Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CUZD1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 50624 CUB and zona pellucida-like domains 1 chr10 - 124605191 - 124610691 124605691 Transcription Factor Binding Sites   Download all TFBS in the CUZD1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 124609915 124609926 5.0E-06 TGTTTATTTTGA 12 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 124609914 124609921 5.0E-06 ATAAACAA 8 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 124608191 124608209 2.0E-06 AAAGGTCCTTTTGAGGTCA 19 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX + 124608193 124608210 8.0E-06 AGGTCCTTTTGAGGTCAC 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX - 124608193 124608210 2.0E-06 GTGACCTCAAAAGGACCT 18 FOXA1_MA0148.1 JASPAR + 124609915 124609925 5.0E-06 TGTTTATTTTG 11 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 124607834 124607847 9.0E-06 TTATTAGCTAGTAA 14 FOXF2_MA0030.1 JASPAR - 124609913 124609926 2.0E-06 TCAAAATAAACAAC 14 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 124607649 124607666 5.0E-06 AGAGGCCAAGTCAGGGCA 18 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 124609913 124609924 2.0E-06 AAAATAAACAAC 12 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 124610650 124610667 3.0E-06 CCAATTTGAGATAATAAA 18 FOXL1_forkhead_full_dimeric_13_1 SELEX - 124609914 124609926 2.0E-06 TCAAAATAAACAA 13 GRHL1_CP2_full_dimeric_12_1 SELEX + 124608177 124608188 6.0E-06 GAAACTGGTTTT 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 124608177 124608188 2.0E-06 AAAACCAGTTTC 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 124609914 124609924 4.0E-06 AAAATAAACAA 11 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 124610044 124610060 7.0E-06 GAGGTCAAAAGACTTCG 17 SOX8_HMG_full_dimeric_17_1 SELEX - 124605626 124605642 7.0E-06 CATCAGTTTCATGGAAA 17 ISX_homeodomain_DBD_dimeric_13_1 SELEX - 124610664 124610676 3.0E-06 TTAAACTAATTTA 13 ZNF238_C2H2_full_monomeric_13_1 SELEX - 124607736 124607748 5.0E-06 AGGCCAGATGTGG 13 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 124608192 124608209 7.0E-06 AAGGTCCTTTTGAGGTCA 18 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 124608192 124608209 0.0E+00 AAGGTCCTTTTGAGGTCA 18 POU6F2_POU_DBD_dimeric_16_1 SELEX + 124607833 124607848 3.0E-06 GTTACTAGCTAATAAT 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 124607833 124607848 6.0E-06 ATTATTAGCTAGTAAC 16 Foxq1_MA0040.1 JASPAR + 124609912 124609922 3.0E-06 CGTTGTTTATT 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 124609915 124609925 7.0E-06 CAAAATAAACA 11 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 124607826 124607835 1.0E-06 ACCACCTGTT 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 124609915 124609928 3.0E-06 GTTCAAAATAAACA 14 