Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GOLGA7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51125 golgin A7 chr8 + 41343080 - 41348672 41348172 Transcription Factor Binding Sites   Download all TFBS in the GOLGA7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZNF713_C2H2_full_monomeric_17_1 SELEX + 41348629 41348645 0.0E+00 AAGAAGAGAGCCACTAA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 41347640 41347656 8.0E-06 ATAAAGAAAAAACAACA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 41350892 41350908 6.0E-06 TAAAATAATACAAAACA 17 TBX5_TBX_DBD_dimeric_20_1 SELEX - 41347685 41347704 6.0E-06 ACGTGTGGGTTATGCCACCC 20 TBX20_TBX_DBD_dimeric_19_1 SELEX + 41350839 41350857 1.0E-06 TTGTGAGAACATCACACTT 19 TBX20_TBX_DBD_dimeric_19_1 SELEX - 41350839 41350857 2.0E-06 AAGTGTGATGTTCTCACAA 19 IRF7_IRF_DBD_trimeric_17_1 SELEX - 41350824 41350840 3.0E-06 AAAAGGAAAATCAGCTC 17 Pax4_MA0068.1 JASPAR - 41347621 41347650 2.0E-06 AAAAAACAACACCCCCTCCCCAAACCCTCA 30 Pax4_MA0068.1 JASPAR - 41347624 41347653 1.0E-05 AAGAAAAAACAACACCCCCTCCCCAAACCC 30 Pax4_MA0068.1 JASPAR - 41347630 41347659 1.0E-06 AACATAAAGAAAAAACAACACCCCCTCCCC 30 Pax4_MA0068.1 JASPAR - 41347632 41347661 0.0E+00 AAAACATAAAGAAAAAACAACACCCCCTCC 30 Pax4_MA0068.1 JASPAR - 41347633 41347662 1.0E-06 CAAAACATAAAGAAAAAACAACACCCCCTC 30 Pax4_MA0068.1 JASPAR - 41347638 41347667 3.0E-06 AAAAACAAAACATAAAGAAAAAACAACACC 30 Pax4_MA0068.1 JASPAR - 41347639 41347668 2.0E-06 AAAAAACAAAACATAAAGAAAAAACAACAC 30 Pax4_MA0068.1 JASPAR - 41347642 41347671 8.0E-06 AACAAAAAACAAAACATAAAGAAAAAACAA 30 Pax4_MA0068.1 JASPAR - 41350877 41350906 6.0E-06 AAATAATACAAAACACTTGCATATTAGTCA 30 Pax4_MA0068.1 JASPAR - 41350887 41350916 3.0E-06 AAATGCTTTAAAATAATACAAAACACTTGC 30 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 41348882 41348895 1.0E-06 TAAATCATCATCAT 14 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 41348885 41348898 1.0E-06 ATCATCATCATTCT 14 TBX1_TBX_DBD_dimeric_19_1 SELEX + 41350839 41350857 1.0E-06 TTGTGAGAACATCACACTT 19 TBX1_TBX_DBD_dimeric_19_1 SELEX - 41350839 41350857 5.0E-06 AAGTGTGATGTTCTCACAA 19 RFX2_RFX_DBD_dimeric_15_1 SELEX - 41347336 41347350 6.0E-06 CTTTGCAAGGCAGCC 15 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 41347643 41347656 1.0E-06 ATAAAGAAAAAACA 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 41347661 41347674 4.0E-06 CAAAACAAAAAACA 14 SP4_C2H2_full_monomeric_17_1 SELEX + 41347934 41347950 0.0E+00 CTGGCCCCGCCCACATC 17 TBX4_TBX_DBD_dimeric_20_1 SELEX + 41347685 41347704 8.0E-06 GGGTGGCATAACCCACACGT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 41347685 41347704 7.0E-06 ACGTGTGGGTTATGCCACCC 20 SP1_C2H2_DBD_monomeric_11_1 SELEX + 41347937 41347947 1.0E-05 GCCCCGCCCAC 11 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 41348434 41348448 3.0E-06 GGCACACGCTGCCAG 15 TBX20_TBX_full_dimeric_16_1 SELEX - 41350842 41350857 0.0E+00 AAGTGTGATGTTCTCA 16 TBX15_TBX_DBD_dimeric_19_1 SELEX + 41350839 41350857 3.0E-06 TTGTGAGAACATCACACTT 19 TBX15_TBX_DBD_dimeric_19_1 SELEX - 41350839 41350857 5.0E-06 AAGTGTGATGTTCTCACAA 19 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 41350865 41350879 4.0E-06 TAATAGAGAAAGTGA 15 CUX2_CUT_DBD_dimeric_18_1 SELEX + 41346791 41346808 8.0E-06 ATCAACAGATGAATGGAT 18 ID4_bHLH_DBD_dimeric_10_1 SELEX - 41348650 41348659 5.0E-06 AACACCTGTC 10 Myf_MA0055.1 JASPAR + 41348108 41348119 8.0E-06 CGACAGCAGCTG 12 Myf_MA0055.1 JASPAR + 41348111 41348122 4.0E-06 CAGCAGCTGGAG 12 VDR_nuclearreceptor_full_dimeric_16_1 SELEX + 41348948 41348963 2.0E-06 GGGTTTATTAGGTGCA 16 FOXB1_forkhead_full_monomeric_9_1 SELEX - 41349510 41349518 4.0E-06 TGTAAATAA 9 RREB1_MA0073.1 JASPAR - 41347658 41347677 1.0E-06 ACACAAAACAAAAAACAAAA 20 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 41347643 41347656 3.0E-06 ATAAAGAAAAAACA 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 41347661 41347674 1.0E-06 CAAAACAAAAAACA 14 V_FOXP1_01_M00987 TRANSFAC + 41347649 41347668 0.0E+00 TTCTTTATGTTTTGTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 41347653 41347672 2.0E-06 TTATGTTTTGTTTTTTGTTT 20 V_FOXP1_01_M00987 TRANSFAC + 41347656 41347675 4.0E-06 TGTTTTGTTTTTTGTTTTGT 20 V_FOXP1_01_M00987 TRANSFAC + 41347658 41347677 5.0E-06 TTTTGTTTTTTGTTTTGTGT 20 V_FOXP1_01_M00987 TRANSFAC + 41347660 41347679 1.0E-06 TTGTTTTTTGTTTTGTGTAT 20 RXR_RAR_DR5_MA0159.1 JASPAR - 41347399 41347415 9.0E-06 AGGTGACCAAGGGGACA 17 V_AP1_Q2_M00173 TRANSFAC + 41350875 41350885 4.0E-06 AGTGACTAATA 11 V_TCF3_01_M01594 TRANSFAC + 41347664 41347676 7.0E-06 TTTTTGTTTTGTG 13 V_MYOD_Q6_M00184 TRANSFAC - 41348650 41348659 3.0E-06 AACACCTGTC 10 V_POU3F3_01_M03090 TRANSFAC - 41350879 41350895 7.0E-06 AACACTTGCATATTAGT 17 V_ZFP410_04_M02936 TRANSFAC + 41347799 41347815 5.0E-06 