Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TPPP3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51673 tubulin polymerization-promoting protein family member 3 chr16 - 67426921 - 67432421 67427421 Transcription Factor Binding Sites   Download all TFBS in the TPPP3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 67425585 67425597 1.0E-06 TTAAACAAAAACA 13 Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX - 67431429 67431439 5.0E-06 TGGACACAAAC 11 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 67425488 67425503 5.0E-06 AAGGGTCATGAGGACC 16 SPIC_ETS_full_monomeric_14_1 SELEX - 67428952 67428965 2.0E-06 AAAAAGAGGAAGAG 14 POU3F3_POU_DBD_monomeric_12_1 SELEX - 67424618 67424629 2.0E-06 TTGCATAATTTG 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 67424618 67424630 3.0E-06 ATTGCATAATTTG 13 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 67425487 67425499 9.0E-06 TAAGGGTCATGAG 13 RFX4_RFX_DBD_dimeric_16_1 SELEX + 67430339 67430354 1.0E-06 CGTTTCCATGGAGACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 67430339 67430354 1.0E-06 CGTCTCCATGGAAACG 16 EBF1_EBF_full_dimeric_14_1 SELEX + 67431510 67431523 4.0E-06 AGTCCCTAGGGGCT 14 EBF1_EBF_full_dimeric_14_1 SELEX - 67431510 67431523 2.0E-06 AGCCCCTAGGGACT 14 POU3F4_POU_DBD_monomeric_11_1 SELEX - 67424618 67424628 2.0E-06 TGCATAATTTG 11 Esrrb_MA0141.1 JASPAR + 67427493 67427504 6.0E-06 TGACCAAGGTCA 12 KLF13_C2H2_full_monomeric_18_1 SELEX + 67429634 67429651 8.0E-06 TTAAAACACCCATTTCTG 18 SPIB_ETS_DBD_monomeric_14_1 SELEX - 67428952 67428965 1.0E-06 AAAAAGAGGAAGAG 14 Tcfcp2l1_MA0145.1 JASPAR - 67425337 67425350 4.0E-06 CCAGACAAAGCCAG 14 REL_MA0101.1 JASPAR - 67429608 67429617 9.0E-06 GGGGTTTTCC 10 RFX2_RFX_DBD_dimeric_15_1 SELEX + 67425647 67425661 4.0E-06 GGTTGCTAAGGGAGG 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 67430339 67430354 1.0E-06 CGTTTCCATGGAGACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 67430339 67430354 2.0E-06 CGTCTCCATGGAAACG 16 CEBPB_bZIP_full_dimeric_10_1 SELEX + 67424621 67424630 7.0E-06 ATTATGCAAT 10 NFATC1_NFAT_full_dimeric_14_1 SELEX + 67430340 67430353 4.0E-06 GTTTCCATGGAGAC 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 67430340 67430353 9.0E-06 GTCTCCATGGAAAC 14 SP1_MA0079.2 JASPAR + 67427563 67427572 3.0E-06 CCCCTCCCCC 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 67430313 67430326 9.0E-06 GCGACAGCTGTCCG 14 SRY_MA0084.1 JASPAR - 67429831 67429839 9.0E-06 GAAAACAAT 9 SP1_C2H2_DBD_monomeric_11_1 