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CDK5RAP1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51654 CDK5 regulatory subunit associated protein 1 chr20 - 31988837 - 31994337 31989337 Transcription Factor Binding Sites   Download all TFBS in the CDK5RAP1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Pax6_MA0069.1 JASPAR + 31990025 31990038 6.0E-06 TTCACGCTCTATTT 14 SPIC_ETS_full_monomeric_14_1 SELEX - 31990069 31990082 3.0E-06 TGAATCAGGAAGTC 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 31989851 31989867 2.0E-06 AAATTAAAAAAATTTTA 17 POU3F3_POU_DBD_monomeric_12_1 SELEX + 31992349 31992360 3.0E-06 ATGAATAAATGA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 31992348 31992360 3.0E-06 AATGAATAAATGA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX - 31987663 31987675 9.0E-06 AGACAACAAATAA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX + 31992350 31992360 9.0E-06 TGAATAAATGA 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 31992219 31992229 6.0E-06 TAAGAAAATAA 11 Pax4_MA0068.1 JASPAR + 31988725 31988754 4.0E-06 GGATAATAGCACCTATCTCCATAAGCCTAC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 31987855 31987868 6.0E-06 AAAAAAAGGAAATG 14 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 31990068 31990081 2.0E-06 GAATCAGGAAGTCA 14 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX - 31989860 31989869 9.0E-06 AAAAATTAAA 10 Gata1_MA0035.2 JASPAR - 31992224 31992234 6.0E-06 AATGATAAGAA 11 POU1F1_POU_DBD_monomeric_17_1 SELEX + 31992346 31992362 6.0E-06 TGAATGAATAAATGACT 17 POU3F1_POU_DBD_monomeric_12_2 SELEX + 31992349 31992360 2.0E-06 ATGAATAAATGA 12 ETS1_ETS_full_dimeric_18_1 SELEX + 31989368 31989385 1.0E-06 AACGGAAGTGCTTCCTTT 18 ETS1_ETS_full_dimeric_18_1 SELEX - 31989368 31989385 0.0E+00 AAAGGAAGCACTTCCGTT 18 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 31989033 31989051 0.0E+00 GTGACCTGTCCAAGGTCAC 19 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 31989033 31989051 0.0E+00 GTGACCTTGGACAGGTCAC 19 IRF3_IRF_full_trimeric_21_1 SELEX + 31987855 31987875 0.0E+00 AAAAAAAGGAAATGGAATGCA 21 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 31992216 31992228 3.0E-06 AAGAAAATAAGTA 13 TP63_p53l_DBD_dimeric_18_1 SELEX + 31992265 31992282 2.0E-06 GACACGTCGTGTCTTGTT 18 TP63_p53l_DBD_dimeric_18_1 SELEX - 31992265 31992282 9.0E-06 AACAAGACACGACGTGTC 18 POU4F1_POU_DBD_monomeric_14_1 SELEX + 31992349 31992362 8.0E-06 ATGAATAAATGACT 14 V_FOXP1_01_M00987 TRANSFAC + 31989856 31989875 2.0E-06 TTTTTTTAATTTTTTTGTAG 20 V_HNF3B_01_M00131 TRANSFAC + 31992215 