Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SERPINA10 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51156 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 chr14 - 94758861 - 94764608 94759361 Transcription Factor Binding Sites   Download all TFBS in the SERPINA10 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 94759604 94759621 3.0E-06 TCAGCAAATATTTGCTAT 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 94759604 94759621 3.0E-06 ATAGCAAATATTTGCTGA 18 SOX10_HMG_full_dimeric_14_1 SELEX + 94759371 94759384 3.0E-06 TGTATGTACAGTCC 14 HNF1B_MA0153.1 JASPAR + 94759649 94759660 1.0E-06 TTACTGATTAAC 12 SOX8_HMG_DBD_dimeric_14_1 SELEX + 94759371 94759384 9.0E-06 TGTATGTACAGTCC 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 94759606 94759619 2.0E-06 AGCAAATATTTGCT 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 94759606 94759619 2.0E-06 AGCAAATATTTGCT 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 94759606 94759619 1.0E-06 AGCAAATATTTGCT 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 94759606 94759619 1.0E-06 AGCAAATATTTGCT 14 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 94759647 94759661 0.0E+00 GGTTACTGATTAACA 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 94759647 94759661 0.0E+00 TGTTAATCAGTAACC 15 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 94759545 94759558 5.0E-06 CTGGAAAAGTCCTT 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 94759606 94759619 3.0E-06 AGCAAATATTTGCT 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 94759606 94759619 3.0E-06 AGCAAATATTTGCT 14 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 94759648 94759660 0.0E+00 GTTACTGATTAAC 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 94759648 94759660 0.0E+00 GTTAATCAGTAAC 13 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 94759606 94759619 6.0E-06 AGCAAATATTTGCT 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 94759606 94759619 6.0E-06 AGCAAATATTTGCT 14 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 94759481 94759497 4.0E-06 CTGATTAGACTCATTGA 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 94759481 94759497 3.0E-06 TCAATGAGTCTAATCAG 17 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 94759647 94759661 0.0E+00 GGTTACTGATTAACA 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 94759647 94759661 0.0E+00 TGTTAATCAGTAACC 15 RORA_2_MA0072.1 JASPAR - 94759749 94759762 8.0E-06 GGGATTTGGGTCAT 14 HNF1A_MA0046.1 JASPAR + 94759647 94759660 0.0E+00 GGTTACTGATTAAC 14 V_KLF15_Q2_M01714 TRANSFAC - 94759718 94759731 5.0E-06 GAGCTGGGGAGTAT 14 V_HNF1_Q6_M00790 TRANSFAC - 94759645 94759662 2.0E-06 ATGTTAATCAGTAACCGT 18 V_HNF1_Q6_M00790 TRANSFAC + 94759646 94759663 1.0E-06 CGGTTACTGATTAACATC 18 V_HNF1B_04_M02266 TRANSFAC + 94759649 94759660 1.0E-06 TTACTGATTAAC 12 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 94759612 94759622 1.0E-05 TATTTGCTATT 11 V_HNF1_Q6_01_M01011 TRANSFAC - 94759644 94759664 7.0E-06 GGATGTTAATCAGTAACCGTC 21 V_TAXCREB_02_M00115 TRANSFAC + 94759749 94759763 7.0E-06 ATGACCCAAATCCCA 15 V_ELK1_01_M00007 TRANSFAC - 94759655 94759670 3.0E-06 CAAGCAGGATGTTAAT 16 V_GLI3_01_M01596 TRANSFAC + 94759528 94759538 9.0E-06 GTGTGTGGCCT 11 V_HNF1_01_M00132 TRANSFAC + 94759647 94759661 0.0E+00 GGTTACTGATTAACA 15 V_HNF1_01_M00132 TRANSFAC - 94759647 94759661 9.0E-06 TGTTAATCAGTAACC 15 V_MYOGNF1_01_M00056 TRANSFAC - 94759747 94759775 3.0E-06 AAGCTCTCGTGATGGGATTTGGGTCATAT 29 V_PLZF_02_M01075 TRANSFAC - 94759548 94759576 1.0E-06 TGGTTTCTGCTCTAAATGAAGGACTTTTC 29 V_CMAF_01_M01070 TRANSFAC - 94759596 94759614 6.0E-06 ATATTTGCTGAAGGTTCTG 19 V_HNF1A_01_M02162 TRANSFAC + 94759647 94759660 0.0E+00 GGTTACTGATTAAC 14 V_RORA2_01_M00157 TRANSFAC - 94759749 94759761 6.0E-06 GGATTTGGGTCAT 13 V_HSF1_Q6_01_M02017 TRANSFAC + 94759678 94759691 9.0E-06 GGAGTTTCTGGAAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.