Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ARMCX3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51566 armadillo repeat containing, X-linked 3 chrX + 100873119 - 100878619 100878119 Transcription Factor Binding Sites   Download all TFBS in the ARMCX3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 100874470 100874487 2.0E-06 ACTCTAAATATAGACACT 18 POU2F1_POU_DBD_dimeric_14_1 SELEX - 100874608 100874621 7.0E-06 TCTGAATATTCACC 14 HSF1_HSF_full_trimeric_13_1 SELEX - 100878278 100878290 8.0E-06 TTATGGAATCTTC 13 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 100874472 100874483 1.0E-06 TCTAAATATAGA 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 100874472 100874483 7.0E-06 TCTATATTTAGA 12 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 100874619 100874627 7.0E-06 AGAAGTCAA 9 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 100878114 100878123 9.0E-06 CTCACGTGAC 10 EWSR1-FLI1_MA0149.1 JASPAR + 100878231 100878248 7.0E-06 GGAAGAGGAGAAGGAAAT 18 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 100878193 100878205 1.0E-06 TGCCCTGAGGGCG 13 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 100878193 100878205 6.0E-06 CGCCCTCAGGGCA 13 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 100874472 100874483 1.0E-06 TCTAAATATAGA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 100874472 100874483 6.0E-06 TCTATATTTAGA 12 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 100878193 100878205 1.0E-06 TGCCCTGAGGGCG 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 100878193 100878205 2.0E-06 CGCCCTCAGGGCA 13 MEF2B_MADS_full_dimeric_12_1 SELEX + 100874472 100874483 2.0E-06 TCTAAATATAGA 12 MEF2A_MA0052.1 JASPAR - 100874473 100874482 2.0E-06 CTATATTTAG 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 100878114 100878123 7.0E-06 GTCACGTGAG 10 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 100874621 100874634 0.0E+00 AAGTCAATATGTCA 14 XBP1_bZIP_DBD_dimeric_14_1 SELEX - 100878102 100878115 3.0E-06 AGGGCTACGTCATC 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 100874608 100874621 3.0E-06 GGTGAATATTCAGA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 100874608 100874621 4.0E-06 TCTGAATATTCACC 14 SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 100878114 100878123 8.0E-06 CTCACGTGAC 10 SP1_MA0079.2 JASPAR - 100877833 100877842 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 100879239 100879248 3.0E-06 CCCCTCCCCC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 100878114 100878123 5.0E-06 CTCACGTGAC 10 SP4_C2H2_full_monomeric_17_1 SELEX - 100879236 100879252 8.0E-06 CTAACCCCTCCCCCATT 17 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 100878114 100878123 8.0E-06 CTCACGTGAC 10 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 100878193 100878205 3.0E-06 TGCCCTGAGGGCG 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 100878193 100878205 8.0E-06 CGCCCTCAGGGCA 13 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 100874472 100874485 9.0E-06 TCTAAATATAGACA 14 MTF1_C2H2_DBD_monomeric_14_1 SELEX - 100878130 100878143 3.0E-06 TCTGCACACGTCAG 14 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 100878193 100878205 3.0E-06 CGCCCTCAGGGCA 13 TFE3_bHLH_DBD_dimeric_10_1 SELEX + 100878114 100878123 6.0E-06 CTCACGTGAC 10 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 100878126 100878143 5.0E-06 AGAGCTGACGTGTGCAGA 18 ELF5_MA0136.1 JASPAR - 100878241 100878249 5.0E-06 AATTTCCTT 9 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 100878114 100878123 6.0E-06 GTCACGTGAG 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX + 100878114 100878123 2.0E-06 CTCACGTGAC 10 V_CDX2_Q5_01_M01659 TRANSFAC + 100877896 100877906 8.0E-06 TTCATAAAAGT 11 V_MYOD_Q6_M00184 TRANSFAC + 100874444 100874453 7.0E-06 TCCACCTGTC 10 V_POU3F3_01_M03090 TRANSFAC + 100874416 100874432 9.0E-06 CAAGTATGCAGAAGTTA 17 V_ATF5_01_M01295 TRANSFAC - 100877879 100877889 4.0E-06 CCTCTTCCTTC 11 V_ALX4_01_M00619 TRANSFAC + 100874388 100874400 0.0E+00 CCTCAGAATAATC 13 V_SIX6_02_M01398 TRANSFAC - 100874511 100874527 7.0E-06 TCTGGGGTGTCATATTT 17 V_MTF1_Q4_M00650 TRANSFAC - 100878130 100878143 6.0E-06 TCTGCACACGTCAG 14 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 100874606 100874617 0.0E+00 AATATTCACCAG 12 V_ATF4_Q6_M01864 TRANSFAC - 100878102 100878110 6.0E-06 TACGTCATC 9 V_COE1_Q6_M01871 TRANSFAC + 100877922 100877935 9.0E-06 CCCCAGGGGAAGAT 14 V_MAFB_05_M02775 TRANSFAC - 100878596 100878612 6.0E-06 GGTTCTGCTGACATATC 17 V_MEF2_02_M00231 TRANSFAC + 100874466 100874487 1.0E-06 TCATACTCTAAATATAGACACT 22 V_OCTAMER_01_M01324 TRANSFAC + 100874416 100874432 9.0E-06 CAAGTATGCAGAAGTTA 17 V_MAF_Q6_M00648 TRANSFAC + 100879180 100879195 0.0E+00 AGGGAGGAAGTTTCCT 16 V_GABPA_04_M02858 TRANSFAC - 100878217 100878232 9.0E-06 CCTTTTTCCCTCCGCC 16 V_SP1_03_M02281 TRANSFAC - 100877833 100877842 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 100879239 100879248 3.0E-06 CCCCTCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC + 100874394 100874403 6.0E-06 AATAATCCCA 10 V_E2A_Q2_M00804 TRANSFAC + 100874445 100874458 2.0E-06 CCACCTGTCCCTGC 14 V_HELIOSA_01_M01003 TRANSFAC - 100874396 100874406 9.0E-06 TTTTGGGATTA 11 V_OCT2_02_M01761 TRANSFAC + 100874610 100874619 0.0E+00 TGAATATTCA 10 V_OCT2_02_M01761 TRANSFAC - 100874610 100874619 0.0E+00 TGAATATTCA 10 V_MEF2A_Q6_M02024 TRANSFAC - 100874472 100874481 1.0E-05 TATATTTAGA 10 V_HNF6_Q6_M00639 TRANSFAC + 100874619 100874630 2.0E-06 AGAAGTCAATAT 12 V_OCT1_02_M00136 TRANSFAC - 100874606 100874620 4.0E-06 CTGAATATTCACCAG 15 V_OCT1_02_M00136 TRANSFAC + 100874609 100874623 2.0E-06 GTGAATATTCAGAAG 15 V_TCFAP2C_03_M02821 TRANSFAC + 100877918 100877932 1.0E-06 ATAGCCCCAGGGGAA 15 V_TCFAP2C_03_M02821 TRANSFAC - 100877918 100877932 7.0E-06 TTCCCCTGGGGCTAT 15 V_NKX26_01_M01322 TRANSFAC - 100877903 100877918 5.0E-06 TGGGCCACTTGTACTT 16 V_SP4_03_M02810 TRANSFAC - 100878035 100878051 5.0E-06 GGGCCCGCCCCCCTCCT 17 V_ZBP89_Q4_M01816 TRANSFAC - 100878023 100878032 4.0E-06 CCCTCCCCCA 10 V_ZBP89_Q4_M01816 TRANSFAC - 100879238 100879247 4.0E-06 CCCTCCCCCA 10 V_RSRFC4_Q2_M00407 TRANSFAC + 100874470 100874486 0.0E+00 ACTCTAAATATAGACAC 17 V_RXRA_04_M02895 TRANSFAC + 100879075 100879090 5.0E-06 TCGGATAGTTTGTTCG 16 V_MAZ_Q6_01_M02023 TRANSFAC + 100877833 100877846 1.0E-06 GGGGGAGGGGAGGT 14 V_MEF2_03_M00232 TRANSFAC + 100874466 100874487 1.0E-06 TCATACTCTAAATATAGACACT 22 V_E4F1_Q6_01_M02091 TRANSFAC + 100878103 100878112 5.0E-06 ATGACGTAGC 10 V_MEF2_04_M00233 TRANSFAC + 100874466 100874487 9.0E-06 TCATACTCTAAATATAGACACT 22 V_CRX_02_M01436 TRANSFAC - 100874392 100874407 8.0E-06 GTTTTGGGATTATTCT 16 V_MEF2_Q6_01_M00941 TRANSFAC - 100874473 100874484 3.0E-06 GTCTATATTTAG 12 V_PPARA_02_M00518 TRANSFAC + 100878618 100878636 4.0E-06 AGAGGTAATAGGGGTGGGA 19 V_SIX2_01_M01433 TRANSFAC - 100874511 100874527 8.0E-06 TCTGGGGTGTCATATTT 17 V_MZF1_02_M00084 TRANSFAC + 100878070 100878082 4.0E-06 GTGGGAGGGGAAA 13 V_BLIMP1_Q6_M01066 TRANSFAC + 100878024 100878039 2.0E-06 GGGGGAGGGAAAGGAG 16 V_ISGF4G_04_M02875 TRANSFAC + 100877963 100877976 6.0E-06 GGGAAACACAACTA 14 V_IRX5_01_M01472 TRANSFAC + 100878959 100878975 8.0E-06 TAGGTACATGTCTGAGT 17 V_TFIII_Q6_M00706 TRANSFAC + 100874525 100874533 6.0E-06 AGAGGGAGG 9 V_BCL6B_04_M02844 TRANSFAC - 100878623 100878638 3.0E-06 TTTCCCACCCCTATTA 16 V_NKX25_03_M01414 TRANSFAC - 100877903 100877918 5.0E-06 TGGGCCACTTGTACTT 16 V_STRA13_01_M00985 TRANSFAC + 100878112 100878125 0.0E+00 CCCTCACGTGACCA 14 V_LUN1_01_M00480 TRANSFAC + 100877864 100877880 4.0E-06 TCCCAGGAGCCTAGGGA 17 V_ZBTB12_04_M02928 TRANSFAC + 100874495 100874509 9.0E-06 ACCTCTTAGAACATT 15 V_TCFAP2B_03_M02820 TRANSFAC + 100877919 100877932 4.0E-06 TAGCCCCAGGGGAA 14 V_PITX2_Q2_M00482 TRANSFAC + 100874394 100874404 1.0E-06 AATAATCCCAA 11 V_RSRFC4_01_M00026 TRANSFAC + 100874470 100874485 6.0E-06 ACTCTAAATATAGACA 16 V_RSRFC4_01_M00026 TRANSFAC - 100874470 100874485 1.0E-06 TGTCTATATTTAGAGT 16 V_SIX4_01_M01374 TRANSFAC + 100874511 100874527 1.0E-06 AAATATGACACCCCAGA 17 V_ZFP281_01_M01597 TRANSFAC + 100877832 100877842 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 100878023 100878033 9.0E-06 TGGGGGAGGGA 11 V_ZFP281_01_M01597 TRANSFAC + 100879238 100879248 1.0E-06 TGGGGGAGGGG 11 V_BBX_03_M02739 TRANSFAC - 100874501 100874515 6.0E-06 TATTTCAATGTTCTA 15 V_IRX2_01_M01405 TRANSFAC + 100878959 100878975 6.0E-06 TAGGTACATGTCTGAGT 17 V_TCFAP2A_03_M02819 TRANSFAC + 100877918 100877932 2.0E-06 ATAGCCCCAGGGGAA 15 V_TCFAP2A_03_M02819 TRANSFAC + 100878543 100878557 4.0E-06 AGTGCCGGAGGGGAA 15 V_ZFP281_04_M02831 TRANSFAC - 100878021 100878035 7.0E-06 TTTCCCTCCCCCACA 15 V_HSF2_02_M01244 TRANSFAC + 100878278 100878290 1.0E-05 GAAGATTCCATAA 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 100878231 100878248 7.0E-06 GGAAGAGGAGAAGGAAAT 18 V_E4F1_Q6_M00694 TRANSFAC - 100878103 100878112 8.0E-06 GCTACGTCAT 10 V_CREB_02_M00113 TRANSFAC + 100878100 100878111 8.0E-06 TGGATGACGTAG 12 V_PAX4_02_M00377 TRANSFAC - 100877888 100877898 6.0E-06 GAAAAATTGCC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 100877830 100877843 9.0E-06 CTCGGGGGAGGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 100878021 100878034 8.0E-06 TGTGGGGGAGGGAA 14 V_ELF5_04_M02241 TRANSFAC - 100878241 100878249 5.0E-06 AATTTCCTT 9 V_TCFAP2E_03_M02822 TRANSFAC + 100877918 100877932 7.0E-06 ATAGCCCCAGGGGAA 15 V_TCFAP2E_03_M02822 TRANSFAC - 100877918 100877932 1.0E-05 TTCCCCTGGGGCTAT 15 V_SP1_Q4_01_M00932 TRANSFAC + 100874525 100874537 9.0E-06 AGAGGGAGGGGCT 13 V_DMRT5_01_M01150 TRANSFAC - 100873109 100873123 2.0E-06 TATTGTTACAGAGGA 5 V_NKX21_01_M01312 TRANSFAC - 100877903 100877918 2.0E-06 TGGGCCACTTGTACTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.