Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

HERC5


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
51191 HECT and RLD domain containing E3 ubiquitin protein ligase 5 chr4 +89373267 - 89378767 89378267

Transcription Factor Binding Sites

 
Download all TFBS in the HERC5 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 89377981 89377999 7.0E-06 GTTCCACTAGGAGGCACCC 19
SP8_C2H2_DBD_monomeric_12_1 SELEX - 89378242 89378253 2.0E-06 GCCACGCCCCCC 12
FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 89378174 89378186 2.0E-06 AAAAACAACAACA 13
SP3_C2H2_DBD_monomeric_11_1 SELEX - 89378243 89378253 3.0E-06 GCCACGCCCCC 11
NFIA_NFI_full_dimeric_15_1 SELEX + 89378114 89378128 2.0E-06 TTGGCCGCCTGCCAA 15
NFIA_NFI_full_dimeric_15_1 SELEX - 89378114 89378128 2.0E-06 TTGGCAGGCGGCCAA 15
IRF7_IRF_DBD_dimeric_14_1 SELEX - 89378194 89378207 4.0E-06 TGGAAAACGAAACA 14
KLF16_C2H2_DBD_monomeric_11_1 SELEX + 89378220 89378230 1.0E-05 GCCCCGCCCCC 11
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 89378243 89378253 1.0E-06 GCCACGCCCCC 11
NHLH1_MA0048.1 JASPAR + 89378299 89378310 1.0E-06 ACGCAGCTGCGC 12
NHLH1_MA0048.1 JASPAR - 89378299 89378310 0.0E+00 GCGCAGCTGCGT 12
NHLH1_MA0048.1 JASPAR + 89378309 89378320 1.0E-05 GCGCAGCTGGTT 12
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 89378174 89378190 0.0E+00 AAAAACAACAACAAACA 17
KLF14_C2H2_DBD_monomeric_14_1 SELEX - 89378241 89378254 5.0E-06 CGCCACGCCCCCCA 14
IRF8_IRF_full_dimeric_14_1 SELEX - 89378194 89378207 8.0E-06 TGGAAAACGAAACA 14
TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 89378338 89378348 4.0E-06 CGCCTGAGGCA 11
TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 89378338 89378348 6.0E-06 TGCCTCAGGCG 11
NFIX_NFI_full_dimeric_15_2 SELEX + 89378114 89378128 5.0E-06 TTGGCCGCCTGCCAA 15
NFIX_NFI_full_dimeric_15_2 SELEX - 89378114 89378128 6.0E-06 TTGGCAGGCGGCCAA 15
TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 89378338 89378348 5.0E-06 TGCCTCAGGCG 11
SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 89378101 89378113 9.0E-06 AGGCAACAGGTCG 13
IRF1_MA0050.1 JASPAR - 89378194 89378205 3.0E-06 GAAAACGAAACA 12
FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 89378183 89378196 8.0E-06 ACATAATGTTTGTT 14
Foxq1_MA0040.1 JASPAR - 89378183 89378193 9.0E-06 TAATGTTTGTT 11
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 89378180 89378190 9.0E-06 AACAACAAACA 11
SP1_MA0079.2 JASPAR + 89378221 89378230 7.0E-06 CCCCGCCCCC 10
Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 89378647 89378656 9.0E-06 ACCAGCTGCT 10
SP4_C2H2_full_monomeric_17_1 SELEX + 89378217 89378233 1.0E-06 CAGGCCCCGCCCCCAAA 17
SP4_C2H2_full_monomeric_17_1 SELEX - 89378240 89378256 5.0E-06 GACGCCACGCCCCCCAC 17
BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 89378004 89378020 7.0E-06 GGCTTTCGAGGAAACGC 17
CTCF_C2H2_full_monomeric_17_1 SELEX + 89377982 89377998 4.0E-06 GGTGCCTCCTAGTGGAA 17
SP1_C2H2_DBD_monomeric_11_1 SELEX - 89378243 89378253 5.0E-06 GCCACGCCCCC 11
SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 89378099 89378113 4.0E-06 AGGCAACAGGTCGTT 15
INSM1_MA0155.1 JASPAR - 89378224 89378235 6.0E-06 TGTTTGGGGGCG 12
IRF9_IRF_full_trimeric_15_1 SELEX - 89378143 89378157 1.0E-05 AAGGAAAAGGAAACT 15
TFAP2C_TFAP_full_dimeric_11_1 SELEX + 89378338 89378348 6.0E-06 CGCCTGAGGCA 11
TFAP2C_TFAP_full_dimeric_11_1 SELEX - 89378338 89378348 8.0E-06 TGCCTCAGGCG 11
NFIB_NFI_full_dimeric_15_1 SELEX + 89378114 89378128 2.0E-06 TTGGCCGCCTGCCAA 15
NFIB_NFI_full_dimeric_15_1 SELEX - 89378114 89378128 2.0E-06 TTGGCAGGCGGCCAA 15
IRF3_IRF_full_trimeric_21_1 SELEX - 89378136 89378156 2.0E-06 AGGAAAAGGAAACTGTAATGA 21
IRF3_IRF_full_trimeric_21_1 SELEX - 89378142 89378162 0.0E+00 TCGAAAAGGAAAAGGAAACTG 21
IRF3_IRF_full_trimeric_21_1 SELEX - 89378148 89378168 1.0E-06 GCGGAATCGAAAAGGAAAAGG 21
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 89378178 89378190 7.0E-06 ACAACAACAAACA 13
NHLH1_bHLH_full_dimeric_10_1 SELEX + 89378300 89378309 2.0E-06 CGCAGCTGCG 10
NHLH1_bHLH_full_dimeric_10_1 SELEX - 89378300 89378309 2.0E-06 CGCAGCTGCG 10
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 89378174 89378186 1.0E-06 AAAAACAACAACA 13
Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 89378338 89378348 4.0E-06 CGCCTGAGGCA 11
Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 89378338 89378348 1.0E-05 TGCCTCAGGCG 11
IRF2_MA0051.1 JASPAR - 89378138 89378155 2.0E-06 GGAAAAGGAAACTGTAAT 18
IRF2_MA0051.1 JASPAR - 89378189 89378206 3.0E-06 GGAAAACGAAACATAATG 18
Zfx_MA0146.1 JASPAR - 89378217 89378230 8.0E-06 GGGGGCGGGGCCTG 14
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 89378177 89378190 5.0E-06 AACAACAACAAACA 14
V_DMRT4_01_M01149 TRANSFAC - 89377627 89377639 7.0E-06 TATGTATCAAAAA 13
V_MINI20_B_M00324 TRANSFAC + 89378289 89378309 5.0E-06 CCCCGACGCCACGCAGCTGCG 21
V_FOXP1_01_M00987 TRANSFAC - 89378172 89378191 7.0E-06 ATGTTTGTTGTTGTTTTTAG 20
V_FOXP1_01_M00987 TRANSFAC - 89378174 89378193 0.0E+00 TAATGTTTGTTGTTGTTTTT 20
