Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GOLT1B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 51026 golgi transport 1B chr12 + 21649698 - 21655198 21654698 Transcription Factor Binding Sites   Download all TFBS in the GOLT1B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 21658599 21658615 1.0E-06 TACTTAAAAAACTCTTA 17 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 21655327 21655337 1.0E-06 TTTAAATGTCA 11 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 21654346 21654358 7.0E-06 GAAGGGTCAAGGG 13 Zfp423_MA0116.1 JASPAR - 21655019 21655033 7.0E-06 AGCCCCTTAGGGTCC 15 EWSR1-FLI1_MA0149.1 JASPAR - 21654778 21654795 5.0E-06 GGGAGAAATGAAGCCGGG 18 NFYA_MA0060.1 JASPAR + 21654587 21654602 2.0E-06 TTCAGCCAATCACAGA 16 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 21654876 21654890 1.0E-05 GTGCTTACTCTGCGT 15 GBX2_homeodomain_full_monomeric_10_1 SELEX - 21654614 21654623 8.0E-06 ACCAATTAGA 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 21654112 21654121 6.0E-06 AGCAGCTGCC 10 MAFK_bZIP_full_dimeric_15_1 SELEX - 21654876 21654890 3.0E-06 GTGCTTACTCTGCGT 15 Lhx3_MA0135.1 JASPAR + 21654234 21654246 9.0E-06 TGATTAACTTTCC 13 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 21654120 21654129 8.0E-06 CTAATAAACA 10 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 21654623 21654637 8.0E-06 GACCACACCCCTTGA 15 ELK1_MA0028.1 JASPAR - 21654242 21654251 1.0E-06 AAACCGGAAA 10 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 21655213 21655227 9.0E-06 CACAAGAGAAAGTTT 15 LBX2_homeodomain_DBD_monomeric_10_1 SELEX - 21654614 21654623 3.0E-06 ACCAATTAGA 10 REST_MA0138.2 JASPAR - 21654813 21654833 9.0E-06 GACAGCACCTCGGAAAGCCCA 21 Nobox_MA0125.1 JASPAR + 21654616 21654623 7.0E-06 TAATTGGT 8 V_APOLYA_B_M00310 TRANSFAC + 21654122 21654136 4.0E-06 AATAAACAGGCTTTG 15 V_FLI1_Q6_M01208 TRANSFAC + 21654275 21654285 5.0E-06 AAGGAAGTGAT 11 V_LMAF_Q2_M01139 TRANSFAC + 21654183 21654191 6.0E-06 GGTCAGCAG 9 V_IK_Q5_M01169 TRANSFAC + 21655312 21655321 3.0E-06 TTTGGGAGGC 10 V_NR2F2_03_M02783 TRANSFAC - 21654346 21654361 8.0E-06 TTTGAAGGGTCAAGGG 16 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 21658599 21658612 5.0E-06 TAAGAGTTTTTTAA 14 V_NKX24_01_M01350 TRANSFAC - 21658605 21658620 6.0E-06 ACAGCTACTTAAAAAA 16 V_HNF4A_04_M02764 TRANSFAC + 21654951 21654967 1.0E-05 CCGCCGGGGTCAATGAA 17 V_LYF1_01_M00141 TRANSFAC + 21655312 21655320 9.0E-06 TTTGGGAGG 9 V_NFY_Q6_01_M00775 TRANSFAC + 21654586 21654598 3.0E-06 GTTCAGCCAATCA 13 V_NFY_Q6_01_M00775 TRANSFAC - 21654668 21654680 7.0E-06 TCTCAACCAATAA 13 V_MEF2A_Q6_M02024 TRANSFAC + 21655324 21655333 