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PCBP2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5094 poly(rC) binding protein 2 chr12 + 53840885 - 53846385 53845885 Transcription Factor Binding Sites   Download all TFBS in the PCBP2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PAX6_PAX_DBD_monomeric_19_1 SELEX - 53850677 53850695 5.0E-06 TTTCATGCACCATTAAGTA 19 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 53850722 53850737 4.0E-06 GGGGGTCAAAAGGTAA 16 Pax6_MA0069.1 JASPAR + 53850615 53850628 2.0E-06 TTAATGCATCAGTT 14 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 53846810 53846821 4.0E-06 TCCATAAATAGC 12 SOX8_HMG_DBD_dimeric_16_1 SELEX + 53846199 53846214 8.0E-06 TACAATTTCCACTTTT 16 SOX9_HMG_DBD_monomeric_9_1 SELEX - 53846082 53846090 4.0E-06 GAACAATAG 9 GATA5_GATA_DBD_monomeric_8_1 SELEX - 53850696 53850703 7.0E-06 AGATAAGA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 53846810 53846821 5.0E-06 TCCATAAATAGC 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 53850719 53850736 3.0E-06 GGGGTCAAAAGGTAACAT 18 GATA4_GATA_DBD_monomeric_8_1 SELEX - 53850696 53850703 7.0E-06 AGATAAGA 8 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX - 53846603 53846612 7.0E-06 AATAAACGGT 10 MEF2B_MADS_full_dimeric_12_1 SELEX - 53846810 53846821 4.0E-06 TCCATAAATAGC 12 NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX - 53850719 53850735 9.0E-06 GGGTCAAAAGGTAACAT 17 MEF2A_MA0052.1 JASPAR + 53846811 53846820 5.0E-06 CTATTTATGG 10 SP1_MA0079.2 JASPAR + 53846366 53846375 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 53846566 53846575 3.0E-06 CCCCTCCCCC 10 NFIX_NFI_full_monomeric_9_2 SELEX + 53848242 53848250 8.0E-06 ATTGCCAAT 9 BARHL2_homeodomain_full_monomeric_10_1 SELEX - 53846603 53846612 3.0E-06 AATAAACGGT 10 Atf4_bZIP_DBD_dimeric_14_1 SELEX + 53845787 53845800 7.0E-06 TGGACGACGCAATC 14 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 53846292 53846308 5.0E-06 CTGTGCCAGGCCGGTCA 17 NFATC1_NFAT_full_dimeric_15_1 SELEX + 53846653 53846667 8.0E-06 TTTCTTAAGTGGAAA 15 NFATC1_NFAT_full_dimeric_15_1 SELEX - 53846653 53846667 8.0E-06 TTTCCACTTAAGAAA 15 SOX7_HMG_full_dimeric_16_1 SELEX - 53846199 53846214 9.0E-06 AAAAGTGGAAATTGTA 16 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 53850721 53850736 0.0E+00 GGGGTCAAAAGGTAAC 16 Gata1_MA0035.2 JASPAR - 53850695 53850705 7.0E-06 AAAGATAAGAT 11 GATA3_GATA_full_monomeric_8_1 SELEX - 53850696 53850703 7.0E-06 AGATAAGA 8 Foxd3_MA0041.1 JASPAR + 53846606 53846617 5.0E-06 GTTTATTTTTTC 12 Nkx3-2_MA0122.1 JASPAR + 53846657 53846665 2.0E-06 TTAAGTGGA 9 SOX9_MA0077.1 JASPAR - 53846082 53846090 9.0E-06 GAACAATAG 9 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 53850722 53850736 1.0E-06 GGGGTCAAAAGGTAA 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 53850562 53850577 6.0E-06 CAGGACAACAGTTCAG 16 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 53850721 53850736 0.0E+00 GGGGTCAAAAGGTAAC 16 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 53846605 53846617 4.0E-06 GAAAAAATAAACG 13 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 53850563 53850577 4.0E-06 CAGGACAACAGTTCA 15 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 53850722 53850736 