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RLIM Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51132 ring finger protein, LIM domain interacting chrX - 73833961 - 73839461 73834461 Transcription Factor Binding Sites   Download all TFBS in the RLIM promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 73834865 73834876 2.0E-06 TATTTACACAGT 12 Pax5_MA0014.1 JASPAR - 73834213 73834232 9.0E-06 TGAGAAATGATGTAGAGCGA 20 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 73833515 73833532 5.0E-06 TGGATTAAACACAAATTA 18 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 73833516 73833532 2.0E-06 GGATTAAACACAAATTA 17 YY1_C2H2_full_monomeric_11_1 SELEX + 73834652 73834662 3.0E-06 TCCGCCATTTT 11 POU1F1_POU_DBD_monomeric_14_1 SELEX - 73833349 73833362 6.0E-06 CTTATGCTGATTAA 14 Pax4_MA0068.1 JASPAR + 73833226 73833255 7.0E-06 AAATGAAAAAAAAAATGACCTCAATAACAA 30 NR2F1_MA0017.1 JASPAR - 73834258 73834271 9.0E-06 TGACCCTAAAACCT 14 Klf4_MA0039.2 JASPAR - 73834640 73834649 1.0E-05 AGGGTGGGGC 10 POU3F3_POU_DBD_monomeric_13_1 SELEX - 73833350 73833362 6.0E-06 CTTATGCTGATTA 13 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 73833525 73833534 9.0E-06 ACAAATTAAC 10 SP1_MA0079.2 JASPAR - 73834557 73834566 9.0E-06 CCCCTCCTCC 10 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 73834530 73834546 4.0E-06 CCTTTTCGAGGAATCGA 17 Lhx3_MA0135.1 JASPAR + 73833346 73833358 6.0E-06 AAATTAATCAGCA 13 NFATC1_NFAT_full_dimeric_15_1 SELEX + 73834711 73834725 6.0E-06 TTCCCATTTTGAAAA 15 NFATC1_NFAT_full_dimeric_15_1 SELEX - 73834711 73834725 9.0E-06 TTTTCAAAATGGGAA 15 TFCP2_CP2_full_dimer-of-dimers_16_1 SELEX + 73833400 73833415 1.0E-06 ACCGGTTAATACTAGT 16 TFCP2_CP2_full_dimer-of-dimers_16_1 SELEX - 73833400 73833415 1.0E-06 ACTAGTATTAACCGGT 16 YY2_C2H2_full_monomeric_11_1 SELEX + 73834652 73834662 0.0E+00 TCCGCCATTTT 11 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 73834687 73834702 8.0E-06 TTCCCACAATTCTCAG 16 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 73833515 73833532 4.0E-06 TGGATTAAACACAAATTA 18 POU3F1_POU_DBD_monomeric_12_1 SELEX - 73833350 73833361 5.0E-06 TTATGCTGATTA 12 ERF_ETS_DBD_monomeric_10_1 SELEX + 73834465 73834474 9.0E-06 ACAGGAAGTG 10 MTF1_C2H2_DBD_monomeric_14_1 SELEX - 73833441 73833454 3.0E-06 TCTGCAGACGGTAC 14 ELF5_ETS_full_monomeric_11_1 SELEX + 73834464 73834474 6.0E-06 AACAGGAAGTG 11 