7.0E-06 TATTTTAAAT 10 V_MEF2A_Q6_M02024 TRANSFAC - 21658706 21658715 0.0E+00 TATTTTTAGA 10 V_AR_03_M00956 TRANSFAC + 21655182 21655208 3.0E-06 GTGAGATGGGCGCTTTGTTCTAGGGGC 27 V_NFY_C_M00209 TRANSFAC - 21654587 21654600 2.0E-06 TGTGATTGGCTGAA 14 V_BACH1_01_M00495 TRANSFAC - 21658727 21658741 8.0E-06 CAGATGAGTCAGAGT 15 V_ZNF219_01_M01122 TRANSFAC - 21654977 21654988 9.0E-06 CGCCCCCAACCC 12 V_PR_01_M00954 TRANSFAC + 21655182 21655208 7.0E-06 GTGAGATGGGCGCTTTGTTCTAGGGGC 27 V_NKX31_02_M02782 TRANSFAC - 21658605 21658621 5.0E-06 CACAGCTACTTAAAAAA 17 V_SZF11_01_M01109 TRANSFAC + 21653929 21653943 5.0E-06 ACAGGGTGACAGCCA 15 V_ASCL2_03_M02737 TRANSFAC - 21654108 21654124 0.0E+00 ATTAGCAGCTGCCATTT 17 V_ASCL2_03_M02737 TRANSFAC + 21654109 21654125 5.0E-06 AATGGCAGCTGCTAATA 17 V_GR_01_M00955 TRANSFAC + 21655182 21655208 5.0E-06 GTGAGATGGGCGCTTTGTTCTAGGGGC 27 V_HBP1_03_M02762 TRANSFAC + 21654956 21654971 6.0E-06 GGGGTCAATGAATGAA 16 V_ERR1_Q3_M01841 TRANSFAC - 21655326 21655340 8.0E-06 AGGTGACATTTAAAA 15 V_AP1_C_M00199 TRANSFAC - 21658730 21658738 3.0E-06 ATGAGTCAG 9 V_KLF7_03_M02773 TRANSFAC - 21654624 21654639 6.0E-06 GTGACCACACCCCTTG 16 V_XFD2_01_M00268 TRANSFAC + 21654120 21654133 9.0E-06 CTAATAAACAGGCT 14 V_OCT4_02_M01124 TRANSFAC + 21658698 21658712 8.0E-06 ATTGTGCTTCTAAAA 15 V_NKX32_02_M01482 TRANSFAC - 21658605 21658621 7.0E-06 CACAGCTACTTAAAAAA 17 V_CAAT_01_M00254 TRANSFAC + 21654587 21654598 1.0E-06 TTCAGCCAATCA 12 V_ISX_01_M01331 TRANSFAC + 21654611 21654626 9.0E-06 TTCTCTAATTGGTCAA 16 V_NFYC_Q5_M02107 TRANSFAC + 21654589 21654602 2.0E-06 CAGCCAATCACAGA 14 V_MSX2_01_M01393 TRANSFAC - 21654611 21654627 4.0E-06 CTTGACCAATTAGAGAA 17 V_PXR_Q2_M00964 TRANSFAC + 21654956 21654967 3.0E-06 GGGGTCAATGAA 12 V_NFY_01_M00287 TRANSFAC + 21654587 21654602 2.0E-06 TTCAGCCAATCACAGA 16 V_NRSF_01_M00256 TRANSFAC - 21654813 21654833 4.0E-06 GACAGCACCTCGGAAAGCCCA 21 V_IRF6_04_M02874 TRANSFAC + 21655243 21655257 9.0E-06 CCCACTCTCGGGATC 15 V_REST_02_M02256 TRANSFAC - 21654813 21654833 9.0E-06 GACAGCACCTCGGAAAGCCCA 21 V_EWSR1FLI1_01_M02252 TRANSFAC - 21654778 21654795 5.0E-06 GGGAGAAATGAAGCCGGG 18 V_PR_02_M00957 TRANSFAC + 21655182 21655208 1.0E-06 GTGAGATGGGCGCTTTGTTCTAGGGGC 27 V_NFYA_Q5_M02106 TRANSFAC + 21654589 21654602 0.0E+00 CAGCCAATCACAGA 14 V_RNF96_01_M01199 TRANSFAC + 21655235 21655244 7.0E-06 GCCCGCGGCC 10 V_GLIS2_04_M02863 TRANSFAC + 21658590 21658603 9.0E-06 TATATGACTTAAGA 14 V_GBX1_01_M01371 TRANSFAC - 21654611 21654627 9.0E-06 CTTGACCAATTAGAGAA 17 V_ER_Q6_M00191 TRANSFAC + 21658609 21658627 1.0E-06 TTAAGTAGCTGTGACCTAG 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.