AAACTCCGCCCCTCACA 17 V_ZFX_01_M01593 TRANSFAC - 41348171 41348186 6.0E-06 GCCCAGGCCCCGCGCC 16 V_BCL6_01_M01183 TRANSFAC + 41347651 41347666 2.0E-06 CTTTATGTTTTGTTTT 16 V_BCL6_01_M01183 TRANSFAC + 41350892 41350907 1.0E-06 TGTTTTGTATTATTTT 16 V_BCL6_01_M01183 TRANSFAC + 41350904 41350919 5.0E-06 TTTTAAAGCATTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 41350908 41350923 0.0E+00 TTTTAAAAAATGCTTT 16 V_SATB1_Q3_M01723 TRANSFAC - 41347645 41347660 3.0E-06 AAACATAAAGAAAAAA 16 V_EGR_Q6_M00807 TRANSFAC + 41348269 41348279 2.0E-06 GTGGGGGCGAG 11 V_OCTAMER_01_M01324 TRANSFAC - 41350879 41350895 7.0E-06 AACACTTGCATATTAGT 17 V_ZFP740_03_M02834 TRANSFAC - 41347441 41347456 1.0E-06 TCTCACCCCCCATTTC 16 V_SRY_02_M00160 TRANSFAC - 41347656 41347667 5.0E-06 AAAAACAAAACA 12 V_SRY_02_M00160 TRANSFAC - 41347663 41347674 3.0E-06 CAAAACAAAAAA 12 V_NFAT3_Q3_M01734 TRANSFAC + 41350828 41350837 3.0E-06 TGATTTTCCT 10 V_OCT1_01_M00135 TRANSFAC + 41350879 41350897 4.0E-06 ACTAATATGCAAGTGTTTT 19 V_FOXO3A_Q1_M01137 TRANSFAC - 41349507 41349518 3.0E-06 TGTAAATAACTG 12 V_HNF3_Q6_01_M01012 TRANSFAC + 41347651 41347668 8.0E-06 CTTTATGTTTTGTTTTTT 18 V_NERF_Q2_M00531 TRANSFAC + 41348077 41348094 6.0E-06 CGGCAGGACGTAAGTGAC 18 V_AFP1_Q6_M00616 TRANSFAC - 41347639 41347649 6.0E-06 AAAAACAACAC 11 V_AP4_Q6_02_M01860 TRANSFAC - 41348108 41348120 6.0E-06 CCAGCTGCTGTCG 13 V_HNF4A_04_M02764 TRANSFAC - 41347729 41347745 5.0E-06 TGTGAGGGGTCATTTTC 17 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 41349428 41349443 0.0E+00 CATTCCTTGGGTGTGG 16 V_HOXD13_01_M01404 TRANSFAC - 41350797 41350812 9.0E-06 CAATCAGTAAAATTTC 16 V_SOX21_03_M02803 TRANSFAC + 41350896 41350911 3.0E-06 TTGTATTATTTTAAAG 16 V_TCFAP2E_04_M02926 TRANSFAC - 41347646 41347659 3.0E-06 AACATAAAGAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 41347665 41347678 6.0E-06 TACACAAAACAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC - 41350917 41350926 1.0E-06 TATTTTTAAA 10 V_CDP_04_M01344 TRANSFAC - 41348883 41348897 4.0E-06 GAATGATGATGATTT 15 V_STAT4_Q4_M01666 TRANSFAC - 41350896 41350909 1.0E-06 TTAAAATAATACAA 14 V_ELF4_04_M02850 TRANSFAC - 41350896 41350912 4.0E-06 GCTTTAAAATAATACAA 17 V_ELF4_04_M02850 TRANSFAC + 41350915 41350931 8.0E-06 TTTTTAAAAATACACAC 17 V_TAL1_Q6_M00993 TRANSFAC - 41348112 41348121 3.0E-06 TCCAGCTGCT 10 V_GC_01_M00255 TRANSFAC - 41347799 41347812 4.0E-06 GAGGGGCGGAGTTT 