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SRRT Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51593 serrate RNA effector molecule homolog (Arabidopsis) chr7 + 100467700 - 100473200 100472700 Transcription Factor Binding Sites   Download all TFBS in the SRRT promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX - 100472421 100472440 9.0E-06 CTGACCTCACCGGGGGTGAT 20 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 100475361 100475376 4.0E-06 TGAGGTCAGGAGTTCA 16 SOX9_HMG_full_dimeric_17_3 SELEX + 100475508 100475524 9.0E-06 AATGAATGACAAACAGT 17 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 100475358 100475375 2.0E-06 GAGGTCAGGAGTTCAAGA 18 LEF1_HMG_DBD_monomeric_15_1 SELEX + 100473296 100473310 8.0E-06 AGAGATGAAAGACGT 15 NFATC1_NFAT_full_dimeric_14_1 SELEX + 100475481 100475494 1.0E-06 TTTTCCATGGGATG 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 100475481 100475494 1.0E-06 CATCCCATGGAAAA 14 SP1_MA0079.2 JASPAR - 100472952 100472961 3.0E-06 CCCCTCCCCC 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 100473296 100473307 1.0E-05 AGAGATGAAAGA 12 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 100475360 100475375 1.0E-06 GAGGTCAGGAGTTCAA 16 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 100475361 100475375 0.0E+00 GAGGTCAGGAGTTCA 15 ETV6_ETS_full_dimeric_15_1 SELEX - 100472700 100472714 2.0E-06 CCGGAACTGGAACTA 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 100475360 100475375 2.0E-06 GAGGTCAGGAGTTCAA 16 MSC_bHLH_full_dimeric_10_1 SELEX + 100475473 100475482 6.0E-06 AACAGCTTTT 10 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 100475361 100475375 5.0E-06 GAGGTCAGGAGTTCA 15 V_FOXP1_01_M00987 TRANSFAC + 100475495 100475514 6.0E-06 TTATTTTTACTTGAATGAAT 20 V_DBX1_01_M01483 TRANSFAC - 100475495 100475511 5.0E-06 CATTCAAGTAAAAATAA 17 V_PREP1_01_M01459 TRANSFAC - 100473324 100473339 7.0E-06 GCTCACCTGTCATTCC 16 V_HNF1_02_M01379 TRANSFAC - 100472216 100472232 9.0E-06 CCGTCTTTAAGTAAAAT 17 V_IK_Q5_M01169 TRANSFAC - 100468910 100468919 3.0E-06 TTTGGGAGGC 10 V_IK_Q5_M01169 TRANSFAC - 100472010 100472019 3.0E-06 TTTGGGAGGC 10 V_MEF2_02_M00231 TRANSFAC - 100475490 100475511 9.0E-06 CATTCAAGTAAAAATAACATCC 22 V_RP58_01_M00532 TRANSFAC + 100472489 100472500 5.0E-06 GACACATCTGGG 12 V_AP4_Q6_M00176 TRANSFAC + 100472046 100472055 2.0E-06 CTCAGCTGGT 10 V_FOXO3A_Q1_M01137 TRANSFAC - 100475492 100475503 5.0E-06 TAAAAATAACAT 12 V_AP2_Q6_01_M00915 TRANSFAC - 100472965 100472977 6.0E-06 GGCCCCCCAGGCT 13 V_SP1_03_M02281 TRANSFAC - 100472952 100472961 3.0E-06 CCCCTCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC - 100475408 100475417 1.0E-06 TGTAATCCCA 10 V_AFP1_Q6_M00616 TRANSFAC - 100475492 100475502 9.0E-06 AAAAATAACAT 11 V_LYF1_01_M00141 TRANSFAC - 100468911 100468919 9.0E-06 TTTGGGAGG 9 V_LYF1_01_M00141 TRANSFAC - 100472011 100472019 9.0E-06 TTTGGGAGG 9 V_NFAT2_01_M01748 TRANSFAC - 100475480 100475488 3.0E-06 ATGGAAAAA 9 V_TCFAP2E_04_M02926 