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PDCD1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5133 programmed cell death 1 chr2 - 242800558 - 242806058 242801058 Transcription Factor Binding Sites   Download all TFBS in the PDCD1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 242801950 242801958 1.0E-06 GTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 242801949 242801958 1.0E-06 GTAATAAAAT 10 NF-kappaB_MA0061.1 JASPAR - 242805847 242805856 9.0E-06 GGGGATTCCC 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 242801949 242801958 2.0E-06 GTAATAAAAT 10 FOXL1_forkhead_full_dimeric_13_1 SELEX - 242797128 242797140 5.0E-06 TGCAAATAAATAG 13 NFKB1_MA0105.1 JASPAR + 242805846 242805856 1.0E-06 GGGGAATCCCC 11 NFKB1_MA0105.1 JASPAR - 242805846 242805856 0.0E+00 GGGGATTCCCC 11 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 242805845 242805857 0.0E+00 AGGGGAATCCCCG 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 242805845 242805857 0.0E+00 CGGGGATTCCCCT 13 IRF1_MA0050.1 JASPAR + 242801976 242801987 1.0E-05 AGAAATGAAACT 12 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 242801950 242801959 1.0E-06 TGTAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 242801950 242801958 1.0E-06 GTAATAAAA 9 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 242797129 242797139 2.0E-06 GCAAATAAATA 11 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 242801949 242801958 4.0E-06 GTAATAAAAT 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 242801949 242801959 4.0E-06 TGTAATAAAAT 11 SP1_MA0079.2 JASPAR - 242796186 242796195 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 242801155 242801164 9.0E-06 CCCCTCCTCC 10 FOXI1_MA0042.1 JASPAR + 242797126 242797137 2.0E-06 TGCTATTTATTT 12 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 242805874 242805887 4.0E-06 ATGGAAACTTCCCA 14 TFEB_bHLH_full_dimeric_10_1 SELEX - 242796269 242796278 8.0E-06 GTCACATGAC 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 242802113 242802124 5.0E-06 AAACATTAAAGC 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 242797129 242797139 3.0E-06 GCAAATAAATA 11 Gata1_MA0035.2 JASPAR - 242801920 242801930 1.0E-05 GGAGATAAGCA 11 NRL_bZIP_DBD_monomeric_11_1 SELEX + 242801983 242801993 8.0E-06 AAACTGCTGAT 11 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 242805845 242805857 0.0E+00 AGGGGAATCCCCG 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 242805845 242805857 0.0E+00 CGGGGATTCCCCT 13 Tp53_p53l_DBD_dimeric_17_1 SELEX - 242797156 242797172 5.0E-06 TCAAGTCAGGAGCAGGT 17 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 242801949 242801958 6.0E-06 GTAATAAAAT 10 RUNX1_MA0002.2 JASPAR - 242805117 242805127 2.0E-06 TCCTGTGGTTT 11 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 242801949 242801959 2.0E-06 TGTAATAAAAT 11 Sox2_MA0143.1 JASPAR + 242797098 242797112 9.0E-06 GCATTGTTCTTGTAA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 242797129 242797141 4.0E-06 GTGCAAATAAATA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 242801950 242801958 1.0E-06 GTAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 242801950 242801958 1.0E-06 GTAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 242801949 242801959 1.0E-06 TGTAATAAAAT 11 V_FOXP3_Q4_M00992 TRANSFAC - 242801736 242801752 5.0E-06 GTCAGGCTGTTGCAGGC 17 V_MAFK_03_M02776 TRANSFAC + 242801981 242801995 3.0E-06 TGAAACTGCTGATAT 15 