V_ZFP187_03_M02830 TRANSFAC - 89377627 89377640 1.0E-05 CTATGTATCAAAAA 14
V_BCL6B_03_M02740 TRANSFAC - 89378004 89378019 1.0E-06 GCTTTCGAGGAAACGC 16
V_DMRT3_01_M01148 TRANSFAC + 89377627 89377641 0.0E+00 TTTTTGATACATAGT 15
V_NF1_Q6_01_M00806 TRANSFAC + 89378114 89378130 6.0E-06 TTGGCCGCCTGCCAAGT 17
V_ZFX_01_M01593 TRANSFAC + 89378214 89378229 8.0E-06 CTGCAGGCCCCGCCCC 16
V_FOXJ2_02_M00423 TRANSFAC - 89378184 89378197 0.0E+00 AACATAATGTTTGT 14
V_SP1_Q6_01_M00931 TRANSFAC - 89378220 89378229 4.0E-06 GGGGCGGGGC 10
V_IRF2_Q6_M01882 TRANSFAC - 89378141 89378156 6.0E-06 AGGAAAAGGAAACTGT 16
V_IRF2_Q6_M01882 TRANSFAC - 89378147 89378162 7.0E-06 TCGAAAAGGAAAAGGA 16
V_IRF2_Q6_M01882 TRANSFAC - 89378192 89378207 2.0E-06 TGGAAAACGAAACATA 16
V_FOXO3A_Q1_M01137 TRANSFAC + 89378173 89378184 3.0E-06 TAAAAACAACAA 12
V_IRF3_05_M02767 TRANSFAC - 89378142 89378155 0.0E+00 GGAAAAGGAAACTG 14
V_IRF3_05_M02767 TRANSFAC - 89378193 89378206 9.0E-06 GGAAAACGAAACAT 14
V_MYB_05_M02779 TRANSFAC + 89379711 89379727 1.0E-06 AAAGAAACCGTTAGTCT 17
V_SP1_03_M02281 TRANSFAC + 89378221 89378230 7.0E-06 CCCCGCCCCC 10
V_HFH4_01_M00742 TRANSFAC - 89377931 89377943 4.0E-06 CAAAGTTTGTTAA 13
V_PITX2_Q6_M02114 TRANSFAC - 89377884 89377893 1.0E-06 TGTAATCCCA 10
V_AP4_Q6_02_M01860 TRANSFAC - 89378306 89378318 4.0E-06 CCAGCTGCGCGCA 13
V_AP4_Q6_01_M00927 TRANSFAC - 89378311 89378319 6.0E-06 ACCAGCTGC 9
V_AP4_Q6_01_M00927 TRANSFAC + 89378647 89378655 6.0E-06 ACCAGCTGC 9
V_TCFAP2E_04_M02926 TRANSFAC - 89377621 89377634 1.0E-06 ATCAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 89377622 89377635 3.0E-06 TATCAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 89377623 89377636 7.0E-06 GTATCAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 89379674 89379687 5.0E-06 CAGTTGAAAAAAAG 14
V_ELF4_04_M02850 TRANSFAC - 89377618 89377634 0.0E+00 ATCAAAAAAAAAAATGC 17
V_ELF4_04_M02850 TRANSFAC - 89377619 89377635 1.0E-06 TATCAAAAAAAAAAATG 17
V_ELF4_04_M02850 TRANSFAC - 89377620 89377636 1.0E-06 GTATCAAAAAAAAAAAT 17
V_GC_01_M00255 TRANSFAC - 89378218 89378231 0.0E+00 TGGGGGCGGGGCCT 14
V_HELIOSA_02_M01004 TRANSFAC - 89378149 89378159 6.0E-06 AAAAGGAAAAG 11
V_TCF3_04_M02816 TRANSFAC - 89377623 89377639 4.0E-06 TATGTATCAAAAAAAAA 17
V_POU3F2_01_M00463 TRANSFAC + 89377616 89377629 9.0E-06 ACGCATTTTTTTTT 14
V_ZFP105_03_M02827 TRANSFAC - 89377617 89377631 9.0E-06 AAAAAAAAAAATGCG 15
V_ZFP105_03_M02827 TRANSFAC - 89377619 89377633 7.0E-06 TCAAAAAAAAAAATG 15
