Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

RAB9B


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
51209 RAB9B, member RAS oncogene family chrX -103086712 - 103092212 103087212

Transcription Factor Binding Sites

 
Download all TFBS in the RAB9B promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX21_TBX_full_dimeric_16_1 SELEX + 103086629 103086644 1.0E-06 AGTGAGATGTCACACA 16
TBX21_TBX_full_dimeric_16_1 SELEX - 103086629 103086644 2.0E-06 TGTGTGACATCTCACT 16
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 103087215 103087225 1.0E-05 GCCCCGCCCCC 11
KLF14_C2H2_DBD_monomeric_14_1 SELEX - 103087213 103087226 9.0E-06 GGCCCCGCCCCCTC 14
CUX1_CUT_DBD_dimeric_17_1 SELEX - 103083644 103083660 5.0E-06 ATTAATACATCATCATT 17
TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 103087143 103087154 9.0E-06 TGACAGCTGCCG 12
MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 103083642 103083655 0.0E+00 TACATCATCATTAT 14
SP1_MA0079.2 JASPAR - 103087215 103087224 7.0E-06 CCCCGCCCCC 10
SP4_C2H2_full_monomeric_17_1 SELEX - 103087212 103087228 6.0E-06 CGGGCCCCGCCCCCTCC 17
MGA_TBX_DBD_dimeric_18_1 SELEX + 103086628 103086645 0.0E+00 AAGTGAGATGTCACACAT 18
MGA_TBX_DBD_dimeric_18_1 SELEX - 103086628 103086645 0.0E+00 ATGTGTGACATCTCACTT 18
Nkx3-2_MA0122.1 JASPAR - 103087423 103087431 8.0E-06 CTAAGTGGA 9
Myf_MA0055.1 JASPAR - 103083678 103083689 0.0E+00 AAGCAACTGCAG 12
IRF3_IRF_full_trimeric_21_1 SELEX + 103083610 103083630 3.0E-06 TGAATATGGAAACCAAATGCT 21
NRF1_NRF_full_dimeric_12_1 SELEX + 103086711 103086722 6.0E-06 GGCGCATGCGCA 12
NRF1_NRF_full_dimeric_12_1 SELEX - 103086711 103086722 1.0E-06 TGCGCATGCGCC 12
NFE2L2_MA0150.1 JASPAR + 103086787 103086797 6.0E-06 ATTACTCAGCA 11
V_ZSCAN4_03_M02838 TRANSFAC - 103083705 103083721 0.0E+00 TATGTGTGCACATAACC 17
V_ZSCAN4_03_M02838 TRANSFAC + 103083706 103083722 0.0E+00 GTTATGTGCACACATAA 17
V_ZFP187_03_M02830 TRANSFAC + 103083649 103083662 1.0E-06 TGATGTATTAATAA 14
V_GM397_03_M02760 TRANSFAC - 103083705 103083721 1.0E-06 TATGTGTGCACATAACC 17
V_GM397_03_M02760 TRANSFAC + 103083706 103083722 0.0E+00 GTTATGTGCACACATAA 17
V_SP1_Q6_01_M00931 TRANSFAC + 103087216 103087225 4.0E-06 GGGGCGGGGC 10
V_CEBP_01_M00159 TRANSFAC + 103083700 103083712 1.0E-06 TATTTGGTTATGT 13
V_IRF3_05_M02767 TRANSFAC + 103083611 103083624 3.0E-06 GAATATGGAAACCA 14
V_IRF3_05_M02767 TRANSFAC - 103086891 103086904 9.0E-06 GAGAAAGGAAAGTC 14
V_HNF3_Q6_01_M01012 TRANSFAC + 103083695 103083712 3.0E-06 TTCCCTATTTGGTTATGT 18
V_SP1_03_M02281 TRANSFAC - 103087215 103087224 7.0E-06 CCCCGCCCCC 10
V_PU1_Q4_M01172 TRANSFAC - 103083754 103083772 1.0E-06 ACATTGCTTTTCCTCTTTT 19
V_MYF_01_M01302 TRANSFAC - 103083678 103083689 0.0E+00 AAGCAACTGCAG 12
V_TEF_Q6_M00672 TRANSFAC + 103083651 103083662 3.0E-06 ATGTATTAATAA 12
V_SP4_03_M02810 TRANSFAC - 103087210 103087226 1.0E-06 GGCCCCGCCCCCTCCCC 17
V_KROX_Q6_M00982 TRANSFAC - 103087210 103087223 0.0E+00 CCCGCCCCCTCCCC 14
V_RSRFC4_Q2_M00407 TRANSFAC + 103083650 103083666 6.0E-06 GATGTATTAATAACTGT 17
V_SP1_Q6_M00196 TRANSFAC + 103087214 103087226 0.0E+00 AGGGGGCGGGGCC 13
V_IRF_Q6_M00772 TRANSFAC + 103086889 103086903 6.0E-06 TAGACTTTCCTTTCT 15
V_BCL6_Q3_M01171 TRANSFAC - 103086621 103086630 8.0E-06 CTTTCTAGGT 10
V_HOX13_01_M00023 TRANSFAC - 103083630 103083659 0.0E+00 TTAATACATCATCATTATTCCTGGAGCTGA 30
V_SP1SP3_Q4_M01219 TRANSFAC - 103087212 103087222 1.0E-06 CCGCCCCCTCC 11
V_NCX_02_M01420 TRANSFAC + 103083649 103083665 7.0E-06 TGATGTATTAATAACTG 17
V_MAFK_Q3_M02022 TRANSFAC + 103086788 103086798 5.0E-06 TTACTCAGCAA 11
V_SRF_Q5_02_M01007 TRANSFAC + 103083692 103083710 4.0E-06 GCATTCCCTATTTGGTTAT 19
V_SP4_Q5_M01273 TRANSFAC - 103087215 103087225 1.0E-06 GCCCCGCCCCC 11
V_ELF1_Q6_M00746 TRANSFAC + 103083754 103083765 1.0E-06 AAAAGAGGAAAA 12
V_MYOD_Q6_02_M02100 TRANSFAC - 103087143 103087151 4.0E-06 CAGCTGTCA 9
V_TCF7_04_M02921 TRANSFAC + 103083651 103083665 5.0E-06 ATGTATTAATAACTG 15
V_ZFP206_01_M01742 TRANSFAC - 103086712 103086722 0.0E+00 TGCGCATGCGC 11
V_SRF_01_M00152 TRANSFAC - 103083693 103083710 4.0E-06 ATAACCAAATAGGGAATG 18
V_NRF1_Q6_M00652 TRANSFAC + 103086713 103086722 2.0E-06 CGCATGCGCA 10
V_RSRFC4_01_M00026 TRANSFAC - 103083650 103083665 7.0E-06 CAGTTATTAATACATC 16
V_DR3_Q4_M00966 TRANSFAC - 103087106 103087126 9.0E-06 GCCGCACTTGCTGCCCCATTG 21
V_SP1_Q2_01_M00933 TRANSFAC - 103087215 103087224 4.0E-06 CCCCGCCCCC 10
V_ARP1_01_M00155 TRANSFAC - 103083593 103083608 2.0E-06 TCAGTCCTTGACCTGT 16
V_NFE2L2_01_M02263 TRANSFAC + 103086787 103086797 6.0E-06 ATTACTCAGCA 11
V_SP1_Q4_01_M00932 TRANSFAC + 103087214 103087226 0.0E+00 AGGGGGCGGGGCC 13
V_GLIS2_04_M02863 TRANSFAC + 103083652 103083665 7.0E-06 TGTATTAATAACTG 14
V_NF1_Q6_M00193 TRANSFAC - 103083734 103083751 3.0E-06 CCTTGGCATAGAGCCTAT 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL