Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C14orf166 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51637 chromosome 14 open reading frame 166 chr14 + 52451227 - 52456727 52456227 Transcription Factor Binding Sites   Download all TFBS in the C14orf166 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 52455940 52455948 1.0E-06 GTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 52455940 52455949 1.0E-06 GTAATAAAAT 10 MESP1_bHLH_DBD_dimeric_10_1 SELEX + 52455919 52455928 9.0E-06 AGCACCTGTT 10 EVX2_homeodomain_DBD_monomeric_10_1 SELEX - 52456766 52456775 1.0E-05 CATAATTAGC 10 SOX10_HMG_full_dimeric_16_1 SELEX - 52455966 52455981 9.0E-06 ATTACTGTTTAGTGTT 16 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 52460301 52460318 5.0E-06 ACACTTTTGATGCAATTA 18 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 52455940 52455949 2.0E-06 GTAATAAAAT 10 VSX2_homeodomain_DBD_monomeric_8_1 SELEX + 52456767 52456774 5.0E-06 CTAATTAT 8 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 52456766 52456775 6.0E-06 CATAATTAGC 10 SPIC_ETS_full_monomeric_14_1 SELEX + 52460226 52460239 0.0E+00 AAAATGAGGAAGTT 14 TEF_bZIP_DBD_dimeric_12_1 SELEX - 52460294 52460305 6.0E-06 AATTATATAACC 12 HLF_bZIP_full_dimeric_12_1 SELEX - 52460294 52460305 3.0E-06 AATTATATAACC 12 EWSR1-FLI1_MA0149.1 JASPAR + 52456048 52456065 2.0E-06 GCAAGAAAGAAAGGAAAG 18 EWSR1-FLI1_MA0149.1 JASPAR + 52456052 52456069 8.0E-06 GAAAGAAAGGAAAGTGGC 18 DBP_bZIP_full_dimeric_12_1 SELEX + 52460294 52460305 8.0E-06 GGTTATATAATT 12 DBP_bZIP_full_dimeric_12_1 SELEX - 52460294 52460305 6.0E-06 AATTATATAACC 12 Pax4_MA0068.1 JASPAR - 52460229 52460258 0.0E+00 AAAAAAAATAGAATACGACAACTTCCTCAT 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 52460226 52460239 0.0E+00 AAAATGAGGAAGTT 14 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 52460186 52460197 8.0E-06 TGGCAAGTGTCA 12 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 52455939 52455948 0.0E+00 AGTAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 52455940 52455948 1.0E-06 GTAATAAAA 9 Foxq1_MA0040.1 JASPAR - 52455969 52455979 7.0E-06 TACTGTTTAGT 11 Foxq1_MA0040.1 JASPAR + 52456114 52456124 2.0E-06 TAAAGTTTATT 11 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 52455940 52455949 4.0E-06 GTAATAAAAT 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 52455939 52455949 1.0E-06 AGTAATAAAAT 11 HIC2_C2H2_DBD_monomeric_9_1 SELEX - 52456178 52456186 1.0E-05 ATGCCCACC 9 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 52460301 52460311 7.0E-06 TGATGCAATTA 11 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 52460301 52460318 4.0E-06 ACACTTTTGATGCAATTA 18 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 52460300 52460312 9.0E-06 TTGATGCAATTAT 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 52460300 52460312 8.0E-06 TTGATGCAATTAT 13 TBX21_TBX_full_dimeric_19_1 SELEX - 52460179 52460197 5.0E-06 TGACACTTGCCAAGGGTTA 19 HLF_MA0043.1 JASPAR + 52460294 52460305 4.0E-06 GGTTATATAATT 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 52455940 52455949 6.0E-06 GTAATAAAAT 10 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 52460301 52460311 9.0E-06 TGATGCAATTA 11 SPI1_ETS_full_monomeric_14_1 SELEX + 52460226 52460239 0.0E+00 AAAATGAGGAAGTT 14 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 52460301 52460318 4.0E-06 ACACTTTTGATGCAATTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 52455939 52455949 0.0E+00 AGTAATAAAAT 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 52460249 52460261 9.0E-06 AAGAAAAAAAATA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 52455940 52455948 1.0E-06 GTAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 52455940 52455948 1.0E-06 GTAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 52455939 52455949 0.0E+00 AGTAATAAAAT 11 TCF3_bHLH_DBD_dimeric_10_1 SELEX + 52455919 52455928 7.0E-06 AGCACCTGTT 10 V_HOXA9_01_M01351 TRANSFAC + 52455937 52455953 1.0E-06 GGAGTAATAAAATGAAT 17 V_AP2ALPHA_Q6_M01857 TRANSFAC + 52456533 52456543 6.0E-06 AGCCTCCGGGC 11 V_SPI1_01_M01203 TRANSFAC + 52460226 52460242 0.0E+00 AAAATGAGGAAGTTGTC 17 V_GEN_INI_B_M00315 TRANSFAC - 52460227 52460234 1.0E-05 CCTCATTT 8 V_MYOD_Q6_M00184 TRANSFAC + 52455919 52455928 7.0E-06 AGCACCTGTT 10 V_SOX14_05_M02902 TRANSFAC + 52456897 52456911 7.0E-06 AGTACACAATGAAAT 15 V_DMRT3_01_M01148 TRANSFAC - 52460301 52460315 8.0E-06 CTTTTGATGCAATTA 15 V_NF1_Q6_01_M00806 TRANSFAC - 52460183 52460199 6.0E-06 ATTGACACTTGCCAAGG 17 V_ZFX_01_M01593 TRANSFAC - 52456319 52456334 3.0E-06 CCCCGGGCCTCGGCCG 16 V_ACAAT_B_M00309 TRANSFAC + 52456174 52456182 8.0E-06 GATTGGTGG 9 V_HMGIY_Q3_M01010 TRANSFAC + 52460244 52460258 2.0E-06 TATTCTATTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC - 52460244 52460258 4.0E-06 AAAAAAAATAGAATA 15 V_CEBP_Q2_M00190 TRANSFAC + 52460301 52460314 6.0E-06 TAATTGCATCAAAA 14 V_IRF3_05_M02767 TRANSFAC + 52456054 52456067 4.0E-06 AAGAAAGGAAAGTG 14 V_HNF3_Q6_01_M01012 TRANSFAC + 52460244 52460261 8.0E-06 TATTCTATTTTTTTTCTT 18 V_DLX2_01_M01468 TRANSFAC - 52460295 52460310 4.0E-06 GATGCAATTATATAAC 