V_ZFP105_03_M02827 TRANSFAC - 89377620 89377634 0.0E+00 ATCAAAAAAAAAAAT 15
V_ZFP105_03_M02827 TRANSFAC - 89377621 89377635 1.0E-06 TATCAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC + 89378173 89378187 0.0E+00 TAAAAACAACAACAA 15
V_ZFP105_03_M02827 TRANSFAC + 89378180 89378194 5.0E-06 AACAACAAACATTAT 15
V_OCT1_03_M00137 TRANSFAC - 89379738 89379750 6.0E-06 TTGGTAATAAGAA 13
V_TCFAP2C_03_M02821 TRANSFAC - 89378336 89378350 8.0E-06 ACTGCCTCAGGCGTT 15
V_HNF3G_Q4_M02015 TRANSFAC - 89378183 89378190 7.0E-06 TGTTTGTT 8
V_NFAT_Q6_M00302 TRANSFAC - 89378199 89378210 8.0E-06 CAGTGGAAAACG 12
V_SP1_Q6_M00196 TRANSFAC - 89378219 89378231 1.0E-06 TGGGGGCGGGGCC 13
V_FOXK1_04_M02856 TRANSFAC + 89378172 89378186 2.0E-06 CTAAAAACAACAACA 15
V_FOXK1_04_M02856 TRANSFAC + 89378175 89378189 0.0E+00 AAAACAACAACAAAC 15
V_IRF3_Q3_M01279 TRANSFAC + 89378146 89378158 2.0E-06 TTCCTTTTCCTTT 13
V_MYBL1_03_M02780 TRANSFAC + 89379711 89379727 1.0E-06 AAAGAAACCGTTAGTCT 17
V_HNF3_Q6_M00791 TRANSFAC + 89378180 89378192 4.0E-06 AACAACAAACATT 13
V_IRF_Q6_M00772 TRANSFAC + 89378140 89378154 1.0E-06 TACAGTTTCCTTTTC 15
V_IRF_Q6_M00772 TRANSFAC + 89378146 89378160 5.0E-06 TTCCTTTTCCTTTTC 15
V_IRF_Q6_M00772 TRANSFAC + 89378191 89378205 8.0E-06 TTATGTTTCGTTTTC 15
V_CDX2_Q5_M00729 TRANSFAC + 89379735 89379748 5.0E-06 CATTTCTTATTACC 14
V_MATH1_Q2_M01716 TRANSFAC - 89378646 89378655 3.0E-06 GCAGCTGGTG 10
V_TATA_C_M00216 TRANSFAC + 89379705 89379714 3.0E-06 TCTTTAAAAG 10
V_ASCL2_03_M02737 TRANSFAC + 89378644 89378660 8.0E-06 TTCACCAGCTGCTCGCC 17
V_ISRE_01_M00258 TRANSFAC + 89378142 89378156 0.0E+00 CAGTTTCCTTTTCCT 15
V_TCF7_03_M02817 TRANSFAC - 89377623 89377639 4.0E-06 TATGTATCAAAAAAAAA 17
V_VMYB_01_M00003 TRANSFAC - 89377946 89377955 6.0E-06 GATAACGGAA 10
V_STAT4_Q5_M02117 TRANSFAC + 89379708 89379717 2.0E-06 TTAAAAGAAA 10
V_ISGF3G_03_M02771 TRANSFAC - 89378192 89378206 3.0E-06 GGAAAACGAAACATA 15
V_INSM1_01_M02268 TRANSFAC - 89378224 89378235 6.0E-06 TGTTTGGGGGCG 12
V_FOXO1_Q5_M01216 TRANSFAC + 89378174 89378182 5.0E-06 AAAAACAAC 9
V_IRF7_01_M00453 TRANSFAC - 89378140 89378157 2.0E-06 AAGGAAAAGGAAACTGTA 18
V_IRF7_01_M00453 TRANSFAC - 89378191 89378208 7.0E-06 GTGGAAAACGAAACATAA 18
V_TFIII_Q6_M00706 TRANSFAC - 89377956 89377964 6.0E-06 AGAGGGAGG 9
V_SP4_Q5_M01273 TRANSFAC + 89378220 89378230 1.0E-06 GCCCCGCCCCC 11
V_MINI19_B_M00323 TRANSFAC + 89378289 89378309 2.0E-06 CCCCGACGCCACGCAGCTGCG 21
V_FAC1_01_M00456 TRANSFAC + 89378174 89378187 8.0E-06 AAAAACAACAACAA 14