V_RHOX11_01_M01347 TRANSFAC - 242801950 242801966 2.0E-06 CATTCGCTGTAATAAAA 17 V_ACAAT_B_M00309 TRANSFAC + 242797143 242797151 8.0E-06 CATTGGTGG 9 V_MEF2_02_M00231 TRANSFAC + 242802017 242802038 2.0E-06 TCATCAGCTTAAAATAACCGAA 22 V_IRF_Q6_01_M00972 TRANSFAC + 242801976 242801986 7.0E-06 AGAAATGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC + 242801974 242801989 4.0E-06 GGAGAAATGAAACTGC 16 V_P50P50_Q3_M01223 TRANSFAC + 242805845 242805857 4.0E-06 AGGGGAATCCCCG 13 V_IRF3_05_M02767 TRANSFAC + 242801046 242801059 8.0E-06 CGGAAGGGAAACTG 14 V_IRF3_05_M02767 TRANSFAC + 242801975 242801988 3.0E-06 GAGAAATGAAACTG 14 V_SP1_03_M02281 TRANSFAC - 242796186 242796195 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 242801155 242801164 9.0E-06 CCCCTCCTCC 10 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 242805844 242805855 7.0E-06 GGGATTCCCCTC 12 V_HEN1_01_M00068 TRANSFAC + 242796097 242796118 8.0E-06 GGTTGCCACAGCTGCGGTCCCT 22 V_AP4_Q6_02_M01860 TRANSFAC + 242796104 242796116 4.0E-06 ACAGCTGCGGTCC 13 V_AIRE_02_M01000 TRANSFAC + 242797127 242797151 2.0E-06 GCTATTTATTTGCACACATTGGTGG 25 V_LDSPOLYA_B_M00317 TRANSFAC - 242801962 242801977 3.0E-06 CTCCTGTTTTCCATTC 16 V_MEF2A_Q6_M02024 TRANSFAC - 242802023 242802032 2.0E-06 TATTTTAAGC 10 V_RHOX11_02_M01384 TRANSFAC - 242801950 242801966 1.0E-06 CATTCGCTGTAATAAAA 17 V_RUNX1_01_M02257 TRANSFAC - 242805117 242805127 2.0E-06 TCCTGTGGTTT 11 V_NFAT_Q6_M00302 TRANSFAC + 242800444 242800455 1.0E-05 CTTAGGAAAACT 12 V_NFAT_Q6_M00302 TRANSFAC + 242802132 242802143 3.0E-06 CAGTGGAAAAAG 12 V_SP4_03_M02810 TRANSFAC + 242801096 242801112 1.0E-06 GCTCCCGCCCCCTCTTC 17 V_KROX_Q6_M00982 TRANSFAC + 242801099 242801112 8.0E-06 CCCGCCCCCTCTTC 14 V_ZBP89_Q4_M01816 TRANSFAC - 242801151 242801160 2.0E-06 TCCTCCCCCA 10 V_ZBP89_Q4_M01816 TRANSFAC - 242801193 242801202 4.0E-06 CCCTCCCCCA 10 V_AP1_Q6_01_M00925 TRANSFAC + 242796160 242796168 2.0E-06 ATGACTCAA 9 V_NFKB_Q6_M00194 TRANSFAC + 242805845 242805858 1.0E-05 AGGGGAATCCCCGT 14 V_CDX2_01_M01449 TRANSFAC - 242801947 242801962 3.0E-06 CGCTGTAATAAAATGC 16 V_IRF_Q6_M00772 TRANSFAC - 242801047 242801061 5.0E-06 GACAGTTTCCCTTCC 15 V_IRF_Q6_M00772 TRANSFAC - 242805718 242805732 6.0E-06 TAGGGTTTCTCTTCT 15 V_CDX2_Q5_M00729 TRANSFAC + 242801946 242801959 3.0E-06 AGCATTTTATTACA 14 V_PAX5_01_M00143 TRANSFAC + 242806006 242806033 3.0E-06 GCCAAGGGCACCGCGGTGGGGAGGCAGC 28 V_MEF2_03_M00232 TRANSFAC + 242802017 242802038 6.0E-06 TCATCAGCTTAAAATAACCGAA 22 V_ISRE_01_M00258 TRANSFAC - 242801045 242801059 1.0E-06 CAGTTTCCCTTCCGC 15 V_ISRE_01_M00258 TRANSFAC - 242801974 242801988 0.0E+00 CAGTTTCATTTCTCC 15 V_ISRE_01_M00258 TRANSFAC - 242805716 242805730 3.0E-06 GGGTTTCTCTTCTCA 15 V_CDX1_01_M01373 TRANSFAC - 242801947 242801962 8.0E-06 CGCTGTAATAAAATGC 16 V_SP1SP3_Q4_M01219 TRANSFAC - 242796186 242796196 1.0E-05 CCCCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC + 242801100 242801110 5.0E-06 CCGCCCCCTCT 11 V_TAL1BETAE47_01_M00065 TRANSFAC - 242797086 242797101 2.0E-06 ATGCACAGATGGTCCC 16 V_NFKAPPAB50_01_M00051 TRANSFAC - 242805847 242805856 2.0E-06 GGGGATTCCC 10 V_ERBETA_Q5_M01875 TRANSFAC - 242801062 242801076 7.0E-06 TTCAACCTGACCTGG 15 V_GATA1_09_M02254 TRANSFAC - 242801920 242801930 1.0E-05 GGAGATAAGCA 11 V_BBX_04_M02843 TRANSFAC + 242805098 242805114 5.0E-06 TGAATGATAACAGTTTG 17 V_MEF2_Q6_01_M00941 TRANSFAC - 242802024 242802035 1.0E-06 GGTTATTTTAAG 