IRF3_IRF_full_trimeric_21_1 SELEX + 73834595 73834615 1.0E-05 GCGGTTTGGAAAAGGAAAGCT 21 ETV6_ETS_full_dimeric_15_1 SELEX + 73833383 73833397 8.0E-06 CAGGAAGCAGAAGCC 15 POU3F2_POU_DBD_monomeric_12_1 SELEX - 73833350 73833361 4.0E-06 TTATGCTGATTA 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 73833515 73833532 5.0E-06 TGGATTAAACACAAATTA 18 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 73834864 73834874 7.0E-06 TGTGTAAATAC 11 IRF2_MA0051.1 JASPAR + 73834602 73834619 4.0E-06 GGAAAAGGAAAGCTGTTA 18 RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 73833672 73833689 7.0E-06 AAACCACATTTGCCTCAG 18 V_FOXP1_01_M00987 TRANSFAC - 73833233 73833252 6.0E-06 TTATTGAGGTCATTTTTTTT 20 V_SPI1_01_M01203 TRANSFAC - 73833822 73833838 5.0E-06 GGAAAAGGGAAGTAAAA 17 V_GAF_Q6_M01209 TRANSFAC + 73833269 73833279 5.0E-06 CAGATTCCCAG 11 V_MEQCJUN_02_M02048 TRANSFAC - 73833240 73833250 7.0E-06 ATTGAGGTCAT 11 V_FLI1_Q6_M01208 TRANSFAC + 73834466 73834476 0.0E+00 CAGGAAGTGAT 11 V_XFD1_01_M00267 TRANSFAC - 73834861 73834874 7.0E-06 TGTGTAAATACATG 14 V_YY1_02_M00069 TRANSFAC + 73834650 73834669 2.0E-06 CCTCCGCCATTTTGAATTGT 20 V_BCL6B_03_M02740 TRANSFAC - 73834530 73834545 4.0E-06 CTTTTCGAGGAATCGA 16 V_RORA1_01_M00156 TRANSFAC - 73833240 73833252 4.0E-06 TTATTGAGGTCAT 13 V_ETS_B_M00340 TRANSFAC + 73834012 73834025 2.0E-06 GAGAGGAAGTACTA 14 V_ETS_B_M00340 TRANSFAC + 73834444 73834457 3.0E-06 GACAGGAAACGACT 14 V_SPIB_02_M02041 TRANSFAC + 73834013 73834022 1.0E-06 AGAGGAAGTA 10 V_FOXJ2_02_M00423 TRANSFAC - 73834610 73834623 9.0E-06 GTCATAACAGCTTT 14 V_IRF2_Q6_M01882 TRANSFAC + 73834601 73834616 9.0E-06 TGGAAAAGGAAAGCTG 16 V_OTX_Q1_M01117 TRANSFAC - 73833347 73833354 5.0E-06 GATTAATT 8 V_GABPA_04_M02858 TRANSFAC + 73834030 73834045 2.0E-06 CCTCCTTCCCCTTCAA 16 V_SP1_03_M02281 TRANSFAC - 73834557 73834566 9.0E-06 CCCCTCCTCC 10 V_GKLF_02_M01588 TRANSFAC + 73834640 73834651 5.0E-06 GCCCCACCCTCC 12 V_AFP1_Q6_M00616 TRANSFAC + 73833248 73833258 7.0E-06 AATAACAAGAC 11 V_PU1_Q4_M01172 TRANSFAC + 73833819 73833837 0.0E+00 ATTTTTTACTTCCCTTTTC 19 V_PU1_Q4_M01172 TRANSFAC - 73834462 73834480 8.0E-06 CATCATCACTTCCTGTTGT 19 V_PAX3_B_M00327 TRANSFAC + 73834728 73834748 9.0E-06 GAAGGACGTCACGGTCTGACT 21 V_REX1_01_M01695 TRANSFAC + 73834410 73834419 1.0E-06 GCAGCCATTA 10 V_HNF1_C_M00206 TRANSFAC - 73833342 73833358 1.0E-05 TGCTGATTAATTTCAAG 17 V_ETS_Q4_M00771 TRANSFAC - 73834466 