Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ACTL6B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51412 actin-like 6B chr7 - 100253584 - 100259084 100254084 Transcription Factor Binding Sites   Download all TFBS in the ACTL6B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 100250776 100250793 3.0E-06 AGTGTAAATATTGGGCTG 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 100250776 100250793 5.0E-06 CAGCCCAATATTTACACT 18 NFE2_bZIP_DBD_dimeric_11_1 SELEX + 100250799 100250809 6.0E-06 AGTGACTCATG 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 100250799 100250809 9.0E-06 CATGAGTCACT 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 100250776 100250787 9.0E-06 AGTGTAAATATT 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 100250755 100250763 4.0E-06 TATGCTAAT 9 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 100250776 100250786 3.0E-06 AGTGTAAATAT 11 POU2F3_POU_DBD_monomeric_9_1 SELEX - 100250755 100250763 3.0E-06 TATGCTAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX - 100250752 100250765 2.0E-06 TGTATGCTAATCAG 14 STAT1_MA0137.2 JASPAR - 100250684 100250698 6.0E-06 GTTTTCCTAGAACTG 15 NFYA_MA0060.1 JASPAR - 100254114 100254129 4.0E-06 GGCAGCCAATCGGCGG 16 SOX15_HMG_full_dimeric_15_3 SELEX + 100250752 100250766 7.0E-06 CTGATTAGCATACAT 15 POU2F2_POU_DBD_monomeric_11_1 SELEX - 100250754 100250764 7.0E-06 GTATGCTAATC 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 100250755 100250763 3.0E-06 TATGCTAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 100250755 100250763 3.0E-06 TATGCTAAT 9 Pax4_MA0068.1 JASPAR + 100250648 100250677 5.0E-06 AAAAAAAAAAAAAAAAAATTGAACACATTT 30 Pax4_MA0068.1 JASPAR + 100250649 100250678 6.0E-06 AAAAAAAAAAAAAAAAATTGAACACATTTT 30 Pax4_MA0068.1 JASPAR + 100250650 100250679 7.0E-06 AAAAAAAAAAAAAAAATTGAACACATTTTT 30 Pax4_MA0068.1 JASPAR + 100250651 100250680 2.0E-06 AAAAAAAAAAAAAAATTGAACACATTTTTT 30 Pax4_MA0068.1 JASPAR + 100250660 100250689 1.0E-06 AAAAAATTGAACACATTTTTTTTCCAGTTC 30 POU3F3_POU_DBD_monomeric_13_1 SELEX - 100250753 100250765 4.0E-06 TGTATGCTAATCA 13 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 100250693 100250703 9.0E-06 GAAAACAAAAA 11 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 100254153 100254162 6.0E-06 AGCAGCTGCC 10 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 100250778 100250791 9.0E-06 TGTAAATATTGGGC 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 100250778 100250791 6.0E-06 GCCCAATATTTACA 14 RFX3_RFX_DBD_dimeric_15_1 SELEX + 100254238 100254252 2.0E-06 CGTCGCTAAGGAACT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 100250693 100250703 9.0E-06 GAAAACAAAAA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX - 100250753 100250764 6.0E-06 GTATGCTAATCA 12 Stat3_MA0144.1 JASPAR + 100250687 100250696 8.0E-06 TTCTAGGAAA 10 JDP2_bZIP_full_dimeric_9_1 SELEX - 100250800 100250808 1.0E-05 ATGAGTCAC 9 POU2F1_POU_DBD_monomeric_12_1 SELEX - 100250754 100250765 7.0E-06 TGTATGCTAATC 12 Sox3_HMG_DBD_dimeric_17_3 SELEX - 100250751 100250767 9.0E-06 TATGTATGCTAATCAGG 17 FOXB1_forkhead_full_monomeric_9_1 SELEX + 100250778 100250786 5.0E-06 TGTAAATAT 9 POU3F2_POU_DBD_monomeric_12_1 SELEX - 100250753 100250764 3.0E-06 GTATGCTAATCA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 100250691 100250703 4.0E-06 AGGAAAACAAAAA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 100250776 100250786 1.0E-06 AGTGTAAATAT 11 V_STAT5A_Q6_M01890 TRANSFAC - 100250687 100250699 8.0E-06 TGTTTTCCTAGAA 13 V_TCF3_01_M01594 TRANSFAC - 100250691 100250703 5.0E-06 