V_FAC1_01_M00456 TRANSFAC + 89378177 89378190 1.0E-06 AACAACAACAAACA 14
V_TCF7_04_M02921 TRANSFAC - 89379769 89379783 7.0E-06 CCATATTACAAATGC 15
V_PITX2_Q2_M00482 TRANSFAC - 89377883 89377893 1.0E-06 TGTAATCCCAG 11
V_FOX_Q2_M00809 TRANSFAC - 89378181 89378193 4.0E-06 TAATGTTTGTTGT 13
V_ZFP281_01_M01597 TRANSFAC - 89378221 89378231 6.0E-06 TGGGGGCGGGG 11
V_IRF1_Q6_01_M01881 TRANSFAC + 89378142 89378155 8.0E-06 CAGTTTCCTTTTCC 14
V_TCFAP2B_04_M02924 TRANSFAC + 89378336 89378350 7.0E-06 AACGCCTGAGGCAGT 15
V_SRF_06_M02916 TRANSFAC - 89377618 89377634 1.0E-06 ATCAAAAAAAAAAATGC 17
V_SRF_06_M02916 TRANSFAC - 89377619 89377635 2.0E-06 TATCAAAAAAAAAAATG 17
V_SRF_06_M02916 TRANSFAC - 89377620 89377636 0.0E+00 GTATCAAAAAAAAAAAT 17
V_SRF_06_M02916 TRANSFAC + 89379706 89379722 6.0E-06 CTTTAAAAGAAACCGTT 17
V_FOXJ2_01_M00422 TRANSFAC + 89378178 89378195 2.0E-06 ACAACAACAAACATTATG 18
V_CTF1_01_M01196 TRANSFAC - 89378114 89378127 2.0E-06 TGGCAGGCGGCCAA 14
V_CTF1_01_M01196 TRANSFAC + 89378115 89378128 3.0E-06 TGGCCGCCTGCCAA 14
V_SP1_Q2_01_M00933 TRANSFAC + 89378221 89378230 4.0E-06 CCCCGCCCCC 10
V_AP2ALPHA_02_M01045 TRANSFAC + 89378336 89378350 4.0E-06 AACGCCTGAGGCAGT 15
V_AP2ALPHA_02_M01045 TRANSFAC - 89378336 89378350 1.0E-06 ACTGCCTCAGGCGTT 15
V_UF1H3BETA_Q6_M01068 TRANSFAC - 89378220 89378233 8.0E-06 TTTGGGGGCGGGGC 14
V_MAFK_04_M02880 TRANSFAC - 89377614 89377628 4.0E-06 AAAAAAAATGCGTTG 15
V_AP2ALPHA_03_M01047 TRANSFAC + 89378336 89378350 0.0E+00 AACGCCTGAGGCAGT 15
V_AP2ALPHA_03_M01047 TRANSFAC - 89378336 89378350 0.0E+00 ACTGCCTCAGGCGTT 15
V_TCFAP2E_03_M02822 TRANSFAC + 89378336 89378350 3.0E-06 AACGCCTGAGGCAGT 15
V_TCFAP2E_03_M02822 TRANSFAC - 89378336 89378350 5.0E-06 ACTGCCTCAGGCGTT 15
V_SP1_Q4_01_M00932 TRANSFAC - 89378219 89378231 1.0E-06 TGGGGGCGGGGCC 13
V_PBX1_04_M01357 TRANSFAC - 89377624 89377640 9.0E-06 CTATGTATCAAAAAAAA 17
V_TCF3_05_M02920 TRANSFAC - 89377620 89377634 2.0E-06 ATCAAAAAAAAAAAT 15
V_TCF3_05_M02920 TRANSFAC - 89377621 89377635 3.0E-06 TATCAAAAAAAAAAA 15
TLX1_NFIC_MA0119.1 JASPAR - 89378114 89378127 2.0E-06 TGGCAGGCGGCCAA 14
TLX1_NFIC_MA0119.1 JASPAR + 89378115 89378128 3.0E-06 TGGCCGCCTGCCAA 14
V_STAT1_Q6_M01823 TRANSFAC - 89378007 89378016 6.0E-06 TTCGAGGAAA 10
V_DMRT5_01_M01150 TRANSFAC + 89377628 89377642 1.0E-06 TTTTGATACATAGTC 15
V_NF1_Q6_M00193 TRANSFAC - 89378113 89378130 0.0E+00 ACTTGGCAGGCGGCCAAA 18
V_OCT4_01_M01125 TRANSFAC + 89379688 89379702 1.0E-05 ATTTGAAATGCTGAG 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL