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GEMIN4


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
50628 gem (nuclear organelle) associated protein 4 chr17 -655001 - 660501 655501

Transcription Factor Binding Sites

 
Download all TFBS in the GEMIN4 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
PAX6_PAX_DBD_monomeric_19_1 SELEX + 659456 659474 7.0E-06 AATCGCGCTTGGCTAAACA 19
MYF6_bHLH_full_dimeric_10_1 SELEX - 651206 651215 9.0E-06 AGCAGCTGTT 10
NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 651368 651378 1.0E-05 TTTAAAGGACA 11
GLIS1_C2H2_DBD_monomeric_16_1 SELEX + 655236 655251 1.0E-05 AGACCCGCCCCGACGC 16
ZNF238_C2H2_full_monomeric_13_1 SELEX + 651253 651265 8.0E-06 TTCACAGATGTTC 13
NR2F1_MA0017.1 JASPAR - 651260 651273 2.0E-06 GGACCCTTGAACAT 14
Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 655411 655426 5.0E-06 TAACGCCCCCTCCCCT 16
Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 651206 651215 1.0E-06 AACAGCTGCT 10
Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 651206 651215 3.0E-06 AGCAGCTGTT 10
znf143_MA0088.1 JASPAR - 655453 655472 1.0E-06 CGTCTCCCATCGTGCCGTGC 20
CTCF_C2H2_full_monomeric_17_1 SELEX + 655581 655597 7.0E-06 AGCGCCGCCTTCCGGCA 17
SP1_C2H2_DBD_monomeric_11_1 SELEX + 655520 655530 1.0E-05 GCCCCGCCCAC 11
ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 654716 654730 1.0E-05 GGCACACGCTGCTAA 15
FEV_MA0156.1 JASPAR + 655031 655038 1.0E-05 CAGGAAAT 8
IRF5_IRF_full_dimeric_14_1 SELEX + 657729 657742 5.0E-06 AGGAAACCAAACCT 14
TP53_MA0106.1 JASPAR - 655733 655752 8.0E-06 CGGGGCACGCCCGGGGTTAC 20
NRF1_NRF_full_dimeric_12_1 SELEX + 655540 655551 5.0E-06 CGCGCACGCGCA 12
Sox2_MA0143.1 JASPAR - 657717 657731 4.0E-06 CCTTTGTCCTCTTAA 15
NHLH1_bHLH_full_dimeric_10_1 SELEX + 655018 655027 9.0E-06 CGCAGCTGCC 10
MSC_bHLH_full_dimeric_10_1 SELEX + 651206 651215 4.0E-06 AACAGCTGCT 10
Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 656015 656027 6.0E-06 CAAAACACAAACA 13
NFIA_NFI_full_monomeric_10_1 SELEX + 656125 656134 5.0E-06 TGTGCCAAGT 10
Zfx_MA0146.1 JASPAR + 655489 655502 3.0E-06 CGCGCTTAGGCCTG 14
V_FOXP1_01_M00987 TRANSFAC - 658385 658404 8.0E-06 TAATTTATATTGTCAGGTGA 20
V_AP2ALPHA_Q6_M01857 TRANSFAC - 655159 655169 3.0E-06 CGCCTCCGGCC 11
V_GEN_INI_B_M00315 TRANSFAC - 655035 655042 1.0E-05 CCTCATTT 8
V_E2F4_Q6_M02090 TRANSFAC + 656297 656306 1.0E-05 GCGCGAAAAA 10
V_ZFX_01_M01593 TRANSFAC - 655490 655505 6.0E-06 GAGCAGGCCTAAGCGC 16
V_SIX6_02_M01398 TRANSFAC - 654817 654833 9.0E-06 CCTGAGGTATCACTTTG 17
V_HMGIY_Q3_M01010 TRANSFAC + 659474 659488 2.0E-06 ATTTGATTTTTTTAG 15
V_STAT_Q6_M00777 TRANSFAC - 654695 654707 8.0E-06 GGCTGTTCTGGGA 13
V_EGR_Q6_M00807 TRANSFAC - 654840 654850 3.0E-06 GTGGGGGCGGC 11
V_IRF_Q6_01_M00972 TRANSFAC + 659642 659652 9.0E-06 AAAAGGGAAAA 11
V_RP58_01_M00532 TRANSFAC - 651255 651266 6.0E-06 TGAACATCTGTG 12
V_AP4_Q6_M00176 TRANSFAC + 651418 651427 5.0E-06 CACAGCTGGA 10
V_EAR2_Q2_M01728 TRANSFAC - 657721 657734 3.0E-06 TTTCCTTTGTCCTC 14
V_PU1_Q4_M01172 TRANSFAC - 659641 659659 7.0E-06 TTTCTCCTTTTCCCTTTTT 19
V_LYF1_01_M00141 TRANSFAC - 655079 655087 9.0E-06 TTTGGGAAA 9
V_AP4_Q6_01_M00927 TRANSFAC + 651206 651214 1.0E-05 AACAGCTGC 9
V_TGIF2_01_M01407 TRANSFAC - 655922 655937 1.0E-05 GACCAGCCGTCAAAAA 16