TTTTTGTTTTCCT 13 V_TCF3_01_M01594 TRANSFAC - 100250706 100250718 8.0E-06 CCTTTCTTGTGCA 13 V_BCL6_Q3_01_M02085 TRANSFAC - 100250687 100250696 6.0E-06 TTTCCTAGAA 10 V_XFD1_01_M00267 TRANSFAC + 100250776 100250789 3.0E-06 AGTGTAAATATTGG 14 V_FOXO4_02_M00476 TRANSFAC - 100250690 100250703 3.0E-06 TTTTTGTTTTCCTA 14 V_OCT1_Q5_01_M00930 TRANSFAC + 100250753 100250763 5.0E-06 TGATTAGCATA 11 V_SRY_02_M00160 TRANSFAC + 100250693 100250704 3.0E-06 GAAAACAAAAAG 12 V_OCT1_01_M00135 TRANSFAC - 100250750 100250768 4.0E-06 CTATGTATGCTAATCAGGC 19 V_POU2F3_01_M01476 TRANSFAC - 100250751 100250766 1.0E-06 ATGTATGCTAATCAGG 16 V_STAT5B_01_M00459 TRANSFAC - 100250684 100250698 4.0E-06 GTTTTCCTAGAACTG 15 V_OCT_C_M00210 TRANSFAC + 100250752 100250764 1.0E-06 CTGATTAGCATAC 13 V_PITX2_Q6_M02114 TRANSFAC + 100250812 100250821 1.0E-06 TGTAATCCCA 10 V_TCFAP2E_04_M02926 TRANSFAC - 100250675 100250688 0.0E+00 AACTGGAAAAAAAA 14 V_BACH1_01_M00495 TRANSFAC - 100250797 100250811 6.0E-06 GGCATGAGTCACTGT 15 V_HELIOSA_02_M01004 TRANSFAC + 100250688 100250698 6.0E-06 TCTAGGAAAAC 11 V_FREAC3_01_M00291 TRANSFAC + 100250774 100250789 7.0E-06 GGAGTGTAAATATTGG 16 V_ARID5A_03_M02736 TRANSFAC - 100250776 100250789 9.0E-06 CCAATATTTACACT 14 V_NFAT_Q6_M00302 TRANSFAC - 100250677 100250688 6.0E-06 AACTGGAAAAAA 12 V_BCL6_Q3_M01171 TRANSFAC + 100250685 100250694 8.0E-06 AGTTCTAGGA 10 V_GR_Q6_M00192 TRANSFAC - 100250665 100250683 7.0E-06 GAAAAAAAATGTGTTCAAT 19 V_XFD2_01_M00268 TRANSFAC + 100250776 100250789 6.0E-06 AGTGTAAATATTGG 14 V_STAT4_Q5_M02117 TRANSFAC + 100250687 100250696 1.0E-06 TTCTAGGAAA 10 V_STAT3_03_M01595 TRANSFAC + 100250685 100250700 1.0E-06 AGTTCTAGGAAAACAA 16 V_SOX11_03_M02795 TRANSFAC + 100250691 100250707 1.0E-05 AGGAAAACAAAAAGTTG 17 V_OCT_Q6_M00795 TRANSFAC + 100250753 100250763 6.0E-06 TGATTAGCATA 11 V_FOXO1_Q5_M01216 TRANSFAC + 100250693 100250701 5.0E-06 GAAAACAAA 9 V_NFYC_Q5_M02107 TRANSFAC - 100254114 100254127 6.0E-06 CAGCCAATCGGCGG 14 V_OCT2_01_M01368 TRANSFAC - 100250751 100250766 2.0E-06 ATGTATGCTAATCAGG 16 V_OCT1_Q6_M00195 TRANSFAC - 100250752 100250766 1.0E-06 ATGTATGCTAATCAG 15 V_NFY_01_M00287 TRANSFAC - 100254114 100254129 5.0E-06 GGCAGCCAATCGGCGG 16 V_FOXO3_01_M00477 TRANSFAC - 100250690 100250703 2.0E-06 TTTTTGTTTTCCTA 14 V_PITX2_Q2_M00482 TRANSFAC + 100250812 100250822 1.0E-06 TGTAATCCCAG 11 V_PLZF_02_M01075 TRANSFAC + 100250768 100250796 1.0E-06 GTAATAGGAGTGTAAATATTGGGCTGAGC 29 V_SRF_06_M02916 TRANSFAC - 100250670 100250686 9.0E-06 CTGGAAAAAAAATGTGT 17 V_NFYA_Q5_M02106 TRANSFAC - 100254114 100254127 1.0E-06 CAGCCAATCGGCGG 14 V_TCF3_05_M02920 TRANSFAC - 100250673 100250687 4.0E-06 ACTGGAAAAAAAATG 15 V_STAT1_Q6_M01823 TRANSFAC + 100250687 100250696 2.0E-06 TTCTAGGAAA 10 V_STAT1_05_M01260 TRANSFAC - 100250677 100250698 4.0E-06 GTTTTCCTAGAACTGGAAAAAA 22 V_STAT1_05_M01260 TRANSFAC + 100250684 100250705 4.0E-06 CAGTTCTAGGAAAACAAAAAGT 22 V_MIF1_01_M00279 TRANSFAC - 100254236 100254253 9.0E-06 CAGTTCCTTAGCGACGGT 18 V_PAX4_04_M00380 TRANSFAC + 100250647 100250676 0.0E+00 AAAAAAAAAAAAAAAAAAATTGAACACATT 30 V_PAX4_04_M00380 TRANSFAC + 100250649 100250678 0.0E+00 AAAAAAAAAAAAAAAAATTGAACACATTTT 30 V_PAX4_04_M00380 TRANSFAC + 100250652 100250681 4.0E-06 AAAAAAAAAAAAAATTGAACACATTTTTTT 30 V_PAX4_04_M00380 TRANSFAC + 100250655 100250684 2.0E-06 AAAAAAAAAAATTGAACACATTTTTTTTCC 30 V_AP2_Q3_M00800 TRANSFAC + 100254000 100254015 8.0E-06 GCCCGTGGGCGGTGGC 16 V_NANOG_02_M01247 TRANSFAC + 100250704 100250723 4.0E-06 GTTGCACAAGAAAGGAAAGG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.