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VTA1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51534 Vps20-associated 1 homolog (S. cerevisiae) chr6 + 142463409 - 142468909 142468409 Transcription Factor Binding Sites   Download all TFBS in the VTA1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 142467932 142467949 5.0E-06 CATGCAAGTATTGAAATT 18 CTCF_MA0139.1 JASPAR + 142468177 142468195 3.0E-06 CTACCAGCAGAGAGCGCTA 19 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 142468643 142468656 1.0E-06 GAGGTCAAAGCTCA 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 142468619 142468629 1.0E-05 GCCCCGCCCCC 11 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 142468097 142468113 9.0E-06 ATAGAAAAGGAAAAACA 17 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 142468618 142468631 7.0E-06 TGCCCCGCCCCCCT 14 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 142468643 142468656 1.0E-06 GAGGTCAAAGCTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 142468643 142468656 1.0E-06 GAGGTCAAAGCTCA 14 Pax4_MA0068.1 JASPAR + 142468141 142468170 7.0E-06 AAACAAAAAAGCAAAACAAAACAAAAACCC 30 Pax4_MA0068.1 JASPAR + 142468142 142468171 9.0E-06 AACAAAAAAGCAAAACAAAACAAAAACCCT 30 Pax4_MA0068.1 JASPAR + 142468145 142468174 6.0E-06 AAAAAAGCAAAACAAAACAAAAACCCTTCC 30 Pax4_MA0068.1 JASPAR + 142468147 142468176 5.0E-06 AAAAGCAAAACAAAACAAAAACCCTTCCTC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 142468370 142468383 9.0E-06 CGGAAGCGGAAGTG 14 RFX2_RFX_DBD_dimeric_15_1 SELEX - 142468305 142468319 5.0E-06 CGTTGCTCAGCGACG 15 SP1_MA0079.2 JASPAR + 142468620 142468629 7.0E-06 CCCCGCCCCC 10 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 142468716 142468727 8.0E-06 GTGGACACCATG 12 FOXI1_MA0042.1 JASPAR - 142468137 142468148 7.0E-06 TTTTGTTTGGTT 12 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 142468642 142468656 1.0E-06 GAGGTCAAAGCTCAG 15 RFX3_RFX_DBD_dimeric_15_1 SELEX + 142468305 142468319 6.0E-06 CGTCGCTGAGCAACG 15 RFX3_RFX_DBD_dimeric_15_1 SELEX - 142468305 142468319 6.0E-06 CGTTGCTCAGCGACG 15 SP4_C2H2_full_monomeric_17_1 SELEX + 142468616 142468632 2.0E-06 CATGCCCCGCCCCCCTC 17 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 142468643 142468656 8.0E-06 GAGGTCAAAGCTCA 14 RFX4_RFX_DBD_dimeric_15_1 SELEX + 142468305 142468319 1.0E-06 CGTCGCTGAGCAACG 15 RFX4_RFX_DBD_dimeric_15_1 SELEX - 142468305 142468319 1.0E-06 CGTTGCTCAGCGACG 15 INSM1_MA0155.1 JASPAR - 142468686 142468697 4.0E-06 TGCCAGGGGGTG 12 Evi1_MA0029.1 JASPAR - 142468734 142468747 9.0E-06 AGCACAAGATAGGA 14 HNF4A_MA0114.1 JASPAR - 142468643 142468655 7.0E-06 AGGTCAAAGCTCA 13 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 142468643 142468656 1.0E-06 GAGGTCAAAGCTCA 14 ETV6_ETS_full_monomeric_10_1 SELEX + 142468374 142468383 1.0E-06 AGCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX + 142468369 142468383 0.0E+00 ACGGAAGCGGAAGTG 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 142468155 142468167 6.0E-06 AACAAAACAAAAA 13 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 142468643 142468656 0.0E+00 GAGGTCAAAGCTCA 14 RREB1_MA0073.1 JASPAR + 142468132 142468151 2.0E-06 CAACAAACCAAACAAAAAAG 20 V_FOXP1_01_M00987 TRANSFAC - 142468127 142468146 0.0E+00 TTGTTTGGTTTGTTGTTTGT 20 V_FOXP1_01_M00987 TRANSFAC - 142468129 142468148 7.0E-06 TTTTGTTTGGTTTGTTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 142468141 142468160 2.0E-06 TTTGTTTTGCTTTTTTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 142468145 142468164 1.0E-06 TTGTTTTGTTTTGCTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 142468146 142468165 5.0E-06 TTTGTTTTGTTTTGCTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 142468149 142468168 2.0E-06 GTTTTTGTTTTGTTTTGCTT 20 V_TCF3_01_M01594 TRANSFAC - 142468150 142468162 2.0E-06 GTTTTGTTTTGCT 13 V_TCF3_01_M01594 TRANSFAC - 142468155 142468167 1.0E-06 TTTTTGTTTTGTT 13 V_EVI1_04_M00081 TRANSFAC - 142468101 142468115 2.0E-06 GGATAGAAAAGGAAA 15 V_BCL6_01_M01183 TRANSFAC + 142468092 142468107 2.0E-06 TTTCTTGTTTTTCCTT 16 V_BCL6_01_M01183 TRANSFAC - 142468148 142468163 3.0E-06 TGTTTTGTTTTGCTTT 16 V_PROP1_01_M01294 TRANSFAC - 142467940 142467950 7.0E-06 TAATTTCAATA 11 V_SP1_Q6_01_M00931 TRANSFAC - 142468619 142468628 4.0E-06 GGGGCGGGGC 10 V_NFMUE1_Q6_M00651 TRANSFAC - 142468423 142468431 6.0E-06 CGGCCATCT 9 V_SRY_02_M00160 TRANSFAC + 142468152 142468163 8.0E-06 CAAAACAAAACA 12 V_NFAT3_Q3_M01734 TRANSFAC + 142468097 142468106 6.0E-06 TGTTTTTCCT 10 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 142468642 142468654 2.0E-06 CTGAGCTTTGACC 13 V_CEBP_01_M00159 TRANSFAC - 142468133 142468145 7.0E-06 TGTTTGGTTTGTT 13 V_EAR2_Q2_M01728 TRANSFAC + 142468643 142468656 4.0E-06 TGAGCTTTGACCTC 14 V_HNF3_Q6_01_M01012 TRANSFAC + 142468084 142468101 5.0E-06 TACATTATTTTCTTGTTT 18 V_HNF3_Q6_01_M01012 TRANSFAC - 142468133 142468150 0.0E+00 TTTTTTGTTTGGTTTGTT 18 V_SP1_03_M02281 TRANSFAC + 142468620 142468629 7.0E-06 CCCCGCCCCC 10 V_HNF4A_03_M02220 TRANSFAC - 142468643 142468655 7.0E-06 AGGTCAAAGCTCA 13 V_PU1_Q4_M01172 TRANSFAC + 142468084 142468102 7.0E-06 TACATTATTTTCTTGTTTT 19 V_SPIC_01_M02042 TRANSFAC + 142468374 142468383 9.0E-06 AGCGGAAGTG 10 V_HELIOSA_02_M01004 TRANSFAC - 142468099 142468109 0.0E+00 AAAAGGAAAAA 11 V_FOXA2_02_M02853 TRANSFAC + 142468127 142468141 1.0E-05 ACAAACAACAAACCA 15 V_POU3F2_01_M00463 TRANSFAC + 142468083 142468096 5.0E-06 ATACATTATTTTCT 14 V_ZFP105_03_M02827 TRANSFAC + 142468126 142468140 1.0E-05 CACAAACAACAAACC 15 V_HNF4_01_B_M00411 TRANSFAC - 142468642 142468656 1.0E-06 GAGGTCAAAGCTCAG 15 V_NFAT_Q6_M00302 TRANSFAC - 142468098 142468109 4.0E-06 AAAAGGAAAAAC 12 V_SP4_03_M02810 TRANSFAC + 142468618 142468634 5.0E-06 TGCCCCGCCCCCCTCGC 17 V_SP1_Q6_M00196 TRANSFAC - 142468618 142468630 6.0E-06 GGGGGGCGGGGCA 13 V_IRF3_Q3_M01279 TRANSFAC + 142468096 142468108 1.0E-06 TTGTTTTTCCTTT 13 V_IRF3_Q3_M01279 TRANSFAC - 142468148 142468160 1.0E-06 TTTGTTTTGCTTT 13 V_GADP_01_M01258 TRANSFAC - 142468372 142468383 5.0E-06 CACTTCCGCTTC 12 V_OCT1_04_M00138 TRANSFAC + 142467933 142467955 4.0E-06 ATGCAAGTATTGAAATTAAAGTT 23 V_MEF2_04_M00233 TRANSFAC + 142467950 142467971 7.0E-06 AAAGTTTCTAAAATCAAAAAGG 22 V_RREB1_01_M00257 TRANSFAC + 142468125 142468138 6.0E-06 CCACAAACAACAAA 14 V_PNR_01_M01650 TRANSFAC - 142468643 142468656 5.0E-06 GAGGTCAAAGCTCA 14 