Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

HSD17B12 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51144 hydroxysteroid (17-beta) dehydrogenase 12 chr11 + 43697142 - 43702642 43702142 Transcription Factor Binding Sites   Download all TFBS in the HSD17B12 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MESP1_bHLH_DBD_dimeric_10_1 SELEX - 43701895 43701904 2.0E-06 AACACCTGTA 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 43702909 43702925 4.0E-06 TATTTTAAAAACACTTA 17 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 43702820 43702830 9.0E-06 CTTAAAGGGCA 11 NFYA_MA0060.1 JASPAR + 43702058 43702073 2.0E-06 TGCAGCCAATGAGAGA 16 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 43707103 43707114 6.0E-06 GTTAAAAATAAT 12 Pax4_MA0068.1 JASPAR - 43703329 43703358 5.0E-06 AGATAATTTTCCCTATTTCCTCAACCTGAC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 43703799 43703812 3.0E-06 TGAAAAAGGAAGTG 14 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 43703326 43703343 4.0E-06 AAGGTCAGGTTGAGGAAA 18 TCF4_bHLH_full_dimeric_10_1 SELEX - 43701895 43701904 1.0E-06 AACACCTGTA 10 MEF2A_MA0052.1 JASPAR + 43707104 43707113 7.0E-06 TTATTTTTAA 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX - 43701895 43701904 2.0E-06 AACACCTGTA 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 43703267 43703280 8.0E-06 GTAAAGAGTGAACC 14 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 43698558 43698574 5.0E-06 AGTTCAACTAAAGGCCC 17 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 43703327 43703343 8.0E-06 AGGTCAGGTTGAGGAAA 17 NFATC1_NFAT_full_dimeric_15_1 SELEX - 43703038 43703052 1.0E-05 ATTCCGCAGTGCAAA 15 VENTX_homeodomain_DBD_dimeric_21_1 SELEX - 43703080 43703100 3.0E-06 GCCAAATCCAGATACGATTAC 21 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 43703249 43703264 1.0E-06 GTAGGAAAAAGTATAC 16 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX + 43703324 43703343 3.0E-06 CGAAGGTCAGGTTGAGGAAA 20 SPI1_ETS_full_monomeric_14_1 SELEX + 43703799 43703812 7.0E-06 TGAAAAAGGAAGTG 14 TCF3_bHLH_DBD_dimeric_10_1 SELEX - 43701895 43701904 1.0E-06 AACACCTGTA 10 Zfx_MA0146.1 JASPAR + 43701866 43701879 5.0E-06 CCCGCCTCGGCCTC 14 Zfx_MA0146.1 JASPAR - 43702585 43702598 7.0E-06 ACGGCCCAGGCCTG 14 V_SPI1_01_M01203 TRANSFAC + 43703799 43703815 7.0E-06 TGAAAAAGGAAGTGAAA 17 V_SOX40_04_M02908 TRANSFAC - 43701932 43701947 3.0E-06 AAAGATTATAGTAAGA 16 V_ZFX_01_M01593 TRANSFAC + 43702582 43702597 3.0E-06 GACCAGGCCTGGGCCG 16 V_BCL6_01_M01183 TRANSFAC + 43702917 43702932 5.0E-06 TTTAAAATAAAGTTTT 16 V_BCL6_01_M01183 TRANSFAC - 43703256 43703271 9.0E-06 TTTACGGGTATACTTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 43707097 43707108 1.0E-05 AATAATCTCAAG 12 V_MMEF2_Q6_M00405 TRANSFAC - 43697954 43697969 1.0E-05 GGTTTTAAATATCAGC 16 V_MMEF2_Q6_M00405 TRANSFAC + 43702914 43702929 4.0E-06 GTTTTTAAAATAAAGT 16 V_MMEF2_Q6_M00405 TRANSFAC - 43703303 43703318 5.0E-06 CATTTTAAAAATCCTC 16 V_MMEF2_Q6_M00405 TRANSFAC - 43707102 43707117 3.0E-06 GAGGTTAAAAATAATC 16 V_GATA3_03_M00351 TRANSFAC - 43701938 43701947 5.0E-06 AAAGATTATA 10 V_IK_Q5_M01169 TRANSFAC - 43701875 43701884 3.0E-06 TTTGGGAGGC 10 V_IRF_Q6_01_M00972 TRANSFAC + 43703806 43703816 5.0E-06 GGAAGTGAAAT 11 V_NFAT3_Q3_M01734 TRANSFAC - 43703251 43703260 6.0E-06 ACTTTTTCCT 10 V_GKLF_02_M01588 TRANSFAC - 43703955 43703966 7.0E-06 ACCACGCCCAGC 12 V_TR4_Q2_M01725 TRANSFAC - 43703324 43703334 9.0E-06 CCTGACCTTCG 11 V_PITX2_Q6_M02114 TRANSFAC - 43701889 43701898 1.0E-06 TGTAATCCCA 10 V_PU1_Q4_M01172 TRANSFAC - 43703800 43703818 0.0E+00 ACATTTCACTTCCTTTTTC 19 V_LYF1_01_M00141 TRANSFAC - 43701876 43701884 9.0E-06 TTTGGGAGG 9 V_MEF2A_Q6_M02024 TRANSFAC + 43697959 43697968 5.0E-06 TATTTAAAAC 10 V_MEF2A_Q6_M02024 TRANSFAC - 43702916 43702925 2.0E-06 TATTTTAAAA 10 V_MEF2A_Q6_M02024 TRANSFAC + 43707105 43707114 1.0E-06 TATTTTTAAC 10 V_REX1_01_M01695 TRANSFAC - 43702175 43702184 2.0E-06 TCAGCCATTA 10 V_RPC155_01_M01798 TRANSFAC - 43701836 43701851 3.0E-06 TTAGGAGTCCGAGACC 16 V_ELF4_04_M02850 TRANSFAC + 43702914 43702930 9.0E-06 GTTTTTAAAATAAAGTT 17 V_ELF4_04_M02850 TRANSFAC + 43702915 43702931 2.0E-06 TTTTTAAAATAAAGTTT 17 V_ELF4_04_M02850 TRANSFAC - 43707099 43707115 8.0E-06 GGTTAAAAATAATCTCA 17 V_HELIOSA_02_M01004 TRANSFAC + 43703248 43703258 9.0E-06 TGTAGGAAAAA 11 V_POU3F2_01_M00463 TRANSFAC + 43697976 43697989 5.0E-06 CTGGATAAAATCAT 14 V_SOX7_04_M02911 TRANSFAC - 43703099 43703120 1.0E-06 TTTGTAATTGTATGAAATAGGC 22 V_POLY_C_M00212 TRANSFAC + 43702921 43702938 1.0E-06 AAATAAAGTTTTTCGCTC 18 V_IRF5_04_M02873 TRANSFAC - 43703133 43703147 0.0E+00 TTTAGCGAGAATTCC 15 V_NKX61_01_M00424 TRANSFAC - 43703108 43703120 2.0E-06 TTTGTAATTGTAT 13 V_RSRFC4_Q2_M00407 TRANSFAC - 43707100 43707116 2.0E-06 AGGTTAAAAATAATCTC 17 V_AMEF2_Q6_M00403 TRANSFAC - 43707100 43707117 1.0E-06 GAGGTTAAAAATAATCTC 18 V_E47_02_M00071 TRANSFAC + 43701892 43701907 1.0E-06 GATTACAGGTGTTAGC 16 V_STAT5A_02_M00460 TRANSFAC - 43703247 43703270 4.0E-06 TTACGGGTATACTTTTTCCTACAA 24 V_HNF1_Q6_01_M01011 TRANSFAC - 43707098 43707118 8.0E-06 AGAGGTTAAAAATAATCTCAA 21 V_MEF2_03_M00232 TRANSFAC + 43702910 43702931 6.0E-06 AAGTGTTTTTAAAATAAAGTTT 22 V_MEF2_03_M00232 TRANSFAC - 43707099 43707120 9.0E-06 AAAGAGGTTAAAAATAATCTCA 22 V_TATA_C_M00216 TRANSFAC + 43703124 43703133 5.0E-06 CCTTTAAAAG 10 V_ELF5_01_M01197 TRANSFAC + 43703335 43703345 1.0E-05 TTGAGGAAATA 11 V_ELF5_01_M01197 TRANSFAC + 43703802 43703812 6.0E-06 AAAAGGAAGTG 11 