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 124608193 124608209 1.0E-06 AGGTCCTTTTGAGGTCA 17 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 124605595 124605604 9.0E-06 ACCAGCTGCT 10 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 124605619 124605632 1.0E-06 ATGGAAAATAACTC 14 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 124608193 124608209 1.0E-06 AGGTCCTTTTGAGGTCA 17 znf143_MA0088.1 JASPAR + 124605601 124605620 9.0E-06 TGGTTCCCAGCAGGCACTGA 20 NFATC1_NFAT_full_dimeric_20_1 SELEX + 124605437 124605456 9.0E-06 CAGGGAAACGTCAGTTCCAG 20 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX - 124609832 124609841 1.0E-05 GCAAGGTCAT 10 Lhx3_MA0135.1 JASPAR - 124610658 124610670 1.0E-06 TAATTTATTATCT 13 TFCP2_CP2_full_dimeric_10_1 SELEX - 124608178 124608187 3.0E-06 AAACCAGTTT 10 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 124609915 124609925 3.0E-06 CAAAATAAACA 11 SOX7_HMG_full_dimeric_16_1 SELEX - 124608106 124608121 3.0E-06 AACAGTGATGTGTGTT 16 SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 124607825 124607839 6.0E-06 TAGTAACAGGTGGTA 15 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 124607845 124607861 9.0E-06 TAATTCTTTACATTCAG 17 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 124610664 124610676 4.0E-06 TTAAACTAATTTA 13 MYBL1_MYB_DBD_dimeric_12_1 SELEX - 124610669 124610680 8.0E-06 AAAGTTAAACTA 12 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 124610664 124610676 9.0E-06 TTAAACTAATTTA 13 TFAP4_bHLH_full_dimeric_10_1 SELEX + 124607767 124607776 9.0E-06 CACAGCTGTT 10 Myf_MA0055.1 JASPAR - 124605594 124605605 6.0E-06 AACCAGCTGCTG 12 Myf_MA0055.1 JASPAR - 124608022 124608033 8.0E-06 CAACAGCAGGTG 12 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 124607797 124607812 7.0E-06 GGGGTAAAAAGGAAAA 16 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 124609831 124609841 6.0E-06 GCAAGGTCATT 11 TEAD1_TEA_full_dimeric_17_1 SELEX + 124607845 124607861 4.0E-06 TAATTCTTTACATTCAG 17 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX + 124608190 124608209 0.0E+00 AAAAGGTCCTTTTGAGGTCA 20 GRHL1_CP2_DBD_dimeric_10_1 SELEX - 124608178 124608187 5.0E-06 AAACCAGTTT 10 VDR_nuclearreceptor_full_dimeric_16_1 SELEX + 124608203 124608218 6.0E-06 GAGGTCACTGAGCTCA 16 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 124607834 124607847 8.0E-06 TTATTAGCTAGTAA 14 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 124609914 124609921 5.0E-06 ATAAACAA 8 MSC_bHLH_full_dimeric_10_1 SELEX - 124607767 124607776 9.0E-06 AACAGCTGTG 10 V_MEQ_01_M02049 TRANSFAC + 124608106 124608114 2.0E-06 AACACACAT 9 V_FOXP1_01_M00987 TRANSFAC + 124609905 124609924 9.0E-06 TTTAGTACGTTGTTTATTTT 20 V_CEBPG_Q6_M00622 TRANSFAC - 124609955 124609967 1.0E-06 TTTACTTCAAAAT 13 V_AP2ALPHA_Q6_M01857 TRANSFAC - 124607682 124607692 9.0E-06 AGCCTCCAGCC 11 V_TST1_02_M01316 TRANSFAC - 124610657 124610673 1.0E-06 AACTAATTTATTATCTC 17 V_TST1_02_M01316 TRANSFAC + 124610658 124610674 1.0E-06 AGATAATAAATTAGTTT 17 V_DBX1_01_M01483 TRANSFAC - 124607838 124607854 5.0E-06 TAAAGAATTATTAGCTA 17 V_DBX1_01_M01483 TRANSFAC - 124610654 124610670 8.0E-06 TAATTTATTATCTCAAA 17 V_FREAC7_01_M00293 TRANSFAC - 124609911 124609926 2.0E-06 TCAAAATAAACAACGT 16 V_MYOD_Q6_M00184 TRANSFAC + 124607826 124607835 7.0E-06 ACCACCTGTT 10 V_GATA1_Q6_M02004 TRANSFAC + 124607918 124607932 3.0E-06 GTTACAGATAGGGAA 15 V_CHOP_01_M00249 TRANSFAC - 124608160 124608172 1.0E-05 TACTGCAATCCCC 13 V_ZFP410_04_M02936 TRANSFAC - 124607998 124608014 5.0E-06 GCACTCCTCCCCACTTT 17 V_FOXA2_04_M02749 TRANSFAC - 124609910 124609926 5.0E-06 TCAAAATAAACAACGTA 17 V_BCL6_01_M01183 TRANSFAC + 124607838 124607853 1.0E-06 TAGCTAATAATTCTTT 16 V_BCL6_01_M01183 TRANSFAC + 124610665 124610680 9.0E-06 AAATTAGTTTAACTTT 16 V_ETS_B_M00340 TRANSFAC - 124608009 124608022 9.0E-06 GGCAGGAAGCACTC 14 V_FOXO4_02_M00476 TRANSFAC + 124609911 124609924 1.0E-06 ACGTTGTTTATTTT 14 V_ISL2_01_M01328 TRANSFAC - 124610661 124610676 7.0E-06 TTAAACTAATTTATTA 16 V_NFAT3_Q3_M01734 TRANSFAC + 124605622 124605631 1.0E-05 TTATTTTCCA 10 V_RP58_01_M00532 TRANSFAC + 124607735 124607746 8.0E-06 CCCACATCTGGC 12 V_GCNF_Q3_M02009 TRANSFAC - 124609831 124609840 9.0E-06 CAAGGTCATT 10 V_AP4_Q6_M00176 TRANSFAC + 124607767 124607776 8.0E-06 CACAGCTGTT 10 V_IRF3_05_M02767 TRANSFAC - 124607795 124607808 6.0E-06 TAAAAAGGAAAACA 14 V_HNF3_Q6_01_M01012 TRANSFAC + 124609910 124609927 9.0E-06 TACGTTGTTTATTTTGAA 18 V_OCTAMER_02_M01477 TRANSFAC + 124610659 124610675 1.0E-06 GATAATAAATTAGTTTA 17 V_NERF_Q2_M00531 TRANSFAC - 124608006 124608023 1.0E-06 TGGCAGGAAGCACTCCTC 18 V_LHX3_01_M01471 TRANSFAC - 124610659 124610675 7.0E-06 TAAACTAATTTATTATC 17 V_LHX3_01_M01471 TRANSFAC + 124610660 124610676 7.0E-06 ATAATAAATTAGTTTAA 17 V_E2A_Q2_M00804 TRANSFAC + 124608021 124608034 9.0E-06 CCACCTGCTGTTGT 14 V_HEN1_01_M00068 TRANSFAC + 124607761 124607782 7.0E-06 AGCTGTCACAGCTGTTTCCTTC 22 V_ZFP281_05_M02935 TRANSFAC + 124607803 124607819 3.0E-06 TTTTTACCCCCTTTTAG 17 V_AP4_Q6_01_M00927 TRANSFAC - 124605596 124605604 6.0E-06 ACCAGCTGC 9 V_K2B_01_M01348 TRANSFAC - 124610659 124610675 6.0E-06 TAAACTAATTTATTATC 17 V_NFAT2_01_M01748 TRANSFAC - 124605624 124605632 2.0E-06 ATGGAAAAT 9 V_FOXP3_01_M01599 TRANSFAC - 124609914 124609921 5.0E-06 ATAAACAA 8 V_PAX6_02_M01391 TRANSFAC - 124610659 124610674 3.0E-06 AAACTAATTTATTATC 16 V_PAX6_02_M01391 TRANSFAC + 124610661 124610676 0.0E+00 TAATAAATTAGTTTAA 16 RXRA_VDR_MA0074.1 JASPAR + 124608204 124608218 8.0E-06 AGGTCACTGAGCTCA 15 V_ELF4_04_M02850 TRANSFAC - 124609913 124609929 1.0E-05 AGTTCAAAATAAACAAC 17 V_HELIOSA_02_M01004 TRANSFAC - 124605624 124605634 