NF1A_Q6_M02103 TRANSFAC - 17695081 17695096 9.0E-06 ATGGCCTTTTGCCAAC 16 V_LDSPOLYA_B_M00317 TRANSFAC + 17695105 17695120 0.0E+00 TGTGTGTGTTTCCTTT 16 V_SPIB_01_M01204 TRANSFAC + 17686499 17686515 8.0E-06 CATAAAGGGAAGTAACC 17 V_RREB1_01_M00257 TRANSFAC - 17695100 17695113 5.0E-06 ACACACACAACCCC 14 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 17686506 17686520 1.0E-06 CCTGAGGTTACTTCC 15 V_HSF2_02_M01244 TRANSFAC + 17695122 17695134 2.0E-06 GTATATTCTAGAA 13 V_CTF1_01_M01196 TRANSFAC - 17695082 17695095 5.0E-06 TGGCCTTTTGCCAA 14 V_CTF1_01_M01196 TRANSFAC + 17695083 17695096 5.0E-06 TGGCAAAAGGCCAT 14 TLX1_NFIC_MA0119.1 JASPAR - 17695082 17695095 5.0E-06 TGGCCTTTTGCCAA 14 TLX1_NFIC_MA0119.1 JASPAR + 17695083 17695096 5.0E-06 TGGCAAAAGGCCAT 14 V_HSF1_Q6_01_M02017 TRANSFAC + 17695122 17695135 0.0E+00 GTATATTCTAGAAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.