Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PA2G4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 5036 proliferation-associated 2G4, 38kDa chr12 + 56493102 - 56498602 56498102 Transcription Factor Binding Sites   Download all TFBS in the PA2G4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HES5_bHLH_DBD_dimeric_12_1 SELEX - 56499041 56499052 7.0E-06 CAACACGTGCCG 12 Myc_MA0147.1 JASPAR - 56499134 56499143 7.0E-06 AGCACGTGGT 10 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 56498891 56498907 4.0E-06 AGGAACAAGAGAAAACA 17 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 56497611 56497619 8.0E-06 AAAAGTCAT 9 MAX_bHLH_DBD_dimeric_10_1 SELEX - 56499042 56499051 1.0E-05 AACACGTGCC 10 MAX_bHLH_DBD_dimeric_10_1 SELEX + 56499134 56499143 1.0E-06 ACCACGTGCT 10 EWSR1-FLI1_MA0149.1 JASPAR - 56499154 56499171 2.0E-06 TGAAGTAAAGAAGGAAAG 18 Spz1_MA0111.1 JASPAR - 56499172 56499182 3.0E-06 AGGGTAAGAGC 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 56497626 56497636 8.0E-06 AAAAATAAAAA 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 56497027 56497040 8.0E-06 GTAAACCATAATCC 14 MNT_bHLH_DBD_dimeric_10_1 SELEX - 56499042 56499051 4.0E-06 AACACGTGCC 10 MNT_bHLH_DBD_dimeric_10_1 SELEX + 56499134 56499143 2.0E-06 ACCACGTGCT 10 znf143_MA0088.1 JASPAR - 56498248 56498267 0.0E+00 CAATTCCCAGCCTGCCTCTC 20 znf143_MA0088.1 JASPAR + 56498318 56498337 2.0E-06 GTTGTCCCAGCGTGCCCTGC 20 SP4_C2H2_full_monomeric_17_1 SELEX + 56498030 56498046 1.0E-05 GTAGCTCCGCCCCTCTC 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 56497626 56497636 4.0E-06 AAAAATAAAAA 11 CPEB1_RRM_full_monomeric_8_1 SELEX - 56497626 56497633 4.0E-06 AATAAAAA 8 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 56497626 56497638 1.0E-06 GAAAAAATAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 56497626 56497638 5.0E-06 GAAAAAATAAAAA 13 TP63_p53l_DBD_dimeric_18_1 SELEX - 56498887 56498904 9.0E-06 AACAAGAGAAAACACGTC 18 ZIC1_C2H2_full_monomeric_14_1 SELEX + 56497964 56497977 5.0E-06 GCCCACCCGCTGCG 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 56496903 56496916 3.0E-06 AAAAACAAGAAACA 14 V_ELF5_03_M02057 TRANSFAC - 56498104 56498113 5.0E-06 CCCGGAAAAA 10 V_FOXP3_Q4_M00992 TRANSFAC + 56498887 56498903 4.0E-06 GACGTGTTTTCTCTTGT 17 V_AML_Q6_M00769 TRANSFAC - 56498438 56498452 9.0E-06 CAGGCTGTGGTCAGA 15 V_MYOD_Q6_M00184 TRANSFAC + 56497835 56497844 7.0E-06 TCCACCTGTC 10 V_BTEB3_Q5_M01865 TRANSFAC - 56497673 56497685 3.0E-06 CTAAGGGAAGTGT 13 V_SOX14_05_M02902 TRANSFAC - 56497017 56497031 7.0E-06 TTTACACAAAGATGT 15 V_ZFP410_04_M02936 TRANSFAC + 56498050 56498066 9.0E-06 TCAGCCCGCCCCTCTCT 17 V_MAFK_03_M02776 TRANSFAC - 56497613 56497627 3.0E-06 AAGATTTGATGACTT 15 V_SOX30_03_M02804 TRANSFAC + 56497709 56497724 7.0E-06 TTGGAACAATAAAGTC 16 V_EVI1_04_M00081 TRANSFAC - 56497622 56497636 5.0E-06 AAAAATAAAAAGATT 15 V_FOXD3_01_M00130 TRANSFAC + 56497627 56497638 9.0E-06 TTTTATTTTTTC 12 V_BCL6_01_M01183 TRANSFAC + 56497622 56497637 6.0E-06 AATCTTTTTATTTTTT 16 V_MAFB_05_M02775 TRANSFAC - 56497610 56497626 7.0E-06 AGATTTGATGACTTTTC 17 V_STAT_Q6_M00777 TRANSFAC - 56497605 56497617 7.0E-06 GACTTTTCTAAGA 13 V_STAT_Q6_M00777 TRANSFAC + 56498102 56498114 1.0E-05 GGTTTTTCCGGGA 