31992229 1.0E-06 TTACTTATTTTCTTA 15 V_SPI1_01_M01203 TRANSFAC + 31987855 31987871 1.0E-05 AAAAAAAGGAAATGGAA 17 V_DBX1_01_M01483 TRANSFAC + 31987679 31987695 0.0E+00 CAACAAATTAAAAAATA 17 V_DBX1_01_M01483 TRANSFAC - 31989855 31989871 0.0E+00 AAAAAAATTAAAAAAAT 17 V_FLI1_Q6_M01208 TRANSFAC - 31990067 31990077 1.0E-06 CAGGAAGTCAT 11 V_EVI1_05_M00082 TRANSFAC - 31992222 31992232 5.0E-06 TGATAAGAAAA 11 V_GATA2_02_M00348 TRANSFAC - 31992225 31992234 3.0E-06 AATGATAAGA 10 V_HMGIY_Q3_M01010 TRANSFAC - 31987678 31987692 7.0E-06 TTTTTAATTTGTTGT 15 V_HMGIY_Q3_M01010 TRANSFAC + 31989858 31989872 3.0E-06 TTTTTAATTTTTTTG 15 V_HMGIY_Q3_M01010 TRANSFAC + 31989859 31989873 3.0E-06 TTTTAATTTTTTTGT 15 V_EVI1_04_M00081 TRANSFAC - 31989857 31989871 8.0E-06 AAAAAAATTAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 31992223 31992237 4.0E-06 GGCAATGATAAGAAA 15 V_BCL6_01_M01183 TRANSFAC - 31989852 31989867 8.0E-06 AAATTAAAAAAATTTT 16 V_BCL6_01_M01183 TRANSFAC + 31989855 31989870 1.0E-06 ATTTTTTTAATTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 31989856 31989871 0.0E+00 TTTTTTTAATTTTTTT 16 V_OCT1_Q5_01_M00930 TRANSFAC + 31988786 31988796 4.0E-06 TGCTTTGCATA 11 V_OCT1_Q5_01_M00930 TRANSFAC - 31992333 31992343 6.0E-06 AAATTTTCATT 11 V_IRF2_Q6_M01882 TRANSFAC + 31987855 31987870 7.0E-06 AAAAAAAGGAAATGGA 16 V_POU1F1_Q6_M00744 TRANSFAC + 31992349 31992358 0.0E+00 ATGAATAAAT 10 V_FOXO3A_Q1_M01137 TRANSFAC - 31992216 31992227 9.0E-06 AGAAAATAAGTA 12 V_GATA_C_M00203 TRANSFAC - 31992222 31992232 5.0E-06 TGATAAGAAAA 11 V_GKLF_02_M01588 TRANSFAC + 31989839 31989850 7.0E-06 ACCACGCCCAGC 12 V_OCT_C_M00210 TRANSFAC + 31988785 31988797 3.0E-06 ATGCTTTGCATAA 13 V_HOXC6_01_M01406 TRANSFAC - 31989856 31989872 6.0E-06 CAAAAAAATTAAAAAAA 17 V_PITX2_Q6_M02114 TRANSFAC + 31987726 31987735 1.0E-06 TGTAATCCCA 10 V_LHX3_01_M01471 TRANSFAC + 31987678 31987694 3.0E-06 ACAACAAATTAAAAAAT 17 V_PU1_Q4_M01172 TRANSFAC - 31987856 31987874 0.0E+00 GCATTCCATTTCCTTTTTT 19 V_ATF4_Q2_M00514 TRANSFAC + 31989092 31989103 5.0E-06 CCTGACGCCAGG 12 V_TCFAP2E_04_M02926 TRANSFAC - 31989854 31989867 1.0E-06 AAATTAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 31989855 31989868 8.0E-06 AAAATTAAAAAAAT 14 V_PAX6_02_M01391 TRANSFAC - 31987677 31987692 7.0E-06 TTTTTAATTTGTTGTA 16 V_ETS_Q4_M00771 TRANSFAC + 31990066 31990077 3.0E-06 AATGACTTCCTG 12 V_TRF1_01_M01237 TRANSFAC + 31987909 31987923 9.0E-06 ATAGGGTTTGTGTTC 15 V_ELF4_04_M02850 TRANSFAC + 31987850 31987866 9.0E-06 TCTCAAAAAAAAGGAAA 17 V_ELF4_04_M02850 TRANSFAC - 31989860 31989876 5.0E-06 TCTACAAAAAAATTAAA 17 