16 V_DLX2_01_M01468 TRANSFAC + 52460297 52460312 9.0E-06 TATATAATTGCATCAA 16 V_PU1_Q4_M01172 TRANSFAC - 52460227 52460245 1.0E-06 TACGACAACTTCCTCATTT 19 V_TCFAP2E_04_M02926 TRANSFAC - 52460249 52460262 1.0E-06 TAAGAAAAAAAATA 14 V_TCFAP2E_04_M02926 TRANSFAC - 52460250 52460263 5.0E-06 TTAAGAAAAAAAAT 14 V_ELF4_04_M02850 TRANSFAC - 52460249 52460265 7.0E-06 TCTTAAGAAAAAAAATA 17 V_GEN_INI3_B_M00314 TRANSFAC - 52460227 52460234 1.0E-05 CCTCATTT 8 V_SPI1_03_M02078 TRANSFAC + 52460230 52460239 6.0E-06 TGAGGAAGTT 10 V_BEL1_B_M00312 TRANSFAC - 52458650 52458677 5.0E-06 AATTAGCTGACACTACAGACACAGGCCA 28 V_E4BP4_01_M00045 TRANSFAC - 52460294 52460305 1.0E-05 AATTATATAACC 12 V_NKX31_02_M02782 TRANSFAC + 52460265 52460281 4.0E-06 ATGATACACTTAAATGT 17 V_HOXB9_01_M01426 TRANSFAC + 52455937 52455952 1.0E-06 GGAGTAATAAAATGAA 16 V_SP1_Q6_M00196 TRANSFAC - 52456148 52456160 8.0E-06 GGGAGGCGGGGCC 13 V_CDX2_01_M01449 TRANSFAC + 52455936 52455951 0.0E+00 AGGAGTAATAAAATGA 16 V_E47_02_M00071 TRANSFAC - 52455916 52455931 2.0E-06 CATAACAGGTGCTCTT 16 V_E47_02_M00071 TRANSFAC - 52456756 52456771 0.0E+00 ATTAGCAGGTGCTCAA 16 V_IRF_Q6_M00772 TRANSFAC - 52456055 52456069 4.0E-06 GCCACTTTCCTTTCT 15 V_TATA_C_M00216 TRANSFAC + 52460221 52460230 3.0E-06 TCTATAAAAT 10 V_ASCL2_03_M02737 TRANSFAC - 52456755 52456771 6.0E-06 ATTAGCAGGTGCTCAAG 17 V_ASCL2_03_M02737 TRANSFAC + 52456756 52456772 1.0E-06 TTGAGCACCTGCTAATT 17 V_ELF5_01_M01197 TRANSFAC + 52460229 52460239 6.0E-06 ATGAGGAAGTT 11 V_HOX13_01_M00023 TRANSFAC - 52458660 52458689 8.0E-06 CCTCAGCCTCCCAATTAGCTGACACTACAG 30 V_CDX1_01_M01373 TRANSFAC + 52455936 52455951 0.0E+00 AGGAGTAATAAAATGA 16 V_HBP1_03_M02762 TRANSFAC + 52455945 52455960 0.0E+00 AAAATGAATGAATGCA 16 V_SOX12_04_M02900 TRANSFAC + 52456896 52456911 2.0E-06 CAGTACACAATGAAAT 16 V_SPIB_01_M01204 TRANSFAC + 52460226 52460242 0.0E+00 AAAATGAGGAAGTTGTC 17 V_HFH1_01_M00129 TRANSFAC + 52456114 52456125 0.0E+00 TAAAGTTTATTT 12 V_NKX3A_01_M00451 TRANSFAC - 52460268 52460279 4.0E-06 ATTTAAGTGTAT 12 V_MAFK_Q3_M02022 TRANSFAC - 52456805 52456815 1.0E-06 TTACTCAGCAC 11 V_VBP_01_M00228 TRANSFAC + 52460295 52460304 4.0E-06 GTTATATAAT 10 V_ELF1_Q6_M00746 TRANSFAC + 52460227 52460238 3.0E-06 AAATGAGGAAGT 12 V_HBP1_04_M02866 TRANSFAC - 52456897 52456913 8.0E-06 TGATTTCATTGTGTACT 17 V_MTF1_06_M02882 TRANSFAC - 52460249 52460262 9.0E-06 TAAGAAAAAAAATA 14 V_MTF1_06_M02882 TRANSFAC - 52460252 52460265 2.0E-06 TCTTAAGAAAAAAA 14 V_POU6F1_02_M01462 TRANSFAC - 52456762 52456778 6.0E-06 GCCCATAATTAGCAGGT 17 V_TAL1_01_M01591 