73834477 2.0E-06 CATCACTTCCTG 12 V_SPIC_01_M02042 TRANSFAC + 73834013 73834022 1.0E-06 AGAGGAAGTA 10 V_HMBOX1_01_M01456 TRANSFAC + 73833406 73833422 3.0E-06 TAATACTAGTTACTAAG 17 V_FREAC3_01_M00291 TRANSFAC - 73834861 73834876 6.0E-06 ACTGTGTAAATACATG 16 V_SPI1_03_M02078 TRANSFAC + 73834013 73834022 1.0E-06 AGAGGAAGTA 10 V_COUP_01_M00158 TRANSFAC - 73834258 73834271 9.0E-06 TGACCCTAAAACCT 14 V_RFX1_01_M00280 TRANSFAC - 73834429 73834445 1.0E-05 TCGCTGCTTGGTAACAA 17 V_IRX4_01_M01410 TRANSFAC - 73834854 73834870 0.0E+00 TAAATACATGTTGAATA 17 V_IRX4_01_M01410 TRANSFAC + 73834855 73834871 5.0E-06 ATTCAACATGTATTTAC 17 V_ARID3A_02_M02839 TRANSFAC - 73834775 73834789 6.0E-06 ACTAATATCACATTT 15 V_IRF3_Q3_M01279 TRANSFAC - 73833359 73833371 9.0E-06 CCTTTTTCCCTTA 13 V_MAZ_Q6_01_M02023 TRANSFAC + 73834554 73834567 3.0E-06 GGAGGAGGAGGGGG 14 V_HNF1_Q6_01_M01011 TRANSFAC + 73833518 73833538 1.0E-06 ATTAAACACAAATTAACTTGA 21 V_EGR1_04_M02848 TRANSFAC - 73834057 73834072 7.0E-06 AGTTGAGTGGTATAGT 16 V_YY1_Q6_02_M01035 TRANSFAC - 73834073 73834083 2.0E-06 GCTGCCATTTT 11 V_YY1_Q6_02_M01035 TRANSFAC + 73834652 73834662 0.0E+00 TCCGCCATTTT 11 V_REX1_03_M01744 TRANSFAC + 73834073 73834084 9.0E-06 AAAATGGCAGCG 12 V_REX1_03_M01744 TRANSFAC - 73834409 73834420 2.0E-06 ATAATGGCTGCC 12 V_REX1_03_M01744 TRANSFAC - 73834651 73834662 6.0E-06 AAAATGGCGGAG 12 V_SP1SP3_Q4_M01219 TRANSFAC - 73834557 73834567 1.0E-05 CCCCCTCCTCC 11 V_ZBRK1_01_M01105 TRANSFAC - 73833947 73833961 5.0E-06 GGGAGGCAGTTTTTG 15 V_SPIB_01_M01204 TRANSFAC - 73833822 73833838 8.0E-06 GGAAAAGGGAAGTAAAA 17 V_SPIB_01_M01204 TRANSFAC - 73834416 73834432 8.0E-06 ACAATGGGGAAGATAAT 17 V_TEL2_Q6_M00678 TRANSFAC - 73834466 73834475 4.0E-06 TCACTTCCTG 10 V_NKX3A_01_M00451 TRANSFAC + 73833291 73833302 9.0E-06 GAATAAGTATGG 12 V_CETS1P54_01_M00032 TRANSFAC + 73834465 73834474 9.0E-06 ACAGGAAGTG 10 V_IRX3_01_M01318 TRANSFAC - 73834854 73834870 0.0E+00 TAAATACATGTTGAATA 17 V_IRX3_01_M01318 TRANSFAC + 73834855 73834871 3.0E-06 ATTCAACATGTATTTAC 17 V_IRX5_01_M01472 TRANSFAC - 73834854 73834870 0.0E+00 TAAATACATGTTGAATA 17 V_IRX5_01_M01472 TRANSFAC + 73834855 73834871 4.0E-06 ATTCAACATGTATTTAC 17 V_IRF7_01_M00453 TRANSFAC + 73834600 73834617 3.0E-06 TTGGAAAAGGAAAGCTGT 18 V_IRF7_01_M00453 TRANSFAC - 73834699 73834716 2.0E-06 TGGGAAAGCGAAGGTTCC 18 V_ELF1_Q6_M00746 TRANSFAC + 73834462 73834473 5.0E-06 