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SDF4


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
51150 stromal cell derived factor 4 chr1 -1166947 - 1172447 1167447

Transcription Factor Binding Sites

 
Download all TFBS in the SDF4 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Pax5_MA0014.1 JASPAR + 1166926 1166945 4.0E-06 GGCGCAGGGAAGCGGGGCAG 20
Myc_MA0147.1 JASPAR + 1167890 1167899 4.0E-06 AGCACGTGGC 10
Myc_MA0147.1 JASPAR + 1168092 1168101 4.0E-06 AGCACGTGGC 10
HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 1166280 1166291 1.0E-06 AGTCGTAAAACA 12
RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 1166800 1166817 9.0E-06 AAAGCTCAACAGGGTTCA 18
SOX9_HMG_full_dimeric_16_1 SELEX - 1166307 1166322 6.0E-06 AACAAAGTACAGTCTC 16
SOX8_HMG_DBD_dimeric_16_1 SELEX - 1166307 1166322 7.0E-06 AACAAAGTACAGTCTC 16
ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 1167459 1167475 6.0E-06 GAGGTTGACCAATGACA 17
RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 1166801 1166817 3.0E-06 AAGCTCAACAGGGTTCA 17
Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 1166800 1166817 1.0E-06 AAAGCTCAACAGGGTTCA 18
NFYA_MA0060.1 JASPAR - 1167500 1167515 9.0E-06 GGCGGCCAATCGGCGG 16
HOXD11_homeodomain_DBD_monomeric_10_1 SELEX + 1166281 1166290 2.0E-06 GTCGTAAAAC 10
HOXC11_homeodomain_full_monomeric_11_1 SELEX + 1166280 1166290 1.0E-06 AGTCGTAAAAC 11
Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX + 1166281 1166290 4.0E-06 GTCGTAAAAC 10
RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 1166801 1166817 3.0E-06 AAGCTCAACAGGGTTCA 17
HOXC11_homeodomain_DBD_monomeric_11_1 SELEX + 1166280 1166290 2.0E-06 AGTCGTAAAAC 11
RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX + 1166801 1166817 2.0E-06 AAGCTCAACAGGGTTCA 17
Mycn_MA0104.2 JASPAR + 1167890 1167899 2.0E-06 AGCACGTGGC 10
Mycn_MA0104.2 JASPAR + 1168092 1168101 2.0E-06 AGCACGTGGC 10
ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 1166670 1166684 3.0E-06 AACACACCCTTGCAA 15
Stat3_MA0144.1 JASPAR - 1167829 1167838 6.0E-06 TGCCAGGAAG 10
Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX + 1166280 1166291 2.0E-06 AGTCGTAAAACA 12
MTF1_C2H2_DBD_monomeric_14_1 SELEX - 1166293 1166306 8.0E-06 TTTGCACACAGCGT 14
HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 1166281 1166290 5.0E-06 GTCGTAAAAC 10
VDR_nuclearreceptor_full_dimeric_16_1 SELEX + 1166896 1166911 7.0E-06 GGGTCCACGCGGTTCA 16
Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX + 1166281 1166289 2.0E-06 GTCGTAAAA 9
HOXD12_homeodomain_DBD_monomeric_11_1 SELEX + 1166280 1166290 0.0E+00 AGTCGTAAAAC 11
ETV6_ETS_full_dimeric_15_1 SELEX + 1166909 1166923 2.0E-06 TCAGAAGCGGAAGCG 15
NRF1_NRF_full_dimeric_12_1 SELEX - 1166920 1166931 1.0E-05 TGCGCCTGCGCT 12
NRF1_NRF_full_dimeric_12_1 SELEX + 1167579 1167590 3.0E-06 TGCGCACGCGCA 12
NRF1_NRF_full_dimeric_12_1 SELEX - 1167579 1167590 4.0E-06 TGCGCGTGCGCA 12
HOXC12_homeodomain_DBD_monomeric_11_1 SELEX + 1166280 1166290 1.0E-06 AGTCGTAAAAC 11
V_MEQ_01_M02049 TRANSFAC + 1166779 1166787 7.0E-06 AACACACAC 9
V_USF_Q6_M00187 TRANSFAC - 1167488 1167497 2.0E-06 GTCACGTGGC 10
V_YY1_02_M00069 TRANSFAC + 1167348 1167367 3.0E-06 CCACTGCCATCTTTCTTGCG 20
V_MAX_Q6_M01830 TRANSFAC - 1167891 1167902 1.0E-06 CAAGCCACGTGC 12
V_NRSF_Q4_M01028 TRANSFAC + 1166248 1166266 3.0E-06 CACCTCCTCCTGGTGCTGA 19
V_BCL6B_03_M02740 TRANSFAC - 1166317 1166332 8.0E-06 TTTCTCTAGGAACAAA 16
V_NFY_Q6_M00185 TRANSFAC + 1167464 1167474 4.0E-06 TGACCAATGAC 11
V_ZFX_01_M01593 TRANSFAC - 1167231 1167246 3.0E-06 CTGCAGGCCGCGGGGC 16
V_STAT3STAT3_Q3_M01220 TRANSFAC - 1166650 1166663 8.0E-06 TTGCTGGGAACTGA 14
V_MTF1_Q4_M00650 TRANSFAC - 1166293 1166306 1.0E-05 TTTGCACACAGCGT 14
V_GABP_B_M00341 TRANSFAC + 1166914 1166925 4.0E-06 AGCGGAAGCGCA 12
V_YY1_Q6_M00793 TRANSFAC + 1167353 1167361 7.0E-06 GCCATCTTT 9
V_CMYC_02_M01154 TRANSFAC + 1168091 1168102 4.0E-06 GAGCACGTGGCC 12
V_CMYC_02_M01154 TRANSFAC - 1168091 1168102 4.0E-06 GGCCACGTGCTC 12
V_WT1_Q6_01_M02036 TRANSFAC - 1167368 1167377 4.0E-06 CGCCCCCGCC 10
V_MYC_01_M02250 TRANSFAC + 1167890 1167899 4.0E-06 AGCACGTGGC 10
V_MYC_01_M02250 TRANSFAC + 1168092 1168101 4.0E-06 AGCACGTGGC 10
V_MYCMAX_01_M00118 TRANSFAC + 1168090 1168103 5.0E-06 CGAGCACGTGGCCT 14
V_MYCMAX_01_M00118 TRANSFAC - 1168090 1168103 5.0E-06 AGGCCACGTGCTCG 14
V_HNF4_01_B_M00411 TRANSFAC - 1166311 1166325 9.0E-06 AGGAACAAAGTACAG 15
V_CMYC_01_M01145 TRANSFAC - 1168091 1168102 2.0E-06 GGCCACGTGCTC 12
V_HOXD12_01_M01380 TRANSFAC + 1166277 1166293 1.0E-06 TACAGTCGTAAAACACA 17
MYC_MAX_MA0059.1 JASPAR + 1168091 1168101 4.0E-06 GAGCACGTGGC 11
V_ZF5_B_M00333 TRANSFAC + 1167927 1167939 0.0E+00 TGTGGGCGCGCTT 13
V_EGR1_Q6_M01873 TRANSFAC + 1167369 1167378 4.0E-06 GCGGGGGCGG 10
V_HOXC11_01_M01329 TRANSFAC + 1166277 1166292 0.0E+00 TACAGTCGTAAAACAC 16
V_HOXD11_01_M01434 TRANSFAC + 1166277 1166293 0.0E+00 TACAGTCGTAAAACACA 17
V_REX1_03_M01744 TRANSFAC + 1166148 1166159 8.0E-06 AACATGGCTGAG 12
V_HOXC12_01_M01437 TRANSFAC + 1166277 1166293 4.0E-06 TACAGTCGTAAAACACA 17
V_WHN_B_M00332 TRANSFAC + 1166710 1166720 9.0E-06 AGAGACGCTAT 11
V_HOXA11_01_M01378 TRANSFAC + 1166277 1166292 0.0E+00 TACAGTCGTAAAACAC 16
V_MYCN_01_M02259 TRANSFAC + 1167890 1167899 2.0E-06 AGCACGTGGC 10
V_MYCN_01_M02259 TRANSFAC + 1168092 1168101 2.0E-06 AGCACGTGGC 10
V_STAT3_03_M01595 TRANSFAC - 1167825 1167840 2.0E-06 ACTGCCAGGAAGGCGG 16
V_SMAD3_03_M02794 TRANSFAC + 1166829 1166845 8.0E-06 CTGAGCCAGACATCAAG 17
V_ZFP206_01_M01742 TRANSFAC + 1167579 1167589 3.0E-06 TGCGCACGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 1167580 1167590 7.0E-06 TGCGCGTGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 1167607 1167617 1.0E-06 TGCGCAGGCGC 11
V_ZFP161_04_M02933 TRANSFAC - 1167746 1167759 1.0E-06 GCCGCGCAGCGCGC 14
V_NRF1_Q6_M00652 TRANSFAC - 1167579 1167588 6.0E-06 CGCGTGCGCA 10
V_PLZF_02_M01075 TRANSFAC + 1166322 1166350 5.0E-06 TCCTAGAGAAAATAAAGCTAGTTCTTGAT 29
V_LEF1TCF1_Q4_M00978 TRANSFAC + 1166315 1166325 9.0E-06 ACTTTGTTCCT 11
V_HOXC10_01_M01361 TRANSFAC + 1166277 1166292 1.0E-06 TACAGTCGTAAAACAC 16
V_NFYA_Q5_M02106 TRANSFAC - 1167500 1167513 3.0E-06 CGGCCAATCGGCGG 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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