V_HNF4_DR1_Q3_M00764 TRANSFAC + 142468643 142468655 1.0E-06 TGAGCTTTGACCT 13 V_POU6F1_01_M00465 TRANSFAC + 142468081 142468091 5.0E-06 ACATACATTAT 11 V_CTCF_01_M01200 TRANSFAC + 142468176 142468195 4.0E-06 CCTACCAGCAGAGAGCGCTA 20 V_INSM1_01_M02268 TRANSFAC - 142468686 142468697 4.0E-06 TGCCAGGGGGTG 12 V_ISGF4G_04_M02875 TRANSFAC + 142468151 142468164 3.0E-06 GCAAAACAAAACAA 14 V_FOXO1_Q5_M01216 TRANSFAC - 142468095 142468103 8.0E-06 AAAAACAAG 9 V_FOXO1_Q5_M01216 TRANSFAC + 142468152 142468160 8.0E-06 CAAAACAAA 9 V_FOXO1_Q5_M01216 TRANSFAC + 142468157 142468165 8.0E-06 CAAAACAAA 9 V_EVI1_06_M00011 TRANSFAC - 142468736 142468744 4.0E-06 ACAAGATAG 9 V_SP4_Q5_M01273 TRANSFAC + 142468619 142468629 1.0E-06 GCCCCGCCCCC 11 V_MTF1_06_M02882 TRANSFAC - 142468088 142468101 1.0E-05 AAACAAGAAAATAA 14 V_GABPBETA_Q3_M01876 TRANSFAC + 142468374 142468384 2.0E-06 AGCGGAAGTGC 11 V_FAC1_01_M00456 TRANSFAC + 142468154 142468167 0.0E+00 AAACAAAACAAAAA 14 V_TAL1_01_M01591 TRANSFAC + 142468101 142468113 6.0E-06 TTTCCTTTTCTAT 13 V_CNOT3_01_M01253 TRANSFAC + 142468553 142468562 8.0E-06 GGCCGCGCCC 10 V_DR1_Q3_M00762 TRANSFAC - 142468643 142468655 1.0E-06 AGGTCAAAGCTCA 13 V_FOXL1_02_M02857 TRANSFAC + 142468135 142468150 2.0E-06 CAAACCAAACAAAAAA 16 V_FOXL1_02_M02857 TRANSFAC + 142468148 142468163 0.0E+00 AAAGCAAAACAAAACA 16 V_FOXL1_02_M02857 TRANSFAC + 142468153 142468168 0.0E+00 AAAACAAAACAAAAAC 16 V_FOXJ3_06_M02855 TRANSFAC + 142468134 142468150 6.0E-06 ACAAACCAAACAAAAAA 17 V_FOXJ3_06_M02855 TRANSFAC + 142468147 142468163 0.0E+00 AAAAGCAAAACAAAACA 17 V_FOXJ3_06_M02855 TRANSFAC + 142468152 142468168 1.0E-06 CAAAACAAAACAAAAAC 17 NR1H2_RXRA_MA0115.1 JASPAR - 142468641 142468657 0.0E+00 CGAGGTCAAAGCTCAGG 17 V_ZFP161_04_M02933 TRANSFAC - 142468196 142468209 6.0E-06 GCCGCGCATGGCGC 14 V_NRF2_01_M00108 TRANSFAC + 142468316 142468325 6.0E-06 AACGGAAGAG 10 V_FOXO3_01_M00477 TRANSFAC - 142468154 142468167 6.0E-06 TTTTTGTTTTGTTT 14 V_OCT1_07_M00248 TRANSFAC + 142467938 142467949 4.0E-06 AGTATTGAAATT 12 V_SOX1_03_M02802 TRANSFAC - 142467937 142467952 4.0E-06 TTTAATTTCAATACTT 16 V_SOX2_Q6_M01272 TRANSFAC - 142468151 142468166 1.0E-05 TTTTGTTTTGTTTTGC 16 V_SP1_Q2_01_M00933 TRANSFAC + 142468620 142468629 4.0E-06 CCCCGCCCCC 10 V_RXRLXRB_01_M01198 TRANSFAC - 142468643 142468655 0.0E+00 AGGTCAAAGCTCA 13 V_HNF4_01_M00134 TRANSFAC - 142468640 142468658 3.0E-06 TCGAGGTCAAAGCTCAGGT 19 V_SP1_Q4_01_M00932 TRANSFAC - 142468618 142468630 5.0E-06 GGGGGGCGGGGCA 13 V_ELK1_03_M01163 TRANSFAC + 142468373 142468383 1.0E-05 AAGCGGAAGTG 11 V_PAX4_04_M00380 TRANSFAC + 142468146 142468175 5.0E-06 AAAAAGCAAAACAAAACAAAAACCCTTCCT 30 V_SMAD1_01_M01590 TRANSFAC + 142468152 142468163 6.0E-06 CAAAACAAAACA 12 V_SMAD1_01_M01590 TRANSFAC + 142468157 142468168 4.0E-06 CAAAACAAAAAC 12 V_TR4_03_M01782 TRANSFAC - 142468643 142468655 0.0E+00 AGGTCAAAGCTCA 13 V_NANOG_02_M01247 TRANSFAC + 142468148 142468167 0.0E+00 AAAGCAAAACAAAACAAAAA 20 V_NANOG_02_M01247 TRANSFAC + 142468153 142468172 2.0E-06 AAAACAAAACAAAAACCCTT 20 V_PPARG_01_M00512 TRANSFAC - 142468639 142468659 1.0E-06 CTCGAGGTCAAAGCTCAGGTT 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.