TRANSFAC - 100475496 100475509 8.0E-06 TTCAAGTAAAAATA 14 V_PAX_Q6_M00808 TRANSFAC - 100472698 100472708 0.0E+00 CTGGAACTAAC 11 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 100475362 100475376 2.0E-06 TGAGGTCAGGAGTTC 15 V_KLF7_04_M02877 TRANSFAC - 100472149 100472165 2.0E-06 AAGTTAACGCCCTAAAC 17 V_RPC155_01_M01798 TRANSFAC - 100475356 100475371 0.0E+00 TCAGGAGTTCAAGACC 16 V_FOXA2_02_M02853 TRANSFAC - 100472692 100472706 3.0E-06 GGAACTAACAAACCG 15 V_TGIF_02_M01346 TRANSFAC + 100473323 100473339 6.0E-06 TGGAATGACAGGTGAGC 17 V_GFI1_01_M00250 TRANSFAC - 100475513 100475536 6.0E-06 GTATGAACAATCACTGTTTGTCAT 24 V_PAX9_B_M00329 TRANSFAC - 100475522 100475545 8.0E-06 AATACCCAAGTATGAACAATCACT 24 V_ZBP89_Q4_M01816 TRANSFAC - 100472951 100472960 4.0E-06 CCCTCCCCCA 10 V_RSRFC4_Q2_M00407 TRANSFAC - 100475491 100475507 3.0E-06 CAAGTAAAAATAACATC 17 V_FOXK1_04_M02856 TRANSFAC - 100475490 100475504 1.0E-05 GTAAAAATAACATCC 15 V_MAZ_Q6_01_M02023 TRANSFAC + 100472952 100472965 0.0E+00 GGGGGAGGGGAGGA 14 V_HBP1_03_M02762 TRANSFAC - 100472117 100472132 2.0E-06 AGATTCAATGGATTAC 16 V_HBP1_03_M02762 TRANSFAC + 100475502 100475517 0.0E+00 TACTTGAATGAATGAC 16 V_AP4_Q5_M00175 TRANSFAC + 100472046 100472055 1.0E-06 CTCAGCTGGT 10 V_MEF2_Q6_01_M00941 TRANSFAC + 100475493 100475504 3.0E-06 TGTTATTTTTAC 12 V_NKX3A_01_M00451 TRANSFAC - 100472217 100472228 7.0E-06 CTTTAAGTAAAA 12 V_TGIF1_01_M03111 TRANSFAC + 100473323 100473339 6.0E-06 TGGAATGACAGGTGAGC 17 V_BCL6B_04_M02844 TRANSFAC + 100472644 100472659 8.0E-06 ATCCCCGCCCCTTTCC 16 V_TTF1_Q5_M02034 TRANSFAC - 100472830 100472843 7.0E-06 GAGCTCTTGAGTAG 14 V_MYOD_Q6_01_M00929 TRANSFAC - 100475377 100475394 6.0E-06 TCGAAGCAGGTGGATATG 18 V_BDP1_01_M01796 TRANSFAC + 100475356 100475367 2.0E-06 GGTCTTGAACTC 12 V_PITX2_Q2_M00482 TRANSFAC - 100475407 100475417 1.0E-06 TGTAATCCCAG 11 V_RSRFC4_01_M00026 TRANSFAC + 100475492 100475507 5.0E-06 ATGTTATTTTTACTTG 16 V_NFAT2_02_M01749 TRANSFAC - 100475482 100475492 2.0E-06 TCCCATGGAAA 11 V_NFAT2_02_M01749 TRANSFAC + 100475483 100475493 6.0E-06 TTCCATGGGAT 11 V_SMAD_Q6_01_M00974 TRANSFAC + 100475545 100475555 9.0E-06 TTGGCAGACAT 11 V_ZFP281_01_M01597 TRANSFAC + 100472951 100472961 1.0E-06 TGGGGGAGGGG 11 V_BBX_03_M02739 TRANSFAC - 100475502 100475516 2.0E-06 TCATTCATTCAAGTA 15 V_ZFP281_04_M02831 TRANSFAC - 100472949 100472963 2.0E-06 CTCCCCTCCCCCACC 15 V_ZIC3_04_M02837 TRANSFAC + 100472423 100472437 5.0E-06 CACCCCCGGTGAGGT 15 V_SP1_Q2_01_M00933 TRANSFAC + 100472646 100472655 7.0E-06 CCCCGCCCCT 10 V_ARP1_01_M00155 TRANSFAC + 100475361 100475376 1.0E-06 TGAACTCCTGACCTCA 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 100472949 100472962 0.0E+00 GGTGGGGGAGGGGA 14 V_SP1_Q4_01_M00932 TRANSFAC - 100472644 100472656 6.0E-06 AAGGGGCGGGGAT 13 V_NF1_Q6_M00193 TRANSFAC + 100475543 100475560 7.0E-06 ATTTGGCAGACATCTTGA 18 V_T3RALPHA_Q6_M01724 TRANSFAC + 100472430 100472440 8.0E-06 GGTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.