SELEX + 67427510 67427520 1.0E-05 GCCCCGCCCAC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 67425585 67425595 6.0E-06 TTAAACAAAAA 11 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 67424620 67424631 5.0E-06 AATTGCATAATT 12 RFX2_RFX_DBD_dimeric_16_1 SELEX + 67430339 67430354 1.0E-06 CGTTTCCATGGAGACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 67430339 67430354 1.0E-06 CGTCTCCATGGAAACG 16 POU1F1_POU_DBD_monomeric_17_1 SELEX - 67424616 67424632 4.0E-06 CAATTGCATAATTTGTG 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 67430339 67430354 3.0E-06 CGTTTCCATGGAGACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 67430339 67430354 3.0E-06 CGTCTCCATGGAAACG 16 INSM1_MA0155.1 JASPAR - 67424530 67424541 2.0E-06 TGTCAGGGGGAA 12 INSM1_MA0155.1 JASPAR + 67430418 67430429 5.0E-06 TGTTTGGGGGCA 12 POU3F1_POU_DBD_monomeric_12_2 SELEX - 67424618 67424629 5.0E-06 TTGCATAATTTG 12 Hltf_MA0109.1 JASPAR - 67424690 67424699 1.0E-06 AACCTTATAT 10 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 67425570 67425585 2.0E-06 ACAGCAAATAGTAACA 16 PPARG_MA0066.1 JASPAR + 67430643 67430662 1.0E-05 CAAGATCACTCTCCCCCACA 20 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX + 67425580 67425588 2.0E-06 TGCTGTTAA 9 SPI1_ETS_full_monomeric_14_1 SELEX - 67428952 67428965 1.0E-06 AAAAAGAGGAAGAG 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 67425585 67425597 0.0E+00 TTAAACAAAAACA 13 POU4F1_POU_DBD_monomeric_14_1 SELEX - 67424616 67424629 8.0E-06 TTGCATAATTTGTG 14 RREB1_MA0073.1 JASPAR - 67430466 67430485 6.0E-06 CAGCCACCCACCCCCACCCC 20 IRF2_MA0051.1 JASPAR - 67424562 67424579 8.0E-06 GAAAAAAGAAAGGGGAAC 18 Zfx_MA0146.1 JASPAR - 67426999 67427012 6.0E-06 GGGGCTGCGGCCTG 14 V_RUSH1A_02_M01107 TRANSFAC - 67424690 67424699 1.0E-06 AACCTTATAT 10 V_SPI1_01_M01203 TRANSFAC - 67428949 67428965 1.0E-06 AAAAAGAGGAAGAGGCG 17 V_TCF3_01_M01594 TRANSFAC + 67424567 67424579 7.0E-06 CCTTTCTTTTTTC 13 V_NFKB_Q6_01_M00774 TRANSFAC - 67423517 67423532 1.0E-05 TCCTGGGGAAGTCCAA 16 V_NFKB_Q6_01_M00774 TRANSFAC + 67429603 67429618 4.0E-06 TGCTGGGAAAACCCCA 16 V_EBF_Q6_M00977 TRANSFAC + 67429804 67429814 8.0E-06 GTCCCCAGGGA 11 V_HSF1_Q6_M01023 TRANSFAC + 67424483 67424499 2.0E-06 CTTCCAGGGCCTTCTTG 17 V_OSF2_Q6_M00731 TRANSFAC + 67424614 67424621 1.0E-05 ACCACAAA 8 V_RHOX11_01_M01347 TRANSFAC + 67425576 67425592 1.0E-06 TATTTGCTGTTAAACAA 17 V_CEBP_Q3_M00770 TRANSFAC + 67424619 67424630 1.0E-06 AAATTATGCAAT 12 V_NF1A_Q6_M02103 TRANSFAC + 67425426 67425441 6.0E-06 CTGGCTTGGGGCCAGG 16 V_HMGIY_Q3_M01010 TRANSFAC - 67428131 67428145 8.0E-06 AGGTTATTTTTCTTA 15 V_MAFB_03_M02879 TRANSFAC - 67424618 67424632 2.0E-06 CAATTGCATAATTTG 15 V_IRF_Q6_01_M00972 TRANSFAC - 67424568 67424578 5.0E-06 AAAAAAGAAAG 11 V_SRY_02_M00160 TRANSFAC - 67429828 67429839 5.0E-06 GAAAACAATTGG 12 V_IRF2_Q6_M01882 TRANSFAC - 67424565 67424580 8.0E-06 AGAAAAAAGAAAGGGG 16 V_CEBP_Q2_M00190 TRANSFAC - 67424619 67424632 1.0E-06 CAATTGCATAATTT 14 V_RFX4_03_M02789 TRANSFAC - 67425645 67425659 0.0E+00 TCCCTTAGCAACCGT 15 V_RFX4_03_M02789 TRANSFAC - 67425678 67425692 5.0E-06 GCCCTTAGCAACATT 15 V_AP2_Q6_01_M00915 TRANSFAC - 67428983 67428995 9.0E-06 GGGCCCTCAGGCT 13 V_SP1_03_M02281 TRANSFAC + 67427563 67427572 3.0E-06 CCCCTCCCCC 10 V_HFH4_01_M00742 TRANSFAC - 67425586 67425598 8.0E-06 ATGTTTTTGTTTA 13 V_GKLF_02_M01588 TRANSFAC - 67430243 67430254 7.0E-06 ACCACGCCCTTC 12 V_DLX2_01_M01468 TRANSFAC - 67429823 67429838 1.0E-06 AAAACAATTGGTTCAG 16 V_AREB6_04_M00415 TRANSFAC + 67423396 67423404 8.0E-06 CTGTTTCAT 9 V_AP4_Q6_02_M01860 TRANSFAC + 67430316 67430328 7.0E-06 ACAGCTGTCGCCA 13 V_COUPTF_Q6_M01036 TRANSFAC - 67430605 67430627 2.0E-06 GTGACTGGCCTCTGACCCCTGAC 23 V_PU1_Q4_M01172 TRANSFAC + 67428946 67428964 2.0E-06 ACGCGCCTCTTCCTCTTTT 19 V_AP4_Q6_01_M00927 TRANSFAC - 67425549 67425557 6.0E-06 ACCAGCTGC 9 V_CEBPB_01_M00109 TRANSFAC + 67424619 67424632 1.0E-06 AAATTATGCAATTG 14 V_RHOX11_02_M01384 TRANSFAC + 67425576 67425592 0.0E+00 TATTTGCTGTTAAACAA 17 V_BARBIE_01_M00238 TRANSFAC + 67430215 67430229 5.0E-06 AACAAAAGCCTGGGG 15 V_TRF1_01_M01237 TRANSFAC + 67429622 67429636 4.0E-06 GTAGGGTAAGGCTTA 15 V_ELF4_04_M02850 TRANSFAC + 67425584 67425600 4.0E-06 GTTAAACAAAAACATGA 17 V_ZNF219_01_M01122 TRANSFAC - 67430466 67430477 8.0E-06 CACCCCCACCCC 12 V_ZNF219_01_M01122 TRANSFAC + 67431540 67431551 8.0E-06 CACCCCCACCCC 12 V_ROAZ_01_M00467 TRANSFAC + 67429719 67429732 5.0E-06 GCCCCCATGGGTCT 14 V_SOX7_03_M02807 TRANSFAC - 67429822 67429843 8.0E-06 AGGGGAAAACAATTGGTTCAGA 22 V_CEBPE_Q6_M01868 TRANSFAC - 67424621 67424634 4.0E-06 CGCAATTGCATAAT 14 V_ZFP105_03_M02827 TRANSFAC + 67425584 67425598 6.0E-06 GTTAAACAAAAACAT 15 V_FKLF_Q5_M01837 TRANSFAC + 67430279 67430288 2.0E-06 GGGGTGGGAG 10 V_TCFAP2C_03_M02821 TRANSFAC + 67424578 67424592 5.0E-06 TCTCCCCCAGGGGAA 15 V_E2F1_01_M01250 TRANSFAC + 67424633 67424640 1.0E-05 CGTTTCTT 8 V_XFD3_01_M00269 TRANSFAC + 67430209 67430222 8.0E-06 TGAGGAAACAAAAG 14 V_CREL_01_M00053 