V_ELF4_04_M02850 TRANSFAC - 31989862 31989878 1.0E-06 TCTCTACAAAAAAATTA 17 V_DBX2_01_M01360 TRANSFAC + 31989856 31989871 4.0E-06 TTTTTTTAATTTTTTT 16 V_LMX1_01_M01409 TRANSFAC + 31987678 31987694 6.0E-06 ACAACAAATTAAAAAAT 17 V_LMX1_01_M01409 TRANSFAC - 31989856 31989872 7.0E-06 CAAAAAAATTAAAAAAA 17 V_ZFP105_03_M02827 TRANSFAC - 31989855 31989869 1.0E-06 AAAAATTAAAAAAAT 15 V_CART1_01_M00416 TRANSFAC + 31992329 31992346 8.0E-06 GCTTAATGAAAATTTGTT 18 V_HNF1_Q6_M00790 TRANSFAC + 31990061 31990078 4.0E-06 AGGTTAATGACTTCCTGA 18 V_NKX61_01_M00424 TRANSFAC + 31989858 31989870 0.0E+00 TTTTTAATTTTTT 13 V_OCT1_05_M00161 TRANSFAC + 31988785 31988798 2.0E-06 ATGCTTTGCATAAC 14 V_HNF1_Q6_01_M01011 TRANSFAC - 31989856 31989876 1.0E-05 TCTACAAAAAAATTAAAAAAA 21 V_NKX52_01_M01315 TRANSFAC + 31987678 31987694 1.0E-06 ACAACAAATTAAAAAAT 17 V_ELF5_01_M01197 TRANSFAC + 31987858 31987868 6.0E-06 AAAAGGAAATG 11 V_XBP1_02_M01770 TRANSFAC + 31992262 31992272 8.0E-06 AGGGACACGTC 11 V_IRF3_06_M02871 TRANSFAC - 31988731 31988744 4.0E-06 GGAGATAGGTGCTA 14 V_OCT1_04_M00138 TRANSFAC - 31989851 31989873 1.0E-06 ACAAAAAAATTAAAAAAATTTTA 23 V_OCT1_08_M01354 TRANSFAC + 31989856 31989871 8.0E-06 TTTTTTTAATTTTTTT 16 V_HBP1_03_M02762 TRANSFAC + 31992342 31992357 0.0E+00 TTGTTGAATGAATAAA 16 V_HBP1_03_M02762 TRANSFAC + 31992346 31992361 6.0E-06 TGAATGAATAAATGAC 16 V_PIT1_01_M01465 TRANSFAC - 31989854 31989870 9.0E-06 AAAAAATTAAAAAAATT 17 V_ZBRK1_01_M01105 TRANSFAC + 31987775 31987789 7.0E-06 GGGAGGCAGAGATTG 15 V_SPIB_01_M01204 TRANSFAC - 31990066 31990082 5.0E-06 TGAATCAGGAAGTCATT 17 V_GATA1_09_M02254 TRANSFAC - 31992224 31992234 6.0E-06 AATGATAAGAA 11 V_AP1_C_M00199 TRANSFAC - 31992314 31992322 3.0E-06 ATGAGTCAG 9 V_OCAB_Q6_M02113 TRANSFAC - 31987886 31987896 9.0E-06 ATATGCAAGGC 11 V_OCAB_Q6_M02113 TRANSFAC - 31988787 31988797 6.0E-06 TTATGCAAAGC 11 V_NKX3A_01_M00451 TRANSFAC - 31992213 31992224 8.0E-06 AAATAAGTAATG 12 V_NCX_02_M01420 TRANSFAC + 31987679 31987695 0.0E+00 CAACAAATTAAAAAATA 17 V_NCX_02_M01420 TRANSFAC - 31989855 31989871 0.0E+00 AAAAAAATTAAAAAAAT 17 V_AP1_01_M00517 TRANSFAC - 31992312 31992324 6.0E-06 CTATGAGTCAGAC 13 V_OCT1_B_M00342 TRANSFAC - 31988787 31988796 7.0E-06 TATGCAAAGC 10 V_OCT_Q6_M00795 TRANSFAC + 31988786 31988796 6.0E-06 TGCTTTGCATA 11 V_LIM1_01_M01418 TRANSFAC + 31987678 31987694 5.0E-06 ACAACAAATTAAAAAAT 17 V_TFIII_Q6_M00706 TRANSFAC - 31989129 31989137 6.0E-06 AGAGGGAGG 9 V_HBP1_04_M02866 TRANSFAC - 31987901 31987917 2.0E-06 AAACCCTATTGTGAACT 17 V_ZFP105_04_M02931 TRANSFAC - 31992337 31992353 8.0E-06 TTCATTCAACAAATTTT 