9.0E-06 TCATGGAAAAT 11 V_HELIOSA_02_M01004 TRANSFAC - 124607796 124607806 2.0E-06 AAAAGGAAAAC 11 V_TCF3_04_M02816 TRANSFAC - 124609951 124609967 8.0E-06 TTTACTTCAAAATACAC 17 V_POU3F2_01_M00463 TRANSFAC - 124610663 124610676 6.0E-06 TTAAACTAATTTAT 14 V_MYF_01_M01302 TRANSFAC - 124605594 124605605 6.0E-06 AACCAGCTGCTG 12 V_MYF_01_M01302 TRANSFAC - 124608022 124608033 8.0E-06 CAACAGCAGGTG 12 V_DBX2_01_M01360 TRANSFAC + 124610659 124610674 3.0E-06 GATAATAAATTAGTTT 16 V_DBX2_01_M01360 TRANSFAC - 124610661 124610676 1.0E-06 TTAAACTAATTTATTA 16 V_FOXO1_02_M00474 TRANSFAC + 124609911 124609924 7.0E-06 ACGTTGTTTATTTT 14 V_HNF4_01_B_M00411 TRANSFAC - 124608046 124608060 9.0E-06 AAGGCCAAAGCCCAG 15 V_STAF_01_M00262 TRANSFAC + 124605602 124605623 6.0E-06 GGTTCCCAGCAGGCACTGAGTT 22 V_NFAT_Q6_M00302 TRANSFAC - 124607795 124607806 1.0E-05 AAAAGGAAAACA 12 V_E12_Q6_M00693 TRANSFAC - 124608019 124608029 8.0E-06 AGCAGGTGGCA 11 V_IRF3_Q3_M01279 TRANSFAC + 124607793 124607805 2.0E-06 TCTGTTTTCCTTT 13 V_CDX2_01_M01449 TRANSFAC + 124610656 124610671 5.0E-06 TGAGATAATAAATTAG 16 V_E47_02_M00071 TRANSFAC - 124607823 124607838 2.0E-06 AGTAACAGGTGGTAAT 16 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 124609915 124609925 2.0E-06 TGTTTATTTTG 11 V_IRF_Q6_M00772 TRANSFAC + 124607793 124607807 6.0E-06 TCTGTTTTCCTTTTT 15 V_LHX2_01_M01325 TRANSFAC - 124610659 124610675 3.0E-06 TAAACTAATTTATTATC 17 V_PAX4_05_M01385 TRANSFAC - 124610659 124610675 9.0E-06 TAAACTAATTTATTATC 17 V_ISRE_01_M00258 TRANSFAC + 124610669 124610683 9.0E-06 TAGTTTAACTTTCTG 15 V_SFPI1_04_M02896 TRANSFAC - 124607774 124607787 5.0E-06 CAAATGAAGGAAAC 14 V_CDX1_01_M01373 TRANSFAC + 124610656 124610671 6.0E-06 TGAGATAATAAATTAG 16 V_OCT1_08_M01354 TRANSFAC + 124610655 124610670 5.0E-06 TTGAGATAATAAATTA 16 V_OCT1_08_M01354 TRANSFAC - 124610661 124610676 1.0E-06 TTAAACTAATTTATTA 16 V_PIT1_01_M01465 TRANSFAC - 124610657 124610673 1.0E-06 AACTAATTTATTATCTC 17 V_PIT1_01_M01465 TRANSFAC + 124610658 124610674 1.0E-06 AGATAATAAATTAGTTT 17 V_AP4_Q5_M00175 TRANSFAC + 124607767 124607776 8.0E-06 CACAGCTGTT 10 V_TAL1BETAE47_01_M00065 TRANSFAC - 124607823 124607838 1.0E-05 AGTAACAGGTGGTAAT 16 V_TCF7_03_M02817 TRANSFAC - 124609916 124609932 8.0E-06 ACAAGTTCAAAATAAAC 17 V_TCF7_03_M02817 TRANSFAC - 124609951 124609967 6.0E-06 TTTACTTCAAAATACAC 17 V_XFD2_01_M00268 TRANSFAC - 124609911 124609924 2.0E-06 AAAATAAACAACGT 14 V_HFH1_01_M00129 TRANSFAC + 124609912 124609923 1.0E-06 CGTTGTTTATTT 12 V_NCX_02_M01420 TRANSFAC - 124607838 124607854 1.0E-06 TAAAGAATTATTAGCTA 17 V_NCX_02_M01420 TRANSFAC + 124610657 124610673 1.0E-05 GAGATAATAAATTAGTT 17 V_HNF4A_Q6_01_M02016 TRANSFAC - 124608051 124608065 9.0E-06 AGCCAAAGGCCAAAG 15 V_HB24_01_M01399 TRANSFAC + 124610658 124610672 2.0E-06 AGATAATAAATTAGT 15 V_HB24_01_M01399 TRANSFAC - 124610659 124610673 2.0E-06 AACTAATTTATTATC 15 V_LHX3b_01_M01971 TRANSFAC - 124610664 124610673 1.0E-05 AACTAATTTA 10 V_FREAC2_01_M00290 TRANSFAC - 124609911 124609926 6.0E-06 TCAAAATAAACAACGT 16 V_HFH8_01_M00294 TRANSFAC + 124609912 124609924 2.0E-06 CGTTGTTTATTTT 13 V_BRN4_01_M01473 TRANSFAC - 124610657 124610673 1.0E-06 AACTAATTTATTATCTC 17 V_BRN4_01_M01473 TRANSFAC + 124610658 124610674 1.0E-06 AGATAATAAATTAGTTT 17 V_FOXL1_02_M02857 TRANSFAC - 124609914 124609929 2.0E-06 AGTTCAAAATAAACAA 16 V_HEN1_02_M00058 TRANSFAC - 124607761 124607782 1.0E-05 GAAGGAAACAGCTGTGACAGCT 22 V_FOXL1_04_M02753 TRANSFAC - 124609910 124609926 5.0E-06 TCAAAATAAACAACGTA 17 V_GATA3_02_M00350 TRANSFAC + 124610656 124610665 3.0E-06 TGAGATAATA 10 V_NKX61_02_M01469 TRANSFAC - 124610657 124610672 3.0E-06 ACTAATTTATTATCTC 16 V_AIRE_01_M00999 TRANSFAC - 124610635 124610660 3.0E-06 TCTCAAATTGGATTTCTTGGGAGAAT 26 V_LMX1B_01_M01363 TRANSFAC + 124610659 124610675 5.0E-06 GATAATAAATTAGTTTA 17 V_LMX1B_01_M01363 TRANSFAC - 124610660 124610676 9.0E-06 TTAAACTAATTTATTAT 17 V_FOXO3_01_M00477 TRANSFAC + 124609911 124609924 2.0E-06 ACGTTGTTTATTTT 14 V_FOXA2_03_M02260 TRANSFAC + 124609915 124609926 5.0E-06 TGTTTATTTTGA 12 V_FOX_Q2_M00809 TRANSFAC + 124609912 124609924 1.0E-06 CGTTGTTTATTTT 13 V_BARX2_01_M01431 TRANSFAC + 124610661 124610676 6.0E-06 TAATAAATTAGTTTAA 16 V_LMO2COM_02_M00278 TRANSFAC + 124607922 124607930 7.0E-06 CAGATAGGG 9 V_PLZF_02_M01075 TRANSFAC - 124607838 124607866 0.0E+00 GTATACTGAATGTAAAGAATTATTAGCTA 29 V_GATA2_03_M00349 TRANSFAC + 124610656 124610665 7.0E-06 TGAGATAATA 10 V_FOXJ2_01_M00422 TRANSFAC - 124609910 124609927 0.0E+00 TTCAAAATAAACAACGTA 18 V_HNF1A_Q5_M02013 TRANSFAC + 124607839 124607849 3.0E-06 AGCTAATAATT 11 V_HOXD8_01_M01432 TRANSFAC - 124607838 124607854 1.0E-06 TAAAGAATTATTAGCTA 17 V_SOX1_03_M02802 TRANSFAC + 124607842 124607857 7.0E-06 TAATAATTCTTTACAT 16 V_FOXO1_01_M00473 TRANSFAC - 124609913 124609922 4.0E-06 AATAAACAAC 10 V_HNF3B_Q6_M02014 TRANSFAC + 124609914 124609922 6.0E-06 TTGTTTATT 9 V_BRN3C_01_M01408 TRANSFAC - 124610657 124610672 6.0E-06 ACTAATTTATTATCTC 16 V_BRN3C_01_M01408 TRANSFAC + 124610659 124610674 7.0E-06 GATAATAAATTAGTTT 16 V_HOXA10_01_M01464 TRANSFAC + 124610657 124610672 6.0E-06 GAGATAATAAATTAGT 16 V_GATA1_02_M00126 TRANSFAC + 124607919 124607932 3.0E-06 TTACAGATAGGGAA 14 V_STAT1_05_M01260 TRANSFAC - 124605617 124605638 8.0E-06 AGTTTCATGGAAAATAACTCAG 22 V_FOXK1_03_M02752 TRANSFAC - 124609910 124609926 8.0E-06 TCAAAATAAACAACGTA 17 V_VDRRXR_01_M01202 TRANSFAC + 124608204 124608218 8.0E-06 AGGTCACTGAGCTCA 15 V_T3RALPHA_Q6_M01724 TRANSFAC + 124608200 124608210 3.0E-06 TTTGAGGTCAC 11 V_HOXC9_01_M01416 TRANSFAC + 124610656 124610671 4.0E-06 TGAGATAATAAATTAG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.