1.0E-06 GGGGTCAAAAGGTAA 15 RREB1_MA0073.1 JASPAR - 53846445 53846464 2.0E-06 ACCCCCCACAACCAACAAAT 20 RREB1_MA0073.1 JASPAR - 53846447 53846466 3.0E-06 CAACCCCCCACAACCAACAA 20 RREB1_MA0073.1 JASPAR - 53846450 53846469 9.0E-06 CCCCAACCCCCCACAACCAA 20 RREB1_MA0073.1 JASPAR - 53846451 53846470 2.0E-06 CCCCCAACCCCCCACAACCA 20 IRF2_MA0051.1 JASPAR - 53845533 53845550 3.0E-06 GGAAAGAGAAAGGATGAA 18 V_CEBPG_Q6_M00622 TRANSFAC - 53846653 53846665 8.0E-06 TCCACTTAAGAAA 13 V_AP2ALPHA_Q6_M01857 TRANSFAC + 53846091 53846101 6.0E-06 CGCCCCCGGCC 11 V_FOXP3_Q4_M00992 TRANSFAC - 53846161 53846177 4.0E-06 GAAATTTTTAGGCTTAC 17 V_CDX2_Q5_01_M01659 TRANSFAC - 53846811 53846821 1.0E-06 TCCATAAATAG 11 V_EVI1_05_M00082 TRANSFAC - 53850693 53850703 3.0E-06 AGATAAGATTT 11 V_TCFE2A_04_M02927 TRANSFAC - 53845608 53845624 1.0E-06 AAGTTCAGATGTTAGTG 17 V_GATA2_02_M00348 TRANSFAC - 53850696 53850705 1.0E-06 AAAGATAAGA 10 V_DMRT3_01_M01148 TRANSFAC + 53846192 53846206 8.0E-06 CTATGGCTACAATTT 15 V_ZEC_01_M01081 TRANSFAC + 53846445 53846457 8.0E-06 ATTTGTTGGTTGT 13 V_HMGIY_Q3_M01010 TRANSFAC - 53846167 53846181 6.0E-06 AAGGGAAATTTTTAG 15 V_EVI1_04_M00081 TRANSFAC - 53850694 53850708 7.0E-06 GGCAAAGATAAGATT 15 V_EVI1_04_M00081 TRANSFAC + 53850705 53850719 8.0E-06 TGCCAAGATTAGAAA 15 V_EVI1_04_M00081 TRANSFAC + 53850710 53850724 4.0E-06 AGATTAGAAATGTTA 15 V_FOXD3_01_M00130 TRANSFAC + 53846606 53846617 5.0E-06 GTTTATTTTTTC 12 V_DEAF1_01_M01001 TRANSFAC + 53848216 53848240 5.0E-06 GCACGTTCAGCAGTTTCCTTAGAAC 25 V_IK_Q5_M01169 TRANSFAC + 53845753 53845762 3.0E-06 TTTGGGAGGC 10 V_MEF2_02_M00231 TRANSFAC - 53846806 53846827 7.0E-06 ACCCCTTCCATAAATAGCTCGG 22 V_IRF_Q6_01_M00972 TRANSFAC - 53845539 53845549 3.0E-06 GAAAGAGAAAG 11 V_ZFP740_03_M02834 TRANSFAC + 53846021 53846036 2.0E-06 CCTCCACCCCCCCTTC 16 V_IRF2_Q6_M01882 TRANSFAC - 53845536 53845551 3.0E-06 TGGAAAGAGAAAGGAT 16 V_IRF3_05_M02767 TRANSFAC - 53845649 53845662 0.0E+00 CAGAAAGGAAACCA 14 V_SP1_03_M02281 TRANSFAC + 53846366 53846375 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 53846566 53846575 3.0E-06 CCCCTCCCCC 10 V_SPZ1_01_M00446 TRANSFAC - 53846358 53846372 7.0E-06 GGAGGGGGGAATAGG 15 V_PITX2_Q6_M02114 TRANSFAC + 53846794 53846803 1.0E-06 TGTAATCCCA 10 V_LYF1_01_M00141 TRANSFAC + 53845753 53845761 9.0E-06 TTTGGGAGG 9 V_NFAT2_01_M01748 TRANSFAC + 53846661 53846669 8.0E-06 GTGGAAAAT 9 V_HELIOSA_01_M01003 TRANSFAC - 53848770 53848780 7.0E-06 ATTAGGGAAAT 11 V_GC_01_M00255 TRANSFAC - 53846563 53846576 3.0E-06 AGGGGGAGGGGCCG 14 V_POU3F2_01_M00463 TRANSFAC + 53850610 53850623 2.0E-06 CTGCATTAATGCAT 14 V_NFAT_Q6_M00302 TRANSFAC + 53846659 53846670 4.0E-06 AAGTGGAAAATG 12 V_NKX31_02_M02782 TRANSFAC - 53846653 53846669 0.0E+00 ATTTTCCACTTAAGAAA 17 V_RSRFC4_Q2_M00407 TRANSFAC - 53846807 53846823 6.0E-06 CTTCCATAAATAGCTCG 17 V_SP1_Q6_M00196 TRANSFAC - 53846564 53846576 3.0E-06 AGGGGGAGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 53846003 53846016 6.0E-06 GGAGGAGGAAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 53846030 53846043 6.0E-06 GGAGGAGGAAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 53846362 53846375 1.0E-05 GGGGGAGGGGGGAA 14 V_IRF_Q6_M00772 TRANSFAC + 53845535 53845549 9.0E-06 CATCCTTTCTCTTTC 15 