17 V_FXR_IR1_Q6_M00767 TRANSFAC + 31990061 31990073 9.0E-06 AGGTTAATGACTT 13 V_MTF1_06_M02882 TRANSFAC - 31989854 31989867 8.0E-06 AAATTAAAAAAATT 14 V_MTF1_06_M02882 TRANSFAC - 31989856 31989869 1.0E-06 AAAAATTAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 31992219 31992232 8.0E-06 TGATAAGAAAATAA 14 V_POU5F1_01_M01307 TRANSFAC + 31988765 31988774 2.0E-06 AATGCAATAA 10 V_TAL1_01_M01591 TRANSFAC + 31992222 31992234 1.0E-05 TTTTCTTATCATT 13 V_IPF1_05_M01255 TRANSFAC - 31989858 31989869 0.0E+00 AAAAATTAAAAA 12 V_MYOD_Q6_01_M00929 TRANSFAC - 31988686 31988703 7.0E-06 TTAAGACAGGTGCCTAAG 18 V_HNF1_01_M00132 TRANSFAC + 31990062 31990076 9.0E-06 GGTTAATGACTTCCT 15 V_BARHL1_01_M01332 TRANSFAC + 31987677 31987692 8.0E-06 TACAACAAATTAAAAA 16 V_AP1FJ_Q2_M00172 TRANSFAC - 31990007 31990017 6.0E-06 GGTGACTTAAA 11 V_OCT1_Q6_M00195 TRANSFAC - 31988785 31988799 8.0E-06 CGTTATGCAAAGCAT 15 V_LUN1_01_M00480 TRANSFAC + 31987731 31987747 3.0E-06 TCCCAGCAACTTGGGAA 17 V_PXR_Q2_M00964 TRANSFAC + 31990060 31990071 4.0E-06 TAGGTTAATGAC 12 V_GATA6_01_M00462 TRANSFAC - 31992225 31992234 1.0E-06 AATGATAAGA 10 V_LMX1B_01_M01363 TRANSFAC - 31987678 31987694 5.0E-06 ATTTTTTAATTTGTTGT 17 V_PITX2_Q2_M00482 TRANSFAC + 31987726 31987736 1.0E-06 TGTAATCCCAG 11 V_FOX_Q2_M00809 TRANSFAC + 31987661 31987673 5.0E-06 GTTTATTTGTTGT 13 V_BBX_03_M02739 TRANSFAC + 31992342 31992356 6.0E-06 TTGTTGAATGAATAA 15 V_BBX_03_M02739 TRANSFAC - 31992342 31992356 3.0E-06 TTATTCATTCAACAA 15 V_SRF_06_M02916 TRANSFAC + 31987849 31987865 1.0E-05 GTCTCAAAAAAAAGGAA 17 V_SRF_06_M02916 TRANSFAC - 31989859 31989875 8.0E-06 CTACAAAAAAATTAAAA 17 V_HFH3_01_M00289 TRANSFAC + 31987661 31987673 9.0E-06 GTTTATTTGTTGT 13 V_SOX1_03_M02802 TRANSFAC - 31989855 31989870 9.0E-06 AAAAAATTAAAAAAAT 16 V_SOX1_03_M02802 TRANSFAC - 31992340 31992355 9.0E-06 TATTCATTCAACAAAT 16 V_PAX4_02_M00377 TRANSFAC - 31989860 31989870 5.0E-06 AAAAAATTAAA 11 V_PITX2_01_M01447 TRANSFAC + 31992323 31992339 9.0E-06 AGAAGGGCTTAATGAAA 17 V_LHX5_01_M01353 TRANSFAC + 31987678 31987694 9.0E-06 ACAACAAATTAAAAAAT 17 V_HMX3_02_M01413 TRANSFAC + 31987678 31987694 0.0E+00 ACAACAAATTAAAAAAT 17 V_HOXD10_01_M01375 TRANSFAC + 31988765 31988781 8.0E-06 AATGCAATAATACAAGC 17 V_PAX6_01_M00097 TRANSFAC + 31990021 31990041 9.0E-06 GAGGTTCACGCTCTATTTCTA 21 V_ETV3_02_M02068 TRANSFAC + 31989368 31989377 9.0E-06 AACGGAAGTG 10 V_HOXC9_01_M01416 TRANSFAC - 31990060 31990075 1.0E-06 GGAAGTCATTAACCTA 16 V_TCF11_01_M00285 TRANSFAC - 31992349 31992361 3.0E-06 GTCATTTATTCAT 13

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