TRANSFAC - 67429608 67429617 9.0E-06 GGGGTTTTCC 10 V_SP4_03_M02810 TRANSFAC - 67430257 67430273 3.0E-06 GGACCCGCCCCCATCTC 17 V_KROX_Q6_M00982 TRANSFAC - 67430466 67430479 3.0E-06 CCCACCCCCACCCC 14 V_ZBP89_Q4_M01816 TRANSFAC - 67430507 67430516 2.0E-06 TCCTCCCCCA 10 V_CEBPD_Q6_M00621 TRANSFAC - 67424620 67424631 0.0E+00 AATTGCATAATT 12 V_SP1_Q6_M00196 TRANSFAC - 67427509 67427521 8.0E-06 CGTGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC - 67427523 67427535 6.0E-06 GGAGGGCGGGGCC 13 V_RXRA_04_M02895 TRANSFAC - 67424709 67424724 0.0E+00 TCACGAAGGTCGTTCT 16 V_MAZ_Q6_01_M02023 TRANSFAC - 67427559 67427572 3.0E-06 GGGGGAGGGGCGGG 14 V_IRF_Q6_M00772 TRANSFAC + 67424564 67424578 2.0E-06 TCCCCTTTCTTTTTT 15 V_HNF1_Q6_01_M01011 TRANSFAC + 67425580 67425600 3.0E-06 TGCTGTTAAACAAAAACATGA 21 V_EGR1_04_M02848 TRANSFAC - 67429043 67429058 1.0E-06 GGTGGAGTGGGATAGA 16 V_MATH1_Q2_M01716 TRANSFAC - 67424415 67424424 3.0E-06 CCAGCTGGTG 10 V_RFXDC2_03_M02790 TRANSFAC - 67425645 67425659 1.0E-06 TCCCTTAGCAACCGT 15 V_NFE4_Q5_M02105 TRANSFAC - 67423424 67423435 4.0E-06 CCCCCTCTCCAC 12 V_NFE4_Q5_M02105 TRANSFAC - 67430560 67430571 5.0E-06 ACCCCTCTCCAG 12 V_SPIB_01_M01204 TRANSFAC - 67428949 67428965 3.0E-06 AAAAAGAGGAAGAGGCG 17 V_RREB1_01_M00257 TRANSFAC - 67430467 67430480 7.0E-06 ACCCACCCCCACCC 14 V_HNF4_DR1_Q3_M00764 TRANSFAC + 67429650 67429662 8.0E-06 TGGCCCTTGCCCC 13 V_CTCF_02_M01259 TRANSFAC - 67424411 67424430 4.0E-06 CATCTGCCAGCTGGTGGCAG 20 V_CTCF_01_M01200 TRANSFAC - 67424409 67424428 9.0E-06 TCTGCCAGCTGGTGGCAGGC 20 V_INSM1_01_M02268 TRANSFAC - 67424530 67424541 2.0E-06 TGTCAGGGGGAA 12 V_INSM1_01_M02268 TRANSFAC + 67430418 67430429 5.0E-06 TGTTTGGGGGCA 12 V_SF1_Q6_01_M01132 TRANSFAC - 67427496 67427504 7.0E-06 TGACCTTGG 9 V_GATA4_Q3_M00632 TRANSFAC - 67424569 67424580 4.0E-06 AGAAAAAAGAAA 12 V_SP4_Q5_M01273 TRANSFAC + 67427510 67427520 9.0E-06 GCCCCGCCCAC 11 V_SP4_Q5_M01273 TRANSFAC + 67427562 67427572 5.0E-06 GCCCCTCCCCC 11 V_ELF1_Q6_M00746 TRANSFAC - 67428953 67428964 1.0E-06 AAAAGAGGAAGA 12 V_SOX15_03_M02799 TRANSFAC - 67429825 67429841 6.0E-06 GGGAAAACAATTGGTTC 17 V_MTF1_06_M02882 TRANSFAC + 67428128 67428141 3.0E-06 CTTTAAGAAAAATA 14 V_LBP9_01_M01592 TRANSFAC + 67425503 67425519 1.0E-06 CCAGCAAGAGCCAGTCT 17 V_CEBPA_01_M00116 TRANSFAC - 67424619 67424632 3.0E-06 CAATTGCATAATTT 14 V_E2F6_01_M01252 TRANSFAC + 67424633 67424640 1.0E-05 CGTTTCTT 8 V_ERR2_01_M01589 TRANSFAC + 67427496 67427507 1.0E-06 CCAAGGTCACGC 12 V_RHOX11_05_M03099 