V_HNF1_Q6_01_M01011 TRANSFAC - 53845422 53845442 1.0E-06 AAAAGGAAAGAATTAAGCATT 21 V_NKX22_02_M01372 TRANSFAC - 53846652 53846668 7.0E-06 TTTTCCACTTAAGAAAA 17 V_ISRE_01_M00258 TRANSFAC + 53845649 53845663 5.0E-06 TGGTTTCCTTTCTGC 15 V_SFPI1_04_M02896 TRANSFAC + 53848247 53848260 7.0E-06 CAATTGAAAGAACC 14 V_GATA1_09_M02254 TRANSFAC - 53850695 53850705 7.0E-06 AAAGATAAGAT 11 V_RREB1_01_M00257 TRANSFAC - 53846456 53846469 1.0E-06 CCCCAACCCCCCAC 14 V_PNR_01_M01650 TRANSFAC - 53845611 53845624 9.0E-06 AAGTTCAGATGTTA 14 V_NR1B1_Q6_M02110 TRANSFAC - 53845616 53845625 6.0E-06 AAAGTTCAGA 10 V_NKX32_02_M01482 TRANSFAC - 53846653 53846669 0.0E+00 ATTTTCCACTTAAGAAA 17 V_TFIII_Q6_M00706 TRANSFAC - 53850594 53850602 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC + 53846565 53846575 5.0E-06 GCCCCTCCCCC 11 V_ZFP187_04_M02934 TRANSFAC + 53848255 53848270 6.0E-06 AGAACCTTGTTCATCC 16 V_CIZ_01_M00734 TRANSFAC - 53846609 53846617 3.0E-06 GAAAAAATA 9 V_MTF1_06_M02882 TRANSFAC - 53846649 53846662 0.0E+00 ACTTAAGAAAAAAA 14 V_HAND1E47_01_M00222 TRANSFAC + 53848749 53848764 2.0E-06 TGGGGCATCTGGCTTT 16 V_MAZR_01_M00491 TRANSFAC + 53848693 53848705 2.0E-06 AGGGGAGGGGCCA 13 V_TAL1_01_M01591 TRANSFAC + 53845562 53845574 9.0E-06 TTTCCTCCTCTCC 13 V_SIRT6_01_M01797 TRANSFAC - 53850696 53850703 7.0E-06 AGATAAGA 8 V_GATA3_02_M00350 TRANSFAC - 53850696 53850705 1.0E-06 AAAGATAAGA 10 V_NANOG_01_M01123 TRANSFAC + 53848236 53848247 1.0E-05 AGAACCATTGCC 12 V_ZBTB12_04_M02928 TRANSFAC + 53848229 53848243 2.0E-06 TTTCCTTAGAACCAT 15 V_GATA6_01_M00462 TRANSFAC - 53850696 53850705 0.0E+00 AAAGATAAGA 10 V_FPM315_01_M01587 TRANSFAC - 53846008 53846019 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 53846011 53846022 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 53846014 53846025 3.0E-06 GGAGGAGGAGGA 12 V_PITX2_Q2_M00482 TRANSFAC + 53846794 53846804 1.0E-06 TGTAATCCCAG 11 V_ZFP281_01_M01597 TRANSFAC - 53846366 53846376 2.0E-06 GGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 53846566 53846576 3.0E-06 AGGGGGAGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC + 53845537 53845550 4.0E-06 TCCTTTCTCTTTCC 14 V_GATA2_03_M00349 TRANSFAC - 53850696 53850705 2.0E-06 AAAGATAAGA 10 V_SRF_06_M02916 TRANSFAC - 53846645 53846661 3.0E-06 CTTAAGAAAAAAAGCCC 17 V_ZIC3_04_M02837 TRANSFAC + 53845809 53845823 8.0E-06 GGCCCCCGGGGTGGT 15 V_BARHL2_01_M01446 TRANSFAC - 53845416 53845431 8.0E-06 ATTAAGCATTTAACTT 16 V_PIT1_Q6_M00802 TRANSFAC + 53845422 53845439 3.0E-06 AATGCTTAATTCTTTCCT 18 V_UF1H3BETA_Q6_M01068 TRANSFAC + 53846463 53846476 8.0E-06 GTTGGGGGAGGCGA 14 V_GATA6_04_M02757 TRANSFAC - 53850692 53850708 5.0E-06 GGCAAAGATAAGATTTC 17 V_SP1_Q4_01_M00932 TRANSFAC - 53846564 53846576 1.0E-06 AGGGGGAGGGGCC 13 V_TCF3_05_M02920 TRANSFAC - 53846607 53846621 2.0E-06 GGGGGAAAAAATAAA 15 V_ZIC2_04_M02836 TRANSFAC + 53845809 53845823 6.0E-06 GGCCCCCGGGGTGGT 15 V_EVI1_03_M00080 TRANSFAC - 53850693 53850703 2.0E-06 AGATAAGATTT 11 V_SMAD1_01_M01590 TRANSFAC - 53845537 53845548 3.0E-06 AAAGAGAAAGGA 12 V_NANOG_02_M01247 TRANSFAC - 53845533 53845552 6.0E-06 GTGGAAAGAGAAAGGATGAA 20 V_GATA1_06_M00347 TRANSFAC - 53850696 53850705 4.0E-06 AAAGATAAGA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.