V_YY1_Q6_02_M01035 TRANSFAC - 43703313 43703323 1.0E-06 TCCTCCATTTT 11 V_REST_01_M01256 TRANSFAC - 43702372 43702393 8.0E-06 GGAGAGCGCTCTCCATGGCTTT 22 V_PPARG_03_M00528 TRANSFAC + 43703316 43703332 7.0E-06 ATGGAGGACGAAGGTCA 17 V_MEF2_04_M00233 TRANSFAC - 43701791 43701812 7.0E-06 GTCTCTACTAAAAATACAAAAA 22 V_GRE_C_M00205 TRANSFAC + 43702877 43702892 6.0E-06 GTCACACGCTGTCCTC 16 V_DAX1_01_M01248 TRANSFAC + 43703319 43703338 1.0E-06 GAGGACGAAGGTCAGGTTGA 20 V_PNR_01_M01650 TRANSFAC + 43697982 43697995 6.0E-06 AAAATCATATATTA 14 V_ISGF4G_04_M02875 TRANSFAC - 43702921 43702934 7.0E-06 GAAAAACTTTATTT 14 V_ELF1_Q6_M00746 TRANSFAC + 43703333 43703344 9.0E-06 GGTTGAGGAAAT 12 V_CAAT_01_M00254 TRANSFAC + 43702058 43702069 7.0E-06 TGCAGCCAATGA 12 V_ALPHACP1_01_M00687 TRANSFAC + 43702060 43702070 0.0E+00 CAGCCAATGAG 11 V_HAND1E47_01_M00222 TRANSFAC + 43703082 43703097 0.0E+00 AATCGTATCTGGATTT 16 V_NFYC_Q5_M02107 TRANSFAC + 43702017 43702030 3.0E-06 CGGCCAATCCGAGC 14 V_NFYC_Q5_M02107 TRANSFAC + 43702060 43702073 3.0E-06 CAGCCAATGAGAGA 14 V_AREB6_02_M00413 TRANSFAC - 43701894 43701905 5.0E-06 TAACACCTGTAA 12 V_FOXL1_02_M02857 TRANSFAC + 43702915 43702930 7.0E-06 TTTTTAAAATAAAGTT 16 V_HDX_01_M01333 TRANSFAC + 43697977 43697993 3.0E-06 TGGATAAAATCATATAT 17 V_PARP_Q3_M01211 TRANSFAC + 43703250 43703259 8.0E-06 TAGGAAAAAG 10 V_CDP_01_M00095 TRANSFAC - 43702941 43702952 3.0E-06 CCAATATTCAAA 12 V_TCF7_04_M02921 TRANSFAC - 43702914 43702928 5.0E-06 CTTTATTTTAAAAAC 15 V_NFY_01_M00287 TRANSFAC + 43702058 43702073 2.0E-06 TGCAGCCAATGAGAGA 16 V_PITX2_Q2_M00482 TRANSFAC - 43701888 43701898 1.0E-06 TGTAATCCCAG 11 V_RSRFC4_01_M00026 TRANSFAC + 43707101 43707116 2.0E-06 AGATTATTTTTAACCT 16 V_MYF6_03_M02781 TRANSFAC - 43703783 43703798 2.0E-06 GAGAAACAGGTGACTG 16 V_SREBP1_02_M00221 TRANSFAC - 43702087 43702097 7.0E-06 TCTCACCCCAC 11 V_SRF_06_M02916 TRANSFAC + 43702915 43702931 5.0E-06 TTTTTAAAATAAAGTTT 17 V_SOX18_04_M02905 TRANSFAC + 43698597 43698612 1.0E-06 GTACCAAATTCAATTA 16 V_MEF2_01_M00006 TRANSFAC + 43703125 43703140 9.0E-06 CTTTAAAAGGAATTCT 16 V_MEF2_01_M00006 TRANSFAC - 43707100 43707115 0.0E+00 GGTTAAAAATAATCTC 16 V_HMEF2_Q6_M00406 TRANSFAC - 43707100 43707115 1.0E-06 GGTTAAAAATAATCTC 16 V_CP2_01_M00072 TRANSFAC + 43701994 43702004 2.0E-06 GCTCAAACCAG 11 V_NFYA_Q5_M02106 TRANSFAC + 43702017 43702030 4.0E-06 CGGCCAATCCGAGC 14 V_NFYA_Q5_M02106 TRANSFAC + 43702060 43702073 0.0E+00 CAGCCAATGAGAGA 14 V_SREBP1_Q5_M01173 TRANSFAC - 43702085 43702099 7.0E-06 TGTCTCACCCCACCG 15 V_PAX4_04_M00380 TRANSFAC - 43707082 43707111 2.0E-06 AAAAATAATCTCAAGTTCCTGGCACATTTC 30 V_PPARA_01_M00242 TRANSFAC + 43703313 43703332 5.0E-06 AAAATGGAGGACGAAGGTCA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.