Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ATP5G1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 516 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) chr17 + 46965147 - 46970647 46970147 Transcription Factor Binding Sites   Download all TFBS in the ATP5G1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR + 46969615 46969624 3.0E-06 GGGACTTTCC 10 SOX10_HMG_full_dimeric_16_1 SELEX + 46970293 46970308 6.0E-06 AGCAATAGGCAGGGTT 16 MYF6_bHLH_full_dimeric_10_1 SELEX + 46969530 46969539 9.0E-06 AACAAATGTT 10 SPIC_ETS_full_monomeric_14_1 SELEX - 46968673 46968686 1.0E-06 TAAAACAGGAAATA 14 NHLH1_MA0048.1 JASPAR + 46970055 46970066 5.0E-06 AAGCAGCTGCGG 12 NHLH1_MA0048.1 JASPAR - 46970055 46970066 2.0E-06 CCGCAGCTGCTT 12 SOX9_HMG_full_dimeric_16_1 SELEX + 46970293 46970308 2.0E-06 AGCAATAGGCAGGGTT 16 SOX8_HMG_DBD_dimeric_16_1 SELEX + 46970293 46970308 6.0E-06 AGCAATAGGCAGGGTT 16 NFYA_MA0060.1 JASPAR + 46969963 46969978 8.0E-06 ATCGGCCAATCGTAAT 16 NFYA_MA0060.1 JASPAR + 46970096 46970111 5.0E-06 GTCAACCAATGGGGAC 16 NFYA_MA0060.1 JASPAR + 46970122 46970137 6.0E-06 TACGGCCAATGAGAAT 16 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 46970090 46970101 5.0E-06 GATGACGTCAAC 12 SPIB_ETS_DBD_monomeric_14_1 SELEX - 46968673 46968686 7.0E-06 TAAAACAGGAAATA 14 ETV2_ETS_DBD_monomeric_11_1 SELEX - 46968673 46968683 2.0E-06 AACAGGAAATA 11 REL_MA0101.1 JASPAR - 46969991 46970000 6.0E-06 GGGGCTTTCC 10 NFATC1_NFAT_full_dimeric_14_1 SELEX + 46969637 46969650 9.0E-06 CTCTCCATGGAAAG 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 46969637 46969650 4.0E-06 CTTTCCATGGAGAG 14 RELA_MA0107.1 JASPAR + 46969615 46969624 6.0E-06 GGGACTTTCC 10 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 46970089 46970102 9.0E-06 CGATGACGTCAACC 14 znf143_MA0088.1 JASPAR + 46969617 46969636 4.0E-06 GACTTTCCAGCCGGCCTTTA 20 SP4_C2H2_full_monomeric_17_1 SELEX + 46969993 46970009 9.0E-06 AAAGCCCCGCCTCTATC 17 CREB3_bZIP_full_dimeric_14_1 SELEX + 46970089 46970102 5.0E-06 CGATGACGTCAACC 14 CREB3_bZIP_full_dimeric_14_1 SELEX - 46970089 46970102 8.0E-06 GGTTGACGTCATCG 14 NFATC1_NFAT_full_dimeric_20_1 SELEX + 46969642 46969661 1.0E-06 CATGGAAAGCGGTCTTTCCA 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 46969644 46969663 1.0E-06 TGTGGAAAGACCGCTTTCCA 20 FEV_MA0156.1 JASPAR - 46968674 46968681 1.0E-05 CAGGAAAT 8 Pou5f1_MA0142.1 JASPAR - 46968932 46968946 3.0E-06 TATTTTTATTCAAAG 15 ELF5_ETS_full_monomeric_11_1 SELEX - 46968673 