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SHANK1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
50944 SH3 and multiple ankyrin repeat domains 1 chr19 -51219695 - 51225195 51220195

Transcription Factor Binding Sites

 
Download all TFBS in the SHANK1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NFE2_bZIP_DBD_dimeric_11_1 SELEX + 51224991 51225001 1.0E-06 CATGACTCATG 11
NFE2_bZIP_DBD_dimeric_11_1 SELEX - 51224991 51225001 2.0E-06 CATGAGTCATG 11
CTCF_MA0139.1 JASPAR + 51224370 51224388 7.0E-06 GGGCCTGCAGGGGGCAGTT 19
SPIC_ETS_full_monomeric_14_1 SELEX - 51224334 51224347 7.0E-06 AGAATGAGGAAGCC 14
RFX4_RFX_DBD_dimeric_16_1 SELEX + 51221323 51221338 9.0E-06 CGTTGCCATGGAGATG 16
RFX4_RFX_DBD_dimeric_16_1 SELEX - 51221323 51221338 1.0E-06 CATCTCCATGGCAACG 16
ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 51224975 51224986 8.0E-06 GCTTTTCCCGCC 12
EWSR1-FLI1_MA0149.1 JASPAR - 51223087 51223104 5.0E-06 GGAGGGGAGGGAGGGAGA 18
EWSR1-FLI1_MA0149.1 JASPAR - 51223091 51223108 1.0E-06 GGAGGGAGGGGAGGGAGG 18
RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 51220539 51220557 6.0E-06 AAAGTGGGCCAGTAGCTCC 19
RUNX3_RUNX_full_monomeric_10_1 SELEX + 51220520 51220529 9.0E-06 AAACCGCAGA 10
MEF2B_MADS_full_dimeric_12_1 SELEX + 51221829 51221840 4.0E-06 GCTAAGAATAGC 12
Rfx3_RFX_DBD_dimeric_16_1 SELEX + 51221323 51221338 2.0E-06 CGTTGCCATGGAGATG 16
FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 51224601 51224612 1.0E-06 TTTCCCCACATA 12
RFX2_RFX_DBD_dimeric_16_1 SELEX + 51221323 51221338 2.0E-06 CGTTGCCATGGAGATG 16
RFX2_RFX_DBD_dimeric_16_1 SELEX - 51221323 51221338 3.0E-06 CATCTCCATGGCAACG 16
RFX5_RFX_DBD_dimeric_16_3 SELEX - 51221323 51221338 4.0E-06 CATCTCCATGGCAACG 16
JDP2_bZIP_full_dimeric_9_1 SELEX + 51224992 51225000 2.0E-06 ATGACTCAT 9
JDP2_bZIP_full_dimeric_9_1 SELEX - 51224992 51225000 4.0E-06 ATGAGTCAT 9
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 51224601 51224611 2.0E-06 TTTCCCCACAT 11
FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 51224601 51224614 6.0E-06 TTTCCCCACATACG 14
FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 51224601 51224612 1.0E-06 TTTCCCCACATA 12
POU3F3_POU_DBD_dimeric_12_1 SELEX - 51224156 51224167 7.0E-06 ATGAATAAGGAT 12
Zfx_MA0146.1 JASPAR - 51224967 51224980 1.0E-06 CCCGCCCAGGCCTG 14
V_FOXP3_Q4_M00992 TRANSFAC - 51221808 51221824 5.0E-06 GAGCGTTTGATTCATGC 17
V_BACH2_01_M00490 TRANSFAC - 51224991 51225001 1.0E-06 CATGAGTCATG 11
V_BTEB3_Q5_M01865 TRANSFAC + 51221396 51221408 9.0E-06 GAAAGGGAAGACT 13
