Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

SYT17


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
51760 synaptotagmin XVII chr16 +19174637 - 19180137 19179637

Transcription Factor Binding Sites

 
Download all TFBS in the SYT17 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
VSX1_homeodomain_full_monomeric_11_1 SELEX + 19180382 19180392 8.0E-06 GGCTAATTGGC 11
VSX1_homeodomain_full_monomeric_11_1 SELEX - 19180383 19180393 3.0E-06 GGCCAATTAGC 11
EN2_homeodomain_full_monomeric_10_1 SELEX - 19180383 19180392 5.0E-06 GCCAATTAGC 10
RFX4_RFX_DBD_dimeric_16_1 SELEX + 19180361 19180376 3.0E-06 CGTTGCCGTGGTGACG 16
RFX4_RFX_DBD_dimeric_16_1 SELEX - 19180361 19180376 5.0E-06 CGTCACCACGGCAACG 16
YY1_C2H2_full_monomeric_11_1 SELEX - 19179966 19179976 8.0E-06 TACGCCATTTT 11
RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 19176542 19176558 1.0E-05 AGGGTAAGCTAAGTTCA 17
Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 19176542 19176559 2.0E-06 CAGGGTAAGCTAAGTTCA 18
SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 19179145 19179157 4.0E-06 ACGCAACAGGTCT 13
Rfx3_RFX_DBD_dimeric_16_1 SELEX + 19180361 19180376 2.0E-06 CGTTGCCGTGGTGACG 16
Rfx3_RFX_DBD_dimeric_16_1 SELEX - 19180361 19180376 5.0E-06 CGTCACCACGGCAACG 16
RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 19176542 19176558 5.0E-06 AGGGTAAGCTAAGTTCA 17
Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 19180410 19180419 5.0E-06 AACAGCTGCC 10
NFATC1_NFAT_full_dimeric_20_1 SELEX - 19179338 19179357 5.0E-06 GTTGGAAAAACTTTATTCCC 20
CTCF_C2H2_full_monomeric_17_1 SELEX - 19179110 19179126 8.0E-06 AGCGCCACCCAGCGTCG 17
EN1_homeodomain_DBD_monomeric_10_1 SELEX - 19180383 19180392 8.0E-06 GCCAATTAGC 10
RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 19176542 19176558 7.0E-06 AGGGTAAGCTAAGTTCA 17
Gata1_MA0035.2 JASPAR - 19176642 19176652 7.0E-06 ATAGATAAGGA 11
GBX1_homeodomain_DBD_monomeric_10_1 SELEX - 19180383 19180392 7.0E-06 GCCAATTAGC 10
MZF1_5-13_MA0057.1 JASPAR - 19179890 19179899 4.0E-06 GGAGGGGGAA 10
RFX2_RFX_DBD_dimeric_16_1 SELEX + 19180361 19180376 4.0E-06 CGTTGCCGTGGTGACG 16
RFX2_RFX_DBD_dimeric_16_1 SELEX - 19180361 19180376 4.0E-06 CGTCACCACGGCAACG 16
RFX5_RFX_DBD_dimeric_16_3 SELEX + 19180361 19180376 6.0E-06 CGTTGCCGTGGTGACG 16
RFX5_RFX_DBD_dimeric_16_3 SELEX - 19180361 19180376 2.0E-06 CGTCACCACGGCAACG 16
V_SMAD3_Q6_01_M01888 TRANSFAC + 19176516 19176528 7.0E-06 GGGCAGACACATT 13
V_STAT_Q6_M00777 TRANSFAC - 19176575 19176587 1.0E-05 CATTCTTCTTAGA 13
V_ZFP740_03_M02834 TRANSFAC - 19180236 19180251 1.0E-05 CCCCACCCCCCATTCC 16
V_GABPA_04_M02858 TRANSFAC + 19179885 19179900 3.0E-06 CTTTCTTCCCCCTCCG 16
V_AP4_Q6_01_M00927 TRANSFAC - 19180411 19180419 1.0E-05 AACAGCTGC 9
V_TCFAP2C_04_M02925 TRANSFAC + 19179075 19179088 9.0E-06 CTGCCCGTGGGCAG 14
V_TCFAP2C_04_M02925 TRANSFAC - 19179075 19179088 7.0E-06 CTGCCCACGGGCAG 14
V_CP2_02_M00947 TRANSFAC + 19179114 19179128 9.0E-06 GCTGGGTGGCGCTGC 15
V_ZFP128_03_M02828 TRANSFAC + 19179966 19179982 6.0E-06 AAAATGGCGTACATCCA 17
V_CART1_01_M00416 TRANSFAC + 19176535 19176552 2.0E-06 CAATAATTGAACTTAGCT 18
V_POLY_C_M00212 TRANSFAC + 19177003 19177020 4.0E-06 CAATAAACCCTGTGTCTC 18
V_MAZ_Q6_01_M02023 TRANSFAC + 19179803 19179816 1.0E-05 GGCGGAGGGGCGGG 14
V_YY1_Q6_02_M01035 TRANSFAC - 19179966 19179976 9.0E-06 TACGCCATTTT 11
V_GATA1_09_M02254 TRANSFAC - 19176642 19176652 7.0E-06 ATAGATAAGGA 11
V_TFIII_Q6_M00706 TRANSFAC - 19180275 19180283 6.0E-06 AGAGGGAGG 9
V_NFYC_Q5_M02107 TRANSFAC - 19180381 19180394 5.0E-06 CGGCCAATTAGCCG 14
V_ZFP281_01_M01597 TRANSFAC + 19180241 19180251 4.0E-06 GGGGGGTGGGG 11
V_UF1H3BETA_Q6_M01068 TRANSFAC - 19179252 19179265 7.0E-06 GGTGGGCGTAGGGC 14
V_GATA6_04_M02757 TRANSFAC - 19176639 19176655 2.0E-06 TTCATAGATAAGGAGTG 17
V_P300_01_M00033 TRANSFAC - 19176635 19176648 9.0E-06 ATAAGGAGTGAATC 14
V_PAX2_02_M00486 TRANSFAC + 19177004 19177012 8.0E-06 AATAAACCC 9
V_GATA1_06_M00347 TRANSFAC - 19176643 19176652 2.0E-06 ATAGATAAGG 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL