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RNFT1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51136 ring finger protein, transmembrane 1 chr17 - 58041617 - 58047117 58042117 Transcription Factor Binding Sites   Download all TFBS in the RNFT1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX21_HMG_DBD_dimeric_15_1 SELEX + 58045962 58045976 0.0E+00 AGCAATTGTAATGTT 15 SOX4_HMG_DBD_dimeric_16_1 SELEX + 58045961 58045976 5.0E-06 TAGCAATTGTAATGTT 16 SOX10_HMG_full_dimeric_16_1 SELEX + 58042354 58042369 2.0E-06 AAAAATGTTCAGGCTT 16 SPIC_ETS_full_monomeric_14_1 SELEX + 58041815 58041828 1.0E-06 AAAAAAGGGAAGAA 14 SRY_HMG_DBD_dimeric_15_1 SELEX - 58045962 58045976 7.0E-06 AACATTACAATTGCT 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 58042169 58042179 1.0E-05 GCCCCGCCCCC 11 SOX2_HMG_full_dimeric_17_1 SELEX - 58045961 58045977 9.0E-06 TAACATTACAATTGCTA 17 SOX9_HMG_full_dimeric_16_1 SELEX + 58042354 58042369 7.0E-06 AAAAATGTTCAGGCTT 16 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 58041758 58041769 1.0E-06 TCTATAAATAAC 12 IRF8_IRF_full_dimeric_14_1 SELEX - 58041646 58041659 5.0E-06 CTGAAACCCAAACC 14 SOX8_HMG_DBD_dimeric_16_1 SELEX + 58042354 58042369 3.0E-06 AAAAATGTTCAGGCTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX + 58045956 58045971 1.0E-06 GACAATAGCAATTGTA 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 58045956 58045971 1.0E-06 TACAATTGCTATTGTC 16 SOX8_HMG_full_dimeric_15_1 SELEX + 58045962 58045976 0.0E+00 AGCAATTGTAATGTT 15 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 58041758 58041769 0.0E+00 TCTATAAATAAC 12 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 58042056 58042071 3.0E-06 CAACCGCAAACCCCGC 16 EGR1_C2H2_full_monomeric_14_1 SELEX + 58042171 58042184 5.0E-06 CCCGCCCCCGCACC 14 Pax4_MA0068.1 JASPAR - 58045969 58045998 9.0E-06 AAGAATTTTTCAAGTCTCTATTAACATTAC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 58041815 58041828 1.0E-05 AAAAAAGGGAAGAA 14 RUNX3_RUNX_full_monomeric_10_1 SELEX + 58042056 58042065 4.0E-06 CAACCGCAAA 10 LEF1_HMG_DBD_monomeric_15_1 SELEX - 58045939 58045953 1.0E-06 AAGGATCAAAGCAAA 15 MEF2B_MADS_full_dimeric_12_1 SELEX + 58041758 58041769 1.0E-06 TCTATAAATAAC 12 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 58042170 58042185 8.0E-06 CCCCGCCCCCGCACCG 16 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 58042056 58042071 4.0E-06 CAACCGCAAACCCCGC 16 RUNX2_RUNX_DBD_dimeric_18_1 SELEX + 58042056 58042073 1.0E-06 CAACCGCAAACCCCGCAA 18 MEF2A_MA0052.1 JASPAR - 58041759 58041768 1.0E-06 TTATTTATAG 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 58041364 58041373 1.0E-06 CCAATAAAAT 10 SP1_MA0079.2 JASPAR + 58042170 58042179 7.0E-06 CCCCGCCCCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX + 58041824 58041835 7.0E-06 AAGAAAATTCAA 12 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 58041586 58041599 1.0E-06 GAATGACACAGAAC 14 BARHL2_homeodomain_full_monomeric_10_1 SELEX + 58041449 58041458 9.0E-06 AATAAATGAT 10 SP4_C2H2_full_monomeric_17_1 SELEX + 58042166 58042182 2.0E-06 CTAGCCCCGCCCCCGCA 17 SOX18_HMG_full_dimeric_15_1 SELEX + 58045962 58045976 2.0E-06 AGCAATTGTAATGTT 15 Egr3_C2H2_DBD_monomeric_15_1 SELEX + 58042171 58042185 8.0E-06 CCCGCCCCCGCACCG 15 SOX15_HMG_full_dimeric_15_1 SELEX - 58045962 58045976 6.0E-06 AACATTACAATTGCT 15 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 58045942 58045953 3.0E-06 AAGGATCAAAGC 12 SOX7_HMG_full_dimeric_16_1 SELEX + 58045956 58045971 3.0E-06 GACAATAGCAATTGTA 16 SOX7_HMG_full_dimeric_17_1 SELEX + 58045961 58045977 2.0E-06 TAGCAATTGTAATGTTA 17 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 58041364 58041373 1.0E-06 CCAATAAAAT 10 TBX20_TBX_full_dimeric_16_1 SELEX + 58041700 58041715 1.0E-06 GGGTGTTATTTCGTCA 16 IRF9_IRF_full_trimeric_15_1 SELEX - 58041646 58041660 3.0E-06 ACTGAAACCCAAACC 15 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 58041364 58041372 6.0E-06 CCAATAAAA 9 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 58041824 58041835 7.0E-06 AAGAAAATTCAA 12 Pou5f1_MA0142.1 JASPAR + 58045965 58045979 2.0E-06 AATTGTAATGTTAAT 15 SOX21_HMG_DBD_dimeric_16_1 SELEX + 58045956 58045971 6.0E-06 GACAATAGCAATTGTA 16 SOX21_HMG_DBD_dimeric_16_1 SELEX - 58045956 58045971 1.0E-06 TACAATTGCTATTGTC 16 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 58041364 58041373 1.0E-06 CCAATAAAAT 10 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 58041410 58041420 2.0E-06 TTTCCTCACAC 11 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 58042481 58042491 7.0E-06 TTTCCTCACAA 11 IRF4_IRF_full_dimeric_15_1 SELEX - 58041645 58041659 4.0E-06 CTGAAACCCAAACCG 15 Sox11_HMG_DBD_dimeric_15_1 SELEX + 58045962 58045976 6.0E-06 AGCAATTGTAATGTT 15 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 58045929 58045939 8.0E-06 ATCACTTAAAT 11 IRF5_IRF_full_dimeric_14_1 SELEX - 58041646 58041659 1.0E-06 CTGAAACCCAAACC 14 SPI1_ETS_full_monomeric_14_1 SELEX + 58041815 58041828 7.0E-06 AAAAAAGGGAAGAA 14 Sox3_HMG_DBD_dimeric_17_1 SELEX + 58045961 58045977 3.0E-06 TAGCAATTGTAATGTTA 17 RORA_1_MA0071.1 JASPAR - 58042433 58042442 4.0E-06 AACTAGGTCA 10 Sox2_MA0143.1 JASPAR + 58045964 58045978 6.0E-06 CAATTGTAATGTTAA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 58042298 58042310 8.0E-06 ACATAAATACATA 13 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 58045966 58045977 1.0E-05 TAACATTACAAT 12 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 58041364 58041373 1.0E-06 CCAATAAAAT 10 SOX9_HMG_full_dimeric_17_1 SELEX + 58045961 58045977 1.0E-06 TAGCAATTGTAATGTTA 17 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 58045929 58045939 8.0E-06 ATCACTTAAAT 11 RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 58042056 58042073 1.0E-06 CAACCGCAAACCCCGCAA 18 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 58045966 58045977 7.0E-06 TAACATTACAAT 12 V_HSF2_01_M00147 TRANSFAC + 58041581 58041590 1.0E-05 GGAATGTTCT 10 V_FREAC7_01_M00293 TRANSFAC + 58041756 58041771 0.0E+00 TTTCTATAAATAACAT 16 V_LEF1_04_M02774 TRANSFAC + 58045938 58045954 3.0E-06 ATTTGCTTTGATCCTTG 17 V_BCL6_Q3_01_M02085 TRANSFAC - 58041471 58041480 9.0E-06 GTTTCTAGGA 10 V_CDX2_Q5_01_M01659 TRANSFAC + 58041758 58041768 1.0E-06 TCTATAAATAA 11 V_EVI1_05_M00082 TRANSFAC + 58041799 58041809 1.0E-05 AGACAAGAAAG 11 V_SRY_07_M02813 TRANSFAC + 58045962 58045977 9.0E-06 AGCAATTGTAATGTTA 16 V_SMAD3_Q6_01_M01888 TRANSFAC - 58042440 58042452 0.0E+00 AGACAGACACAAC 13 V_TCF4_Q5_01_M02033 TRANSFAC - 58045940 58045949 3.0E-06 ATCAAAGCAA 10 V_POU5F1_02_M02245 TRANSFAC + 58045965 58045979 2.0E-06 AATTGTAATGTTAAT 15 V_SP1_Q6_01_M00931 TRANSFAC - 58042169 58042178 4.0E-06 GGGGCGGGGC 10 V_MEF2_02_M00231 TRANSFAC + 58041752 58041773 0.0E+00 GTCTTTTCTATAAATAACATAG 22 V_MEF2_02_M00231 TRANSFAC - 58041754 58041775 9.0E-06 TTCTATGTTATTTATAGAAAAG 22 V_ISL2_01_M01328 TRANSFAC - 58045928 58045943 6.0E-06 GCAAATCACTTAAATC 16 V_FOXO3A_Q1_M01137 TRANSFAC + 58041760 58041771 2.0E-06 TATAAATAACAT 12 V_POU3F2_02_M00464 TRANSFAC + 58045970 58045979 9.0E-06 TAATGTTAAT 10 V_SP1_03_M02281 TRANSFAC + 58042170 58042179 7.0E-06 CCCCGCCCCC 10 V_AREB6_04_M00415 TRANSFAC - 58041474 58041482 8.0E-06 CTGTTTCTA 9 V_AFP1_Q6_M00616 TRANSFAC + 58041761 58041771 6.0E-06 ATAAATAACAT 11 V_PU1_Q4_M01172 TRANSFAC - 58041816 58041834 1.0E-06 TGAATTTTCTTCCCTTTTT 19 V_HOXD13_01_M01404 TRANSFAC + 58041361 58041376 4.0E-06 CGCCCAATAAAATGCC 16 V_MEF2A_Q6_M02024 TRANSFAC - 58041758 58041767 1.0E-06 TATTTATAGA 10 V_TRF1_01_M01237 TRANSFAC + 58042388 58042402 1.0E-06 GGAGTGTTAGGGTTT 15 V_TCF3_04_M02816 TRANSFAC - 58045938 58045954 2.0E-06 CAAGGATCAAAGCAAAT 17 V_FOXA2_02_M02853 TRANSFAC + 58041761 58041775 2.0E-06 ATAAATAACATAGAA 15 V_ZFP105_03_M02827 TRANSFAC + 58041760 58041774 2.0E-06 TATAAATAACATAGA 15 V_HOXB13_01_M01467 TRANSFAC + 58041361 58041376 1.0E-06 CGCCCAATAAAATGCC 16 V_POLY_C_M00212 TRANSFAC + 58041365 58041382 3.0E-06 CAATAAAATGCCACCGTC 18 V_KROX_Q6_M00982 TRANSFAC + 58042171 58042184 0.0E+00 CCCGCCCCCGCACC 14 V_RSRFC4_Q2_M00407 TRANSFAC - 58041755 58041771 0.0E+00 ATGTTATTTATAGAAAA 17 V_RSRFC4_Q2_M00407 TRANSFAC + 58041756 58041772 0.0E+00 TTTCTATAAATAACATA 17 V_AMEF2_Q6_M00403 TRANSFAC + 58041755 58041772 9.0E-06 TTTTCTATAAATAACATA 18 V_SP1_Q6_M00196 TRANSFAC - 58042168 58042180 2.0E-06 CGGGGGCGGGGCT 13 V_IRF3_Q3_M01279 TRANSFAC + 58041538 58041550 7.0E-06 TGCTTTTCCCGTT 13 V_EGR1_Q6_M01873 TRANSFAC - 58042172 58042181 4.0E-06 GCGGGGGCGG 10 V_PAX2_01_M00098 TRANSFAC + 58042285 58042303 2.0E-06 CGTTGTTATGTGTTATGTA 19 V_BCL6_Q3_M01171 TRANSFAC - 58041471 58041480 1.0E-06 GTTTCTAGGA 10 V_MEF2_03_M00232 TRANSFAC + 58041752 58041773 0.0E+00 GTCTTTTCTATAAATAACATAG 22 V_MEF2_03_M00232 TRANSFAC - 58041754 58041775 1.0E-05 TTCTATGTTATTTATAGAAAAG 22 V_SP1SP3_Q4_M01219 TRANSFAC + 58041933 58041943 5.0E-06 CCGCCTCCTCC 11 V_EVI1_Q3_M02002 TRANSFAC - 58041800 58041808 6.0E-06 TTTCTTGTC 9 V_MEF2_04_M00233 TRANSFAC + 58041752 58041773 0.0E+00 GTCTTTTCTATAAATAACATAG 22 V_SPIB_01_M01204 TRANSFAC + 58041815 58041831 4.0E-06 AAAAAAGGGAAGAAAAT 17 V_TCF7_03_M02817 TRANSFAC - 58045938 58045954 1.0E-06 CAAGGATCAAAGCAAAT 17 V_XFD2_01_M00268 TRANSFAC + 58041758 58041771 9.0E-06 TCTATAAATAACAT 14 V_MEF2_Q6_01_M00941 TRANSFAC - 58041759 58041770 4.0E-06 TGTTATTTATAG 12 V_CDC5_01_M00478 TRANSFAC + 58041568 58041579 6.0E-06 GAGTTAACGTCA 12 V_TBP_06_M02814 TRANSFAC + 58041756 58041771 7.0E-06 TTTCTATAAATAACAT 16 V_OCT4_02_M01124 TRANSFAC + 58045966 58045980 2.0E-06 ATTGTAATGTTAATA 15 V_GATA4_Q3_M00632 TRANSFAC + 58041813 58041824 0.0E+00 AGAAAAAAGGGA 12 V_SP4_Q5_M01273 TRANSFAC + 58042169 58042179 1.0E-06 GCCCCGCCCCC 11 V_PTF1BETA_Q6_M00657 TRANSFAC - 58042474 58042487 2.0E-06 GAGGAAAGGTCAGC 14 V_HFH8_01_M00294 TRANSFAC + 58042299 58042311 8.0E-06 ATGTATTTATGTG 13 V_CREBP1CJUN_01_M00041 TRANSFAC - 58041572 58041579 1.0E-05 TGACGTTA 8 V_TBP_01_M00471 TRANSFAC + 58041760 58041767 4.0E-06 TATAAATA 8 V_FAC1_01_M00456 TRANSFAC - 58042291 58042304 0.0E+00 ATACATAACACATA 14 V_TAL1_01_M01591 TRANSFAC - 58041797 58041809 1.0E-05 CTTTCTTGTCTGT 13 V_OCT1_Q6_M00195 TRANSFAC - 58045935 58045949 8.0E-06 ATCAAAGCAAATCAC 15 V_GFI1B_01_M01058 TRANSFAC - 58045931 58045942 7.0E-06 CAAATCACTTAA 12 V_RSRFC4_01_M00026 TRANSFAC + 58041756 58041771 1.0E-06 TTTCTATAAATAACAT 16 V_RSRFC4_01_M00026 TRANSFAC - 58041756 58041771 0.0E+00 ATGTTATTTATAGAAA 16 V_EGR1_06_M02744 TRANSFAC + 58042171 58042184 1.0E-06 CCCGCCCCCGCACC 14 V_SOX2_01_M02246 TRANSFAC + 58045964 58045978 6.0E-06 CAATTGTAATGTTAA 15 V_NUR77_Q5_M01217 TRANSFAC + 58042475 58042484 7.0E-06 CTGACCTTTC 10 V_HFH3_01_M00289 TRANSFAC - 58041758 58041770 6.0E-06 TGTTATTTATAGA 13 V_FOXJ2_01_M00422 TRANSFAC + 58041755 58041772 2.0E-06 TTTTCTATAAATAACATA 18 V_SMAD3_Q6_M00701 TRANSFAC + 58042444 58042452 3.0E-06 TGTCTGTCT 9 V_RFX3_04_M02788 TRANSFAC - 58042279 58042301 3.0E-06 CATAACACATAACAACGACTTAT 23 V_MEF2_01_M00006 TRANSFAC + 58041757 58041772 1.0E-05 TTCTATAAATAACATA 16 V_SP1_Q2_01_M00933 TRANSFAC + 58042170 58042179 4.0E-06 CCCCGCCCCC 10 V_MEF2A_05_M01301 TRANSFAC - 58041759 58041770 2.0E-06 TGTTATTTATAG 12 V_UF1H3BETA_Q6_M01068 TRANSFAC - 58042169 58042182 5.0E-06 TGCGGGGGCGGGGC 14 V_HMEF2_Q6_M00406 TRANSFAC + 58041757 58041772 1.0E-06 TTCTATAAATAACATA 16 V_SP1_Q4_01_M00932 TRANSFAC - 58042168 58042180 2.0E-06 CGGGGGCGGGGCT 13 V_GLIS2_04_M02863 TRANSFAC + 58045971 58045984 6.0E-06 AATGTTAATAGAGA 14 V_PAX4_04_M00380 TRANSFAC + 58041815 58041844 9.0E-06 AAAAAAGGGAAGAAAATTCAACACAACTCT 30 V_PAX4_04_M00380 TRANSFAC - 58045969 58045998 9.0E-06 AAGAATTTTTCAAGTCTCTATTAACATTAC 30 V_RORA2_01_M00157 TRANSFAC - 58042432 58042444 8.0E-06 ACAACTAGGTCAG 13 V_AP2_Q3_M00800 TRANSFAC - 58042080 58042095 2.0E-06 GCCGCCGGGCTGAGAG 16 V_NANOG_02_M01247 TRANSFAC + 58041760 58041779 9.0E-06 TATAAATAACATAGAACCCT 20 V_OCT4_01_M01125 TRANSFAC + 58045965 58045979 0.0E+00 AATTGTAATGTTAAT 15 V_TCF11_01_M00285 TRANSFAC + 58041593 58041605 4.0E-06 GTCATTCTATTTC 13

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