12 V_ISGF3G_03_M02771 TRANSFAC + 242801975 242801989 9.0E-06 GAGAAATGAAACTGC 15 V_AP1_01_M00517 TRANSFAC - 242796158 242796170 4.0E-06 CCTTGAGTCATCA 13 V_SOX11_03_M02795 TRANSFAC - 242797094 242797110 8.0E-06 ACAAGAACAATGCACAG 17 V_SOX11_03_M02795 TRANSFAC + 242802195 242802211 1.0E-06 TTATGAACAAAGGGCCA 17 V_BLIMP1_Q6_M01066 TRANSFAC + 242801045 242801060 3.0E-06 GCGGAAGGGAAACTGT 16 V_ISGF4G_04_M02875 TRANSFAC + 242802110 242802123 1.0E-06 GGAAAACATTAAAG 14 V_ICSBP_Q6_M00699 TRANSFAC + 242801977 242801988 0.0E+00 GAAATGAAACTG 12 V_HOXD9_Q2_M01834 TRANSFAC + 242802113 242802122 5.0E-06 AAACATTAAA 10 V_AP1_Q4_01_M00926 TRANSFAC - 242796160 242796167 1.0E-05 TGAGTCAT 8 V_GATA1_05_M00346 TRANSFAC + 242805100 242805109 5.0E-06 AATGATAACA 10 V_MYOD_Q6_02_M02100 TRANSFAC - 242802057 242802065 4.0E-06 CAGCTGTCA 9 V_GABPBETA_Q3_M01876 TRANSFAC + 242801044 242801054 7.0E-06 AGCGGAAGGGA 11 V_MYF6_04_M02885 TRANSFAC - 242796260 242796274 1.0E-05 CATGACAGACCCACC 15 V_TAL1_01_M01591 TRANSFAC + 242801918 242801930 0.0E+00 CTTGCTTATCTCC 13 V_STRA13_01_M00985 TRANSFAC + 242796267 242796280 9.0E-06 CTGTCATGTGACCA 14 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 242801188 242801196 8.0E-06 GAGGGTGGG 9 V_TFEB_01_M01768 TRANSFAC + 242796269 242796278 8.0E-06 GTCATGTGAC 10 V_TFEB_01_M01768 TRANSFAC - 242796269 242796278 8.0E-06 GTCACATGAC 10 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 242797086 242797101 4.0E-06 ATGCACAGATGGTCCC 16 V_HEN1_02_M00058 TRANSFAC + 242796097 242796118 2.0E-06 GGTTGCCACAGCTGCGGTCCCT 22 V_HEN1_02_M00058 TRANSFAC - 242796097 242796118 4.0E-06 AGGGACCGCAGCTGTGGCAACC 22 V_RHOX11_05_M03099 TRANSFAC - 242801950 242801966 1.0E-06 CATTCGCTGTAATAAAA 17 V_GATA6_01_M00462 TRANSFAC + 242805100 242805109 9.0E-06 AATGATAACA 10 V_FRA1_Q5_M01267 TRANSFAC - 242796160 242796167 1.0E-05 TGAGTCAT 8 V_FPM315_01_M01587 TRANSFAC + 242801152 242801163 1.0E-06 GGGGGAGGAGGG 12 V_ZFP281_01_M01597 TRANSFAC + 242801151 242801161 9.0E-06 TGGGGGAGGAG 11 V_ZFP281_01_M01597 TRANSFAC + 242801193 242801203 9.0E-06 TGGGGGAGGGA 11 V_EGR1_06_M02744 TRANSFAC + 242801099 242801112 6.0E-06 CCCGCCCCCTCTTC 14 V_LEF1TCF1_Q4_M00978 TRANSFAC - 242802197 242802207 7.0E-06 CCTTTGTTCAT 11 V_IRF1_Q6_01_M01881 TRANSFAC - 242801975 242801988 5.0E-06 CAGTTTCATTTCTC 14 V_NFKAPPAB_01_M00054 TRANSFAC - 242805847 242805856 9.0E-06 GGGGATTCCC 10 V_SOX2_01_M02246 TRANSFAC + 242797098 242797112 9.0E-06 GCATTGTTCTTGTAA 15 V_ZFP281_04_M02831 TRANSFAC - 242801191 242801205 1.0E-06 TCTCCCTCCCCCACC 15 V_HFH3_01_M00289 TRANSFAC + 242797126 242797138 5.0E-06 TGCTATTTATTTG 13 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 242805117 242805124 1.0E-05 TGTGGTTT 8 V_SOX4_01_M01308 TRANSFAC + 242802200 242802207 1.0E-05 AACAAAGG 8 V_MEF2A_05_M01301 TRANSFAC - 242802024 242802035 1.0E-06 GGTTATTTTAAG 12 V_TFE_Q6_M01029 TRANSFAC + 242796270 242796277 1.0E-05 TCATGTGA 8 V_HOXA10_01_M01464 TRANSFAC - 242801946 242801961 0.0E+00 GCTGTAATAAAATGCT 16 V_HOXD10_01_M01375 TRANSFAC - 242801945 242801961 8.0E-06 GCTGTAATAAAATGCTC 17 V_RHOX11_06_M03100 TRANSFAC - 242801950 242801966 2.0E-06 CATTCGCTGTAATAAAA 17 V_SOX9_Q4_M01284 TRANSFAC + 242802199 242802209 3.0E-06 GAACAAAGGGC 11 V_NANOG_02_M01247 TRANSFAC - 242797093 242797112 1.0E-06 TTACAAGAACAATGCACAGA 20 V_TCF4_01_M01705 TRANSFAC - 242802146 242802154 5.0E-06 TCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.