V_PAX5_02_M00144 TRANSFAC + 654980 655007 9.0E-06 CGTAAGACACTTGGAGCGTTAAGACACT 28
V_ELF4_04_M02850 TRANSFAC - 659475 659491 4.0E-06 TATCTAAAAAAATCAAA 17
V_GC_01_M00255 TRANSFAC - 655518 655531 3.0E-06 TGTGGGCGGGGCCG 14
V_GEN_INI3_B_M00314 TRANSFAC - 655035 655042 1.0E-05 CCTCATTT 8
V_FOXA2_02_M02853 TRANSFAC - 651173 651187 6.0E-06 AGAATTAACAAAGTC 15
V_TGIF_02_M01346 TRANSFAC - 658383 658399 8.0E-06 TATATTGTCAGGTGAGG 17
V_CART1_01_M00416 TRANSFAC - 658390 658407 1.0E-06 TGTTAATTTATATTGTCA 18
V_SIX1_01_M01313 TRANSFAC - 654817 654833 5.0E-06 CCTGAGGTATCACTTTG 17
V_HNF4_01_B_M00411 TRANSFAC + 657721 657735 9.0E-06 GAGGACAAAGGAAAC 15
V_COUP_01_M00158 TRANSFAC - 651260 651273 2.0E-06 GGACCCTTGAACAT 14
V_SP4_03_M02810 TRANSFAC + 655409 655425 2.0E-06 GCTAACGCCCCCTCCCC 17
V_KROX_Q6_M00982 TRANSFAC + 654840 654853 3.0E-06 GCCGCCCCCACCGC 14
V_SP1_Q6_M00196 TRANSFAC - 655519 655531 5.0E-06 TGTGGGCGGGGCC 13
V_IRF3_Q3_M01279 TRANSFAC - 659643 659655 0.0E+00 TCCTTTTCCCTTT 13
V_MAZ_Q6_01_M02023 TRANSFAC - 655418 655431 2.0E-06 CTCGGAGGGGAGGG 14
V_IRF_Q6_M00772 TRANSFAC - 659502 659516 8.0E-06 TCCGCTTTCTTTTAC 15
V_SP1SP3_Q4_M01219 TRANSFAC + 655413 655423 7.0E-06 ACGCCCCCTCC 11
V_SP1SP3_Q4_M01219 TRANSFAC + 655883 655893 1.0E-06 CCGCCCCCTCC 11
V_TAL1BETAE47_01_M00065 TRANSFAC + 651252 651267 2.0E-06 CTTCACAGATGTTCAA 16
V_SOX12_04_M02900 TRANSFAC + 657719 657734 4.0E-06 AAGAGGACAAAGGAAA 16
V_ISGF3G_03_M02771 TRANSFAC + 659443 659457 9.0E-06 TACAATCTAAACTAA 15
V_TGIF1_01_M03111 TRANSFAC - 658383 658399 8.0E-06 TATATTGTCAGGTGAGG 17
V_SOX11_03_M02795 TRANSFAC + 657719 657735 8.0E-06 AAGAGGACAAAGGAAAC 17
V_SOX11_03_M02795 TRANSFAC - 659378 659394 6.0E-06 TCAGGAACAAAGGCTCT 17
V_SIX2_01_M01433 TRANSFAC - 654817 654833 5.0E-06 CCTGAGGTATCACTTTG 17
V_MZF1_02_M00084 TRANSFAC - 655719 655731 4.0E-06 GGGTGAGGGTGAA 13
V_NEUROD_02_M01288 TRANSFAC - 651417 651428 4.0E-06 CTCCAGCTGTGC 12
V_GLI3_01_M01596 TRANSFAC - 656219 656229 2.0E-06 CTGGGTGGCCT 11
V_SP4_Q5_M01273 TRANSFAC + 655520 655530 9.0E-06 GCCCCGCCCAC 11
V_MYF6_04_M02885 TRANSFAC + 656061 656075 3.0E-06 AGTAACAGCCACTCC 15
V_GEN_INI2_B_M00313 TRANSFAC - 655035 655042 1.0E-05 CCTCATTT 8
V_ZFP206_01_M01742 TRANSFAC + 655540 655550 9.0E-06 CGCGCACGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 655541 655551 7.0E-06 TGCGCGTGCGC 11
V_NRSF_01_M00256 TRANSFAC + 656094 656114 1.0E-06 TCTAGCACCAGGGACCGCCTC 21
V_VDR_Q6_M00961 TRANSFAC - 654810 654821 6.0E-06 CTTTGTGAACCT 12
V_ASCL2_04_M02841 TRANSFAC + 654945 654960 6.0E-06 TTCTCCCCGCTCTGTC 16
V_LEF1TCF1_Q4_M00978 TRANSFAC + 659382 659392 6.0E-06 CCTTTGTTCCT 11
V_SOX2_01_M02246 TRANSFAC - 657717 657731 4.0E-06 CCTTTGTCCTCTTAA 15
V_SRF_06_M02916 TRANSFAC - 659472 659488 1.0E-05 CTAAAAAAATCAAATGT 17
V_FOXO1_04_M01969 TRANSFAC - 655964 655983 4.0E-06 GTAAACCCCACCATGTTTGG 20
V_SOX4_01_M01308 TRANSFAC - 659382 659389 1.0E-05 AACAAAGG 8
V_SP1_Q4_01_M00932 TRANSFAC - 655519 655531 4.0E-06 TGTGGGCGGGGCC 13
V_FEV_01_M02269 TRANSFAC + 655031 655038 1.0E-05 CAGGAAAT 8
V_SMAD1_01_M01590 TRANSFAC + 657721 657732 1.0E-05 GAGGACAAAGGA 12
V_NANOG_02_M01247 TRANSFAC + 657717 657736 0.0E+00 TTAAGAGGACAAAGGAAACC 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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