V_MYB_03_M02883 TRANSFAC + 51220605 51220620 9.0E-06 GGACAAACTGACAGGC 16
V_RFX4_03_M02789 TRANSFAC - 51221321 51221335 1.0E-06 CTCCATGGCAACGGT 15
V_AP2_Q6_01_M00915 TRANSFAC - 51224466 51224478 1.0E-05 GCCTCCCCAGGCT 13
V_AP4_Q6_02_M01860 TRANSFAC + 51224234 51224246 1.0E-06 CCAGCTGCAGGCA 13
V_AP4_Q6_02_M01860 TRANSFAC + 51224412 51224424 3.0E-06 CCAGCTGCAGGCT 13
V_BACH1_01_M00495 TRANSFAC - 51224989 51225003 1.0E-06 CCCATGAGTCATGCA 15
V_AP1_Q6_01_M00925 TRANSFAC + 51224992 51225000 4.0E-06 ATGACTCAT 9
V_MAZ_Q6_01_M02023 TRANSFAC - 51223089 51223102 4.0E-06 AGGGGAGGGAGGGA 14
V_MAZ_Q6_01_M02023 TRANSFAC - 51223094 51223107 0.0E+00 GAGGGAGGGGAGGG 14
V_MAZ_Q6_01_M02023 TRANSFAC - 51223098 51223111 2.0E-06 GGCGGAGGGAGGGG 14
V_MAZ_Q6_01_M02023 TRANSFAC - 51223112 51223125 6.0E-06 GAGGGAGGGGAGAG 14
V_RFXDC2_03_M02790 TRANSFAC - 51221321 51221335 8.0E-06 CTCCATGGCAACGGT 15
V_CMYB_01_M00004 TRANSFAC - 51224180 51224197 9.0E-06 TGAGGAGACGGTTGGGTG 18
V_SP1SP3_Q4_M01219 TRANSFAC + 51220470 51220480 8.0E-06 CCGCCCCCTGC 11
V_ZBRK1_01_M01105 TRANSFAC + 51224243 51224257 9.0E-06 GGCAGACAGCTCATT 15
V_AP1_C_M00199 TRANSFAC - 51224992 51225000 8.0E-06 ATGAGTCAT 9
V_CTCF_02_M01259 TRANSFAC + 51224367 51224386 8.0E-06 CCAGGGCCTGCAGGGGGCAG 20
V_CTCF_01_M01200 TRANSFAC + 51224369 51224388 1.0E-06 AGGGCCTGCAGGGGGCAGTT 20
V_BLIMP1_Q6_M01066 TRANSFAC + 51222027 51222042 8.0E-06 GAGGCTGGGAAACTGG 16
V_AP1_Q2_01_M00924 TRANSFAC + 51224993 51225004 4.0E-06 TGACTCATGGGC 12
V_TFIII_Q6_M00706 TRANSFAC - 51223079 51223087 6.0E-06 AGAGGGAGG 9
V_NEUROD_02_M01288 TRANSFAC - 51224232 51224243 9.0E-06 CTGCAGCTGGCT 12
V_SP4_Q5_M01273 TRANSFAC + 51223149 51223159 7.0E-06 GCCCCTCCCCG 11
V_PTF1BETA_Q6_M00657 TRANSFAC + 51224528 51224541 1.0E-06 GGGGAAAGCACAGC 14
V_AP1_Q4_01_M00926 TRANSFAC - 51224992 51224999 1.0E-05 TGAGTCAT 8
V_MYF6_04_M02885 TRANSFAC + 51224169 51224183 6.0E-06 ACACACAGACACACC 15
V_FRA1_Q5_M01267 TRANSFAC - 51224992 51224999 1.0E-05 TGAGTCAT 8
V_ZFP281_01_M01597 TRANSFAC - 51223175 51223185 5.0E-06 TGGGGGATGGG 11
V_ZFP281_04_M02831 TRANSFAC + 51223173 51223187 8.0E-06 CGCCCATCCCCCACC 15
V_EWSR1FLI1_01_M02252 TRANSFAC - 51223087 51223104 5.0E-06 GGAGGGGAGGGAGGGAGA 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 51223091 51223108 1.0E-06 GGAGGGAGGGGAGGGAGG 18
V_SMAD3_Q6_M00701 TRANSFAC - 51224242 51224250 1.0E-05 TGTCTGCCT 9
V_UF1H3BETA_Q6_M01068 TRANSFAC - 51223174 51223187 1.0E-06 GGTGGGGGATGGGC 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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