14 V_SOX7_03_M02807 TRANSFAC - 41347650 41347671 4.0E-06 AACAAAAAACAAAACATAAAGA 22 V_HELIOSA_02_M01004 TRANSFAC - 41350830 41350840 1.0E-06 AAAAGGAAAAT 11 V_FOXA2_02_M02853 TRANSFAC - 41347656 41347670 6.0E-06 ACAAAAAACAAAACA 15 V_MYF_01_M01302 TRANSFAC + 41348108 41348119 8.0E-06 CGACAGCAGCTG 12 V_MYF_01_M01302 TRANSFAC + 41348111 41348122 4.0E-06 CAGCAGCTGGAG 12 V_OCT1_02_M00136 TRANSFAC + 41350879 41350893 7.0E-06 ACTAATATGCAAGTG 15 V_ZFP105_03_M02827 TRANSFAC - 41347657 41347671 0.0E+00 AACAAAAAACAAAAC 15 V_ZFP105_03_M02827 TRANSFAC - 41347661 41347675 7.0E-06 ACAAAACAAAAAACA 15 V_HOXB13_01_M01467 TRANSFAC - 41350797 41350812 8.0E-06 CAATCAGTAAAATTTC 16 V_TEF_Q6_M00672 TRANSFAC - 41350839 41350850 6.0E-06 ATGTTCTCACAA 12 V_NFAT_Q6_M00302 TRANSFAC - 41350829 41350840 4.0E-06 AAAAGGAAAATC 12 V_XFD3_01_M00269 TRANSFAC - 41349507 41349520 6.0E-06 ACTGTAAATAACTG 14 V_KROX_Q6_M00982 TRANSFAC - 41348266 41348279 9.0E-06 CTCGCCCCCACCCG 14 V_AP1_Q4_M00188 TRANSFAC + 41350875 41350885 3.0E-06 AGTGACTAATA 11 V_SP1_Q6_M00196 TRANSFAC - 41347936 41347948 5.0E-06 TGTGGGCGGGGCC 13 V_FOXK1_04_M02856 TRANSFAC - 41347637 41347651 7.0E-06 GAAAAAACAACACCC 15 V_FOXK1_04_M02856 TRANSFAC - 41347655 41347669 7.0E-06 CAAAAAACAAAACAT 15 V_SOX18_03_M02801 TRANSFAC + 41350896 41350911 3.0E-06 TTGTATTATTTTAAAG 16 V_HIC1_05_M02763 TRANSFAC - 41347681 41347696 1.0E-06 GTTATGCCACCCAACT 16 V_GLIS2_03_M02759 TRANSFAC + 41347731 41347746 3.0E-06 AAATGACCCCTCACAA 16 V_CUX1_04_M02959 TRANSFAC - 41348883 41348897 4.0E-06 GAATGATGATGATTT 15 V_NFE4_Q5_M02105 TRANSFAC - 41348011 41348022 5.0E-06 CACCCTCTCCTC 12 V_OCT1_04_M00138 TRANSFAC - 41350897 41350919 1.0E-05 AAAAAATGCTTTAAAATAATACA 23 V_SOX12_04_M02900 TRANSFAC - 41347647 41347662 3.0E-06 CAAAACATAAAGAAAA 16 V_KLF7_03_M02773 TRANSFAC + 41347934 41347949 5.0E-06 CTGGCCCCGCCCACAT 16 V_CDC5_01_M00478 TRANSFAC - 41350901 41350912 3.0E-06 GCTTTAAAATAA 12 V_TBP_06_M02814 TRANSFAC + 41350911 41350926 1.0E-06 GCATTTTTTAAAAATA 16 V_TBP_06_M02814 TRANSFAC + 41350913 41350928 6.0E-06 ATTTTTTAAAAATACA 16 V_SOX11_03_M02795 TRANSFAC - 41347653 41347669 5.0E-06 CAAAAAACAAAACATAA 17 V_SOX11_03_M02795 TRANSFAC - 41347660 41347676 3.0E-06 CACAAAACAAAAAACAA 17 V_BLIMP1_Q6_M01066 TRANSFAC - 41347948 41347963 1.0E-06 GAGGAAGGGAAATGAT 16 V_FOXO1_Q5_M01216 TRANSFAC - 41347641 41347649 5.0E-06 AAAAACAAC 9 V_FOXO1_Q5_M01216 TRANSFAC - 41347659 41347667 1.0E-06 AAAAACAAA 9 V_FOXO1_Q5_M01216 TRANSFAC - 41347666 41347674 8.0E-06 CAAAACAAA 9 V_KAISO_01_M01119 TRANSFAC - 41347302 41347311 4.0E-06 CTCCTGCTAA 10 V_TFIII_Q6_M00706 TRANSFAC - 41348863 41348871 1.0E-05 AGAGGTAGG 9 V_BCL6B_04_M02844 TRANSFAC + 41347800 41347815 3.0E-06 AACTCCGCCCCTCACA 16 V_BCL6B_04_M02844 TRANSFAC - 41348050 41348065 6.0E-06 TTCCCCGCCCCTCAGC 16 V_SP4_Q5_M01273 TRANSFAC + 41347937 41347947 9.0E-06 GCCCCGCCCAC 11 V_AML2_Q3_01_M01854 TRANSFAC + 41347944 41347954 9.0E-06 CCACATCATTT 11 V_MYOD_01_M00001 TRANSFAC + 41348649 41348660 5.0E-06 AGACAGGTGTTT 12 V_MTF1_06_M02882 TRANSFAC - 41347641 41347654 9.0E-06 AAAGAAAAAACAAC 14 V_MTF1_06_M02882 TRANSFAC - 41350893 41350906 5.0E-06 AAATAATACAAAAC 14 V_MTF1_06_M02882 TRANSFAC + 41350913 41350926 6.0E-06 ATTTTTTAAAAATA 14 V_FAC1_01_M00456 TRANSFAC - 41347652 41347665 0.0E+00 AAACAAAACATAAA 14 V_FAC1_01_M00456 TRANSFAC - 41347654 41347667 1.0E-06 AAAAACAAAACATA 14 V_FAC1_01_M00456 TRANSFAC - 41347659 41347672 0.0E+00 AAACAAAAAACAAA 14 V_FAC1_01_M00456 TRANSFAC - 41347664 41347677 0.0E+00 ACACAAAACAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 41347666 41347679 1.0E-06 ATACACAAAACAAA 14 V_IPF1_05_M01255 TRANSFAC - 41350800 41350811 5.0E-06 AATCAGTAAAAT 12 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 41348016 41348024 8.0E-06 GAGGGTGGG 9 V_AP1FJ_Q2_M00172 TRANSFAC + 41350875 41350885 9.0E-06 AGTGACTAATA 11 V_FOXL1_02_M02857 TRANSFAC - 41347651 41347666 1.0E-06 AAAACAAAACATAAAG 16 V_FOXL1_02_M02857 TRANSFAC - 41347656 41347671 7.0E-06 AACAAAAAACAAAACA 16 V_FOXL1_02_M02857 TRANSFAC - 41347663 41347678 1.0E-06 TACACAAAACAAAAAA 16 V_FOXL1_02_M02857 TRANSFAC - 41350892 41350907 2.0E-06 AAAATAATACAAAACA 16 V_FOXJ3_06_M02855 TRANSFAC - 41347651 41347667 0.0E+00 AAAAACAAAACATAAAG 17 V_FOXJ3_06_M02855 TRANSFAC - 41347663 41347679 6.0E-06 ATACACAAAACAAAAAA 17 V_ESRRA_04_M02852 TRANSFAC - 41347729 41347745 5.0E-06 TGTGAGGGGTCATTTTC 17 V_TCF7_04_M02921 TRANSFAC + 41350913 41350927 3.0E-06 ATTTTTTAAAAATAC 15 V_PLZF_02_M01075 TRANSFAC + 41350895 41350923 9.0E-06 TTTGTATTATTTTAAAGCATTTTTTAAAA 29 V_RXR_RAR_01_M02272 TRANSFAC - 41347399 41347415 9.0E-06 AGGTGACCAAGGGGACA 17 V_SOX8_03_M02808 TRANSFAC + 41350894 41350910 1.0E-06 TTTTGTATTATTTTAAA 17 V_MYF6_03_M02781 TRANSFAC + 41348646 41348661 2.0E-06 GCAAGACAGGTGTTTG 