ACAACAGGAAGT 12 V_HBP1_04_M02866 TRANSFAC + 73834709 73834725 4.0E-06 CTTTCCCATTTTGAAAA 17 V_IRX3_02_M01485 TRANSFAC - 73834854 73834870 0.0E+00 TAAATACATGTTGAATA 17 V_IRX3_02_M01485 TRANSFAC + 73834855 73834871 5.0E-06 ATTCAACATGTATTTAC 17 V_YY1_03_M02044 TRANSFAC + 73834652 73834663 0.0E+00 TCCGCCATTTTG 12 V_ALPHACP1_01_M00687 TRANSFAC + 73834346 73834356 4.0E-06 CCTCCAATGAG 11 V_LBP9_01_M01592 TRANSFAC - 73833398 73833414 7.0E-06 CTAGTATTAACCGGTTG 17 V_GABPBETA_Q3_M01876 TRANSFAC + 73834013 73834023 1.0E-05 AGAGGAAGTAC 11 V_GABPBETA_Q3_M01876 TRANSFAC + 73834465 73834475 1.0E-06 ACAGGAAGTGA 11 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 73834642 73834650 8.0E-06 GAGGGTGGG 9 V_AIRE_01_M00999 TRANSFAC - 73834814 73834839 8.0E-06 TTTTGAACTGGTCTGCACGGATTGTG 26 V_RBPJK_01_M01112 TRANSFAC + 73834693 73834703 8.0E-06 ATTGTGGGAAC 11 V_FPM315_01_M01587 TRANSFAC + 73834551 73834562 6.0E-06 GCGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73834554 73834565 4.0E-06 GGAGGAGGAGGG 12 V_SPIC_02_M02077 TRANSFAC + 73834013 73834022 1.0E-06 AGAGGAAGTA 10 V_FOXA2_03_M02260 TRANSFAC + 73834865 73834876 2.0E-06 TATTTACACAGT 12 V_STAT6_02_M00500 TRANSFAC + 73833964 73833971 1.0E-05 GATTTCCT 8 V_ETS1_B_M00339 TRANSFAC + 73834013 73834027 6.0E-06 AGAGGAAGTACTACC 15 V_ETS1_B_M00339 TRANSFAC + 73834445 73834459 6.0E-06 ACAGGAAACGACTGC 15 V_ETS1_B_M00339 TRANSFAC + 73834465 73834479 1.0E-05 ACAGGAAGTGATGAT 15 V_IRX2_01_M01405 TRANSFAC - 73834854 73834870 0.0E+00 TAAATACATGTTGAATA 17 V_IRX2_01_M01405 TRANSFAC + 73834855 73834871 8.0E-06 ATTCAACATGTATTTAC 17 V_SRF_06_M02916 TRANSFAC - 73833470 73833486 2.0E-06 AAAAAAAAAAAAAGCCT 17 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 73833672 73833679 1.0E-05 TGTGGTTT 8 V_HNF1A_Q5_M02013 TRANSFAC - 73833525 73833535 7.0E-06 AGTTAATTTGT 11 V_SATB1_01_M01232 TRANSFAC - 73833729 73833740 9.0E-06 TATTACCAATTA 12 V_ELK1_03_M01163 TRANSFAC + 73834464 73834474 1.0E-05 AACAGGAAGTG 11 V_IRXB3_01_M01377 TRANSFAC - 73834854 73834870 0.0E+00 TAAATACATGTTGAATA 17 V_TCF3_05_M02920 TRANSFAC - 73833819 73833833 5.0E-06 AGGGAAGTAAAAAAT 15 V_PAX4_04_M00380 TRANSFAC + 73833232 73833261 2.0E-06 AAAAAAAAATGACCTCAATAACAAGACTGC 30 V_SPI1_02_M02043 TRANSFAC + 73834013 73834022 1.0E-06 AGAGGAAGTA 10 V_SPIB_03_M02076 TRANSFAC + 73834013 73834022 1.0E-06 AGAGGAAGTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.