TRANSFAC + 67425576 67425592 0.0E+00 TATTTGCTGTTAAACAA 17 V_RBPJK_01_M01112 TRANSFAC - 67424639 67424649 2.0E-06 AACGTGGGAAA 11 V_TBX15_02_M01264 TRANSFAC - 67428923 67428940 9.0E-06 AAGTGCGAACGTCTGAGA 18 V_PBX1_03_M01017 TRANSFAC + 67427093 67427104 8.0E-06 TCATCAATCAGC 12 V_NFAT2_02_M01749 TRANSFAC - 67430341 67430351 1.0E-06 CTCCATGGAAA 11 V_NFAT2_02_M01749 TRANSFAC + 67430342 67430352 5.0E-06 TTCCATGGAGA 11 V_ZFP281_01_M01597 TRANSFAC - 67427563 67427573 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 67430507 67430517 9.0E-06 TGGGGGAGGAG 11 V_CEBPB_Q6_M01896 TRANSFAC + 67424622 67424631 2.0E-06 TTATGCAATT 10 V_IRF1_Q6_01_M01881 TRANSFAC + 67424566 67424579 9.0E-06 CCCTTTCTTTTTTC 14 V_TCFAP2A_03_M02819 TRANSFAC + 67424578 67424592 5.0E-06 TCTCCCCCAGGGGAA 15 V_ZFP281_04_M02831 TRANSFAC - 67430468 67430482 6.0E-06 CCACCCACCCCCACC 15 V_SRF_06_M02916 TRANSFAC + 67425584 67425600 1.0E-06 GTTAAACAAAAACATGA 17 V_FOXJ2_01_M00422 TRANSFAC - 67425571 67425588 9.0E-06 TTAACAGCAAATAGTAAC 18 V_ERR1_Q2_01_M02093 TRANSFAC + 67427497 67427507 1.0E-06 CAAGGTCACGC 11 V_RFX3_04_M02788 TRANSFAC - 67425641 67425663 3.0E-06 ACCCTCCCTTAGCAACCGTCTCC 23 V_RFX3_04_M02788 TRANSFAC - 67425674 67425696 9.0E-06 TCCTGCCCTTAGCAACATTCTCC 23 V_BSX_01_M01442 TRANSFAC - 67429823 67429838 1.0E-06 AAAACAATTGGTTCAG 16 V_CTF1_01_M01196 TRANSFAC - 67425426 67425439 4.0E-06 TGGCCCCAAGCCAG 14 V_ARP1_01_M00155 TRANSFAC - 67430779 67430794 5.0E-06 TCAGCTTCTGAGACCT 16 V_HIF1_Q5_M00466 TRANSFAC + 67431908 67431919 6.0E-06 TGTACGTGGGGT 12 V_UF1H3BETA_Q6_M01068 TRANSFAC - 67427562 67427575 0.0E+00 TGCGGGGGAGGGGC 14 V_CEBP_Q2_01_M00912 TRANSFAC - 67424619 67424630 0.0E+00 ATTGCATAATTT 12 V_SP1_Q4_01_M00932 TRANSFAC - 67427509 67427521 4.0E-06 CGTGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 67427523 67427535 5.0E-06 GGAGGGCGGGGCC 13 V_BARX1_01_M01340 TRANSFAC - 67429823 67429838 5.0E-06 AAAACAATTGGTTCAG 16 V_CEBPE_01_M01772 TRANSFAC + 67424621 67424630 2.0E-06 ATTATGCAAT 10 V_RHOX11_06_M03100 TRANSFAC + 67425576 67425592 1.0E-06 TATTTGCTGTTAAACAA 17 TLX1_NFIC_MA0119.1 JASPAR - 67425426 67425439 4.0E-06 TGGCCCCAAGCCAG 14 V_SMAD1_01_M01590 TRANSFAC - 67424566 67424577 3.0E-06 AAAAAGAAAGGG 12 V_DMRT5_01_M01150 TRANSFAC - 67430380 67430394 1.0E-06 TGCTGTTACAGTGTC 15 V_CEBPA_Q6_M01866 TRANSFAC + 67424619 67424631 0.0E+00 AAATTATGCAATT 13 V_T3RALPHA_Q6_M01724 TRANSFAC - 67431557 67431567 5.0E-06 CCTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.