46968683 9.0E-06 AACAGGAAATA 11 SOX21_HMG_DBD_dimeric_16_1 SELEX + 46970293 46970308 2.0E-06 AGCAATAGGCAGGGTT 16 POU3F3_POU_DBD_dimeric_12_1 SELEX + 46968934 46968945 6.0E-06 TTGAATAAAAAT 12 Sox2_MA0143.1 JASPAR - 46968933 46968947 3.0E-06 TTATTTTTATTCAAA 15 NHLH1_bHLH_full_dimeric_10_1 SELEX + 46970056 46970065 5.0E-06 AGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 46970056 46970065 4.0E-06 CGCAGCTGCT 10 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 46970089 46970102 2.0E-06 CGATGACGTCAACC 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 46970089 46970102 3.0E-06 GGTTGACGTCATCG 14 V_MEQ_01_M02049 TRANSFAC + 46968659 46968667 4.0E-06 AAAACACAT 9 V_NFKAPPAB65_01_M00052 TRANSFAC + 46969615 46969624 7.0E-06 GGGACTTTCC 10 V_NFKB_C_M00208 TRANSFAC + 46969614 46969625 0.0E+00 GGGGACTTTCCA 12 V_NFKB_Q6_01_M00774 TRANSFAC - 46969614 46969629 5.0E-06 CGGCTGGAAAGTCCCC 16 V_BCL6_Q3_01_M02085 TRANSFAC - 46969538 46969547 5.0E-06 CTTTCTAAAA 10 V_MEQCJUN_02_M02048 TRANSFAC + 46970090 46970100 4.0E-06 GATGACGTCAA 11 V_MEQCJUN_02_M02048 TRANSFAC - 46970091 46970101 1.0E-06 GTTGACGTCAT 11 V_ATF_01_M00017 TRANSFAC + 46970089 46970102 3.0E-06 CGATGACGTCAACC 14 V_SMAD3_Q6_01_M01888 TRANSFAC - 46969828 46969840 5.0E-06 AGTCAGACACATG 13 V_MAX_Q6_M01830 TRANSFAC + 46970148 46970159 8.0E-06 CAGGACACGTGG 12 V_MTF1_Q4_M00650 TRANSFAC + 46969516 46969529 2.0E-06 ACTGCACCCGGCCC 14 V_EVI1_04_M00081 TRANSFAC - 46968675 46968689 2.0E-06 AAATAAAACAGGAAA 15 V_ESE1_01_M01977 TRANSFAC - 46968673 46968682 8.0E-06 ACAGGAAATA 10 V_POU5F1_02_M02245 TRANSFAC - 46968932 46968946 3.0E-06 TATTTTTATTCAAAG 15 V_HOXA13_02_M01297 TRANSFAC - 46968669 46968677 4.0E-06 AAATAAAAT 9 V_HOXA13_02_M01297 TRANSFAC - 46968681 46968689 1.0E-06 AAATAAAAC 9 V_ZFP740_04_M02938 TRANSFAC + 46970332 46970348 4.0E-06 TATTTCCCCCCAGTGCT 17 V_EBOX_Q6_01_M01034 TRANSFAC - 46970150 46970159 8.0E-06 CCACGTGTCC 10 V_RORA_Q4_M01138 TRANSFAC + 46968899 46968909 4.0E-06 TTACTGGGTCA 11 V_CREB_Q4_01_M00917 TRANSFAC + 46970089 46970099 0.0E+00 CGATGACGTCA 11 V_MEF2_02_M00231 TRANSFAC + 46968931 46968952 5.0E-06 CCTTTGAATAAAAATAAATATT 22 V_ATF3_Q6_01_M01863 TRANSFAC + 46970091 46970101 6.0E-06 ATGACGTCAAC 11 V_YY1_Q6_M00793 TRANSFAC + 46969897 46969905 7.0E-06 GCCATCTTG 9 V_JUNDM2_03_M02772 TRANSFAC + 46970088 46970103 9.0E-06 TCGATGACGTCAACCA 16 V_JUNDM2_03_M02772 TRANSFAC - 46970088 46970103 1.0E-06 TGGTTGACGTCATCGA 16 V_PU1_Q4_M01172 TRANSFAC + 46968667 46968685 0.0E+00 TGATTTTATTTCCTGTTTT 19 V_SOX21_03_M02803 TRANSFAC + 46968934 46968949 6.0E-06 TTGAATAAAAATAAAT 16 V_TCFAP2E_04_M02926 TRANSFAC - 46968670 46968683 5.0E-06 AACAGGAAATAAAA 14 V_CDX_Q5_M00991 TRANSFAC - 46968671 46968688 1.0E-06 AATAAAACAGGAAATAAA 18 V_CETS1P54_02_M00074 TRANSFAC - 46968672 46968684 0.0E+00 AAACAGGAAATAA 13 V_ELF4_04_M02850 TRANSFAC + 46968651 46968667 0.0E+00 TCTCAAAAAAAACACAT 17 V_ELF4_04_M02850 TRANSFAC + 46968933 46968949 7.0E-06 TTTGAATAAAAATAAAT 17 V_TST1_01_M00133 TRANSFAC + 46968933 46968947 4.0E-06 TTTGAATAAAAATAA 15 V_SOX13_03_M02797 TRANSFAC + 46968935 46968950 9.0E-06 TGAATAAAAATAAATA 16 V_GC_01_M00255 TRANSFAC - 46969994 46970007 0.0E+00 TAGAGGCGGGGCTT 14 V_ZFP105_03_M02827 TRANSFAC + 46968933 46968947 6.0E-06 TTTGAATAAAAATAA 15 V_STAF_01_M00262 TRANSFAC + 46969766 46969787 1.0E-06 CAATCCCAACATGCAACGCGCC 22 V_PAX9_B_M00329 TRANSFAC + 46970185 46970208 3.0E-06 AAGGGCTAAAGCTGGGAGGTGAGT 24 V_CREL_01_M00053 TRANSFAC - 46969991 46970000 6.0E-06 GGGGCTTTCC 10 V_E12_Q6_M00693 TRANSFAC - 46970475 46970485 2.0E-06 GGCAGGTGTCG 11 V_NFKB_Q6_M00194 TRANSFAC + 46969613 46969626 1.0E-06 TGGGGACTTTCCAG 14 V_HNF1_Q6_01_M01011 TRANSFAC + 46968933 46968953 4.0E-06 TTTGAATAAAAATAAATATTG 21 V_ASCL2_03_M02737 TRANSFAC - 46970052 46970068 3.0E-06 TTCCGCAGCTGCTTCCT 17 V_USF_02_M00122 TRANSFAC + 46968659 46968672 1.0E-06 AAAACACATGATTT 14 V_USF_02_M00122 TRANSFAC - 46968659 46968672 1.0E-06 AAATCATGTGTTTT 14 V_ELF5_01_M01197 TRANSFAC - 46968673 46968683 3.0E-06 AACAGGAAATA 11 V_OCT1_04_M00138 TRANSFAC + 46968682 46968704 5.0E-06 TTTTATTTCTGCTTATTTCATCA 23 V_OCT1_04_M00138 TRANSFAC - 46968925 46968947 5.0E-06 TTATTTTTATTCAAAGGCTGTGA 23 V_OCT1_04_M00138 TRANSFAC - 46968931 46968953 3.0E-06 CAATATTTATTTTTATTCAAAGG 23 V_REX1_03_M01744 TRANSFAC - 46969893 46969904 7.0E-06 AAGATGGCGACC 12 V_HBP1_03_M02762 TRANSFAC + 46970378 46970393 0.0E+00 CTTATCAATGAATGTT 16 V_MEF2_04_M00233 TRANSFAC + 46968931 46968952 1.0E-06 CCTTTGAATAAAAATAAATATT 22 V_RFX_Q6_M00975 TRANSFAC - 46968630 46968638 4.0E-06 CTGTTGCCA 9 V_ATF3_Q6_M00513 TRANSFAC + 46970089 46970102 3.0E-06 CGATGACGTCAACC 14 V_CETS1P54_01_M00032 TRANSFAC - 46968673 46968682 1.0E-05 ACAGGAAATA 10 V_ARID3A_04_M02735 TRANSFAC + 46968930 46968946 8.0E-06 GCCTTTGAATAAAAATA 17 V_CREB_Q2_01_M00916 TRANSFAC - 46970088 46970101 5.0E-06 GTTGACGTCATCGA 14 V_SOX17_04_M02904 TRANSFAC - 46970380 46970396 8.0E-06 ATTAACATTCATTGATA 17 V_ELF1_Q6_M00746 TRANSFAC - 46968674 46968685 1.0E-06 AAAACAGGAAAT 12 V_CREM_Q6_M01820 TRANSFAC - 46970089 46970099 6.0E-06 TGACGTCATCG 11 V_YY1_03_M02044 TRANSFAC + 46969894 46969905 4.0E-06 GTCGCCATCTTG 12 V_VJUN_01_M00036 TRANSFAC + 46970088 46970103 3.0E-06 TCGATGACGTCAACCA 16 V_SOX15_03_M02799 TRANSFAC + 46968935 46968951 8.0E-06 TGAATAAAAATAAATAT 17 V_MAZR_01_M00491 TRANSFAC - 46969741 46969753 1.0E-06 AGGGGGGGGGCCC 13 V_MYF6_04_M02885 TRANSFAC - 46970202 46970216 5.0E-06 GGTGACAGACTCACC 15 V_FAC1_01_M00456 TRANSFAC + 46968655 46968668 2.0E-06 AAAAAAAACACATG 14 V_HEN1_02_M00058 TRANSFAC - 46970050 46970071 4.0E-06 GCTTTCCGCAGCTGCTTCCTCT 22 V_FOXL1_04_M02753 TRANSFAC + 46968935 46968951 7.0E-06 TGAATAAAAATAAATAT 17 V_ATF1_03_M02738 TRANSFAC + 46970088 46970103 4.0E-06 TCGATGACGTCAACCA 16 V_ATF1_03_M02738 TRANSFAC - 46970088 46970103 2.0E-06 TGGTTGACGTCATCGA 16 V_ATF2_Q5_M01862 TRANSFAC + 46970089 46970100 3.0E-06 CGATGACGTCAA 12 V_NFY_01_M00287 TRANSFAC + 46969963 46969978 9.0E-06 ATCGGCCAATCGTAAT 16 V_NFY_01_M00287 TRANSFAC + 46970096 46970111 5.0E-06 GTCAACCAATGGGGAC 16 V_NFY_01_M00287 TRANSFAC + 46970122 46970137 1.0E-05 TACGGCCAATGAGAAT 16 V_TCF4_Q5_M00671 TRANSFAC + 46968931 46968938 1.0E-05 CCTTTGAA 8 V_NFAT2_02_M01749 TRANSFAC - 46969638 46969648 5.0E-06 TTCCATGGAGA 11 V_NFAT2_02_M01749 TRANSFAC + 46969639 46969649 1.0E-06 CTCCATGGAAA 11 V_R_01_M00273 TRANSFAC - 46969777 46969797 7.0E-06 TGGGCCACGGGGCGCGTTGCA 21 V_TITF1_Q3_M00432 TRANSFAC + 46968890 46968899 8.0E-06 ACTCAAGAAT 10 V_NFKAPPAB_01_M00054 TRANSFAC + 46969615 46969624 3.0E-06 GGGACTTTCC 10 V_SOX2_01_M02246 TRANSFAC - 46968933 46968947 3.0E-06 TTATTTTTATTCAAA 15 V_SRF_06_M02916 TRANSFAC + 46968651 46968667 2.0E-06 TCTCAAAAAAAACACAT 17 V_NMYC_01_M00055 TRANSFAC - 46970150 46970161 9.0E-06 ACCCACGTGTCC 12 V_SMAD3_Q6_M00701 TRANSFAC + 46969832 46969840 6.0E-06 TGTCTGACT 9 V_CREB_02_M00113 TRANSFAC - 46970092 46970103 3.0E-06 TGGTTGACGTCA 12 V_GATA5_03_M02756 TRANSFAC - 46970373 46970389 3.0E-06 TTCATTGATAAGGCCAT 17 V_NFYA_Q5_M02106 TRANSFAC + 46970124 46970137 1.0E-06 CGGCCAATGAGAAT 14 V_ATF_B_M00338 TRANSFAC - 46970089 46970100 1.0E-06 TTGACGTCATCG 12 V_ATF_B_M00338 TRANSFAC + 46970091 46970102 1.0E-06 ATGACGTCAACC 12 V_FEV_01_M02269 TRANSFAC - 46968674 46968681 1.0E-05 CAGGAAAT 8 V_NANOG_02_M01247 TRANSFAC + 46968933 46968952 8.0E-06 TTTGAATAAAAATAAATATT 20 V_OCT4_01_M01125 TRANSFAC - 46968932 46968946 2.0E-06 TATTTTTATTCAAAG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.