TRANSFAC + 52456669 52456681 2.0E-06 CTACCTTCTCTGT 13 V_CPHX_01_M01478 TRANSFAC + 52460300 52460313 2.0E-06 ATAATTGCATCAAA 14 V_GEN_INI2_B_M00313 TRANSFAC - 52460227 52460234 1.0E-05 CCTCATTT 8 V_ZBTB4_04_M02929 TRANSFAC - 52455900 52455915 3.0E-06 CTAACACTGGTAATAC 16 V_SPIC_02_M02077 TRANSFAC + 52460230 52460239 3.0E-06 TGAGGAAGTT 10 V_BBX_03_M02739 TRANSFAC + 52455941 52455955 7.0E-06 TAATAAAATGAATGA 15 V_BBX_03_M02739 TRANSFAC - 52455941 52455955 9.0E-06 TCATTCATTTTATTA 15 V_MYF6_03_M02781 TRANSFAC - 52455917 52455932 8.0E-06 ACATAACAGGTGCTCT 16 V_SRF_06_M02916 TRANSFAC - 52460246 52460262 8.0E-06 TAAGAAAAAAAATAGAA 17 V_SRF_06_M02916 TRANSFAC - 52460247 52460263 7.0E-06 TTAAGAAAAAAAATAGA 17 V_SRF_06_M02916 TRANSFAC - 52460248 52460264 0.0E+00 CTTAAGAAAAAAAATAG 17 V_SRF_06_M02916 TRANSFAC - 52460249 52460265 3.0E-06 TCTTAAGAAAAAAAATA 17 V_POU6F1_03_M01479 TRANSFAC - 52456762 52456778 5.0E-06 GCCCATAATTAGCAGGT 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 52456048 52456065 2.0E-06 GCAAGAAAGAAAGGAAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 52456052 52456069 8.0E-06 GAAAGAAAGGAAAGTGGC 18 V_SIX6_01_M01345 TRANSFAC - 52460261 52460277 1.0E-05 TTAAGTGTATCATCTTA 17 V_VDR_Q3_M00444 TRANSFAC - 52455175 52455189 8.0E-06 GGGGCTGGAGGGTGA 15 V_HLF_01_M00260 TRANSFAC + 52460295 52460304 5.0E-06 GTTATATAAT 10 V_SOX1_03_M02802 TRANSFAC - 52455943 52455958 9.0E-06 CATTCATTCATTTTAT 16 V_IRF1_01_M00062 TRANSFAC + 52456007 52456019 5.0E-06 GAATACCAAAAGC 13 V_HOXA10_01_M01464 TRANSFAC + 52455937 52455952 0.0E+00 GGAGTAATAAAATGAA 16 V_LPOLYA_B_M00318 TRANSFAC + 52456111 52456118 7.0E-06 CAATAAAG 8 V_HOXD10_01_M01375 TRANSFAC + 52455937 52455953 1.0E-06 GGAGTAATAAAATGAAT 17 V_HOXD10_01_M01375 TRANSFAC + 52456107 52456123 2.0E-06 CTGACAATAAAGTTTAT 17 V_BRCA_01_M01082 TRANSFAC + 52460286 52460293 1.0E-05 TTCTGTTG 8 V_MIF1_01_M00279 TRANSFAC + 52456802 52456819 7.0E-06 AAGGTGCTGAGTAACTTG 18 V_PAX4_04_M00380 TRANSFAC - 52460226 52460255 6.0E-06 AAAAATAGAATACGACAACTTCCTCATTTT 30 V_PAX4_04_M00380 TRANSFAC - 52460232 52460261 4.0E-06 AAGAAAAAAAATAGAATACGACAACTTCCT 30 V_HOXA4_Q2_M00640 TRANSFAC - 52456767 52456774 5.0E-06 ATAATTAG 8 V_SPIB_03_M02076 TRANSFAC + 52460230 52460239 2.0E-06 TGAGGAAGTT 10 V_NANOG_02_M01247 TRANSFAC - 52460243 52460262 7.0E-06 TAAGAAAAAAAATAGAATAC 20 V_NANOG_02_M01247 TRANSFAC - 52460249 52460268 8.0E-06 TCATCTTAAGAAAAAAAATA 20 V_HOXC9_01_M01416 TRANSFAC + 52455936 52455951 9.0E-06 AGGAGTAATAAAATGA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.