16 V_SRF_06_M02916 TRANSFAC - 41347640 41347656 5.0E-06 ATAAAGAAAAAACAACA 17 V_SRF_06_M02916 TRANSFAC - 41347641 41347657 5.0E-06 CATAAAGAAAAAACAAC 17 V_SRF_06_M02916 TRANSFAC - 41347642 41347658 4.0E-06 ACATAAAGAAAAAACAA 17 V_SRF_06_M02916 TRANSFAC - 41347653 41347669 3.0E-06 CAAAAAACAAAACATAA 17 V_SRF_06_M02916 TRANSFAC - 41347659 41347675 9.0E-06 ACAAAACAAAAAACAAA 17 V_SRF_06_M02916 TRANSFAC - 41350895 41350911 9.0E-06 CTTTAAAATAATACAAA 17 V_EKLF_Q5_M01874 TRANSFAC - 41349471 41349480 9.0E-06 CCACACCCAC 10 V_FOXO1_01_M00473 TRANSFAC - 41347659 41347668 2.0E-06 AAAAAACAAA 10 V_RFX3_04_M02788 TRANSFAC + 41350848 41350870 3.0E-06 CATCACACTTGGCAACATAATAG 23 V_SP1_Q2_01_M00933 TRANSFAC - 41348054 41348063 7.0E-06 CCCCGCCCCT 10 V_FOXO4_01_M00472 TRANSFAC - 41347657 41347667 1.0E-05 AAAAACAAAAC 11 V_HMEF2_Q6_M00406 TRANSFAC + 41350916 41350931 4.0E-06 TTTTAAAAATACACAC 16 V_ZFP128_04_M02932 TRANSFAC - 41350917 41350930 6.0E-06 TGTGTATTTTTAAA 14 V_SP1_Q4_01_M00932 TRANSFAC - 41347936 41347948 4.0E-06 TGTGGGCGGGGCC 13 V_HOXD10_01_M01375 TRANSFAC - 41350899 41350915 6.0E-06 AATGCTTTAAAATAATA 17 V_GLIS2_04_M02863 TRANSFAC - 41350892 41350905 1.0E-05 AATAATACAAAACA 14 V_GLIS2_04_M02863 TRANSFAC + 41350897 41350910 7.0E-06 TGTATTATTTTAAA 14 V_GLIS2_04_M02863 TRANSFAC - 41350915 41350928 2.0E-06 TGTATTTTTAAAAA 14 V_PAX4_04_M00380 TRANSFAC - 41347625 41347654 1.0E-05 AAAGAAAAAACAACACCCCCTCCCCAAACC 30 V_PAX4_04_M00380 TRANSFAC - 41347631 41347660 1.0E-06 AAACATAAAGAAAAAACAACACCCCCTCCC 30 V_PAX4_04_M00380 TRANSFAC - 41347632 41347661 3.0E-06 AAAACATAAAGAAAAAACAACACCCCCTCC 30 V_PAX4_04_M00380 TRANSFAC - 41347636 41347665 1.0E-06 AAACAAAACATAAAGAAAAAACAACACCCC 30 V_PAX4_04_M00380 TRANSFAC - 41347638 41347667 1.0E-06 AAAAACAAAACATAAAGAAAAAACAACACC 30 V_PAX4_04_M00380 TRANSFAC - 41347639 41347668 6.0E-06 AAAAAACAAAACATAAAGAAAAAACAACAC 30 V_PAX4_04_M00380 TRANSFAC - 41350890 41350919 1.0E-06 AAAAAATGCTTTAAAATAATACAAAACACT 30 V_SMAD1_01_M01590 TRANSFAC - 41347656 41347667 3.0E-06 AAAAACAAAACA 12 V_SMAD1_01_M01590 TRANSFAC - 41347663 41347674 1.0E-06 CAAAACAAAAAA 12 V_PAX2_02_M00486 TRANSFAC - 41348948 41348956 8.0E-06 AATAAACCC 9 V_NANOG_02_M01247 TRANSFAC - 41347652 41347671 4.0E-06 AACAAAAAACAAAACATAAA 20 V_NANOG_02_M01247 TRANSFAC - 41347659 41347678 1.0E-06 TACACAAAACAAAAAACAAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.