13 V_HOXA13_02_M01297 TRANSFAC - 56497626 56497634 4.0E-06 AAATAAAAA 9 V_NFAT3_Q3_M01734 TRANSFAC - 56497002 56497011 4.0E-06 TATTTTTCCT 10 V_FOXO3A_Q1_M01137 TRANSFAC - 56497626 56497637 7.0E-06 AAAAAATAAAAA 12 V_AFP1_Q6_M00616 TRANSFAC + 56497008 56497018 5.0E-06 AATAACTGGAC 11 V_LDSPOLYA_B_M00317 TRANSFAC + 56498887 56498902 5.0E-06 GACGTGTTTTCTCTTG 16 V_PAX4_01_M00373 TRANSFAC + 56498688 56498708 8.0E-06 AGGGGTCATGCGGACTGAGCT 21 V_MYC_01_M02250 TRANSFAC - 56499134 56499143 7.0E-06 AGCACGTGGT 10 V_ELF4_04_M02850 TRANSFAC - 56497624 56497640 4.0E-06 GTGAAAAAATAAAAAGA 17 V_COMP1_01_M00057 TRANSFAC - 56496900 56496923 6.0E-06 TCAGTGCAAAAACAAGAAACAGTG 24 V_SOX13_03_M02797 TRANSFAC + 56497708 56497723 0.0E+00 ATTGGAACAATAAAGT 16 V_SOX7_03_M02807 TRANSFAC + 56497706 56497727 9.0E-06 TTATTGGAACAATAAAGTCATG 22 V_ETV7_01_M02071 TRANSFAC - 56498104 56498113 2.0E-06 CCCGGAAAAA 10 V_HELIOSA_02_M01004 TRANSFAC + 56496999 56497009 6.0E-06 AGAAGGAAAAA 11 V_ZFP105_03_M02827 TRANSFAC - 56497623 56497637 0.0E+00 AAAAAATAAAAAGAT 15 V_MYCMAX_01_M00118 TRANSFAC - 56499132 56499145 8.0E-06 AAAGCACGTGGTGG 14 V_STAF_01_M00262 TRANSFAC + 56498172 56498193 4.0E-06 CCTTCCCAGAGTGCCCGGCGAT 22 V_STAF_01_M00262 TRANSFAC + 56498319 56498340 1.0E-06 TTGTCCCAGCGTGCCCTGCGCC 22 V_CMYC_01_M01145 TRANSFAC + 56499133 56499144 8.0E-06 CACCACGTGCTT 12 V_XFD3_01_M00269 TRANSFAC + 56497024 56497037 7.0E-06 TGTGTAAACCATAA 14 V_IRF3_Q3_M01279 TRANSFAC - 56497000 56497012 2.0E-06 TTATTTTTCCTTC 13 MYC_MAX_MA0059.1 JASPAR - 56499134 56499144 0.0E+00 AAGCACGTGGT 11 V_AP2BETA_Q3_M01858 TRANSFAC - 56498046 56498061 3.0E-06 GGGGCGGGCTGAGGGG 16 V_HNF3_Q6_M00791 TRANSFAC - 56497624 56497636 6.0E-06 AAAAATAAAAAGA 13 V_SOX18_03_M02801 TRANSFAC - 56497707 56497722 2.0E-06 CTTTATTGTTCCAATA 16 V_SZF11_01_M01109 TRANSFAC - 56499170 56499184 1.0E-06 CCAGGGTAAGAGCTG 15 V_SMAD4_Q6_M00733 TRANSFAC - 56499067 56499081 6.0E-06 GGGGGCCAGCCATCC 15 V_STAF_02_M00264 TRANSFAC + 56498172 56498192 1.0E-06 CCTTCCCAGAGTGCCCGGCGA 21 V_STAF_02_M00264 TRANSFAC - 56498246 56498266 1.0E-06 AATTCCCAGCCTGCCTCTCGC 21 V_STAF_02_M00264 TRANSFAC + 56498319 56498339 2.0E-06 TTGTCCCAGCGTGCCCTGCGC 21 V_SOX11_03_M02795 TRANSFAC + 56497708 56497724 1.0E-05 ATTGGAACAATAAAGTC 17 V_FOXO1_Q5_M01216 TRANSFAC - 56496908 56496916 8.0E-06 AAAAACAAG 9 V_FOXO1_Q5_M01216 TRANSFAC - 56499002 56499010 1.0E-05 AAAAACAGA 9 V_SOX15_03_M02799 TRANSFAC + 56497708 56497724 1.0E-06 ATTGGAACAATAAAGTC 17 V_MTF1_06_M02882 TRANSFAC - 56497624 56497637 3.0E-06 AAAAAATAAAAAGA 14 V_PLZF_02_M01075 TRANSFAC + 56497706 56497734 2.0E-06 TTATTGGAACAATAAAGTCATGTTACTTC 29 V_SOX21_04_M02907 TRANSFAC - 56497707 56497723 0.0E+00 ACTTTATTGTTCCAATA 17 V_SOX8_03_M02808 TRANSFAC - 56497708 56497724 4.0E-06 GACTTTATTGTTCCAAT 17 V_SRF_06_M02916 TRANSFAC - 56497622 56497638 4.0E-06 GAAAAAATAAAAAGATT 17 V_SRF_06_M02916 TRANSFAC - 56497623 56497639 1.0E-05 TGAAAAAATAAAAAGAT 17 V_SRF_06_M02916 TRANSFAC - 56497624 56497640 1.0E-06 GTGAAAAAATAAAAAGA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 56499154 56499171 2.0E-06 TGAAGTAAAGAAGGAAAG 18 V_FOXO1_01_M00473 TRANSFAC - 56496908 56496917 9.0E-06 CAAAAACAAG 10 V_SOX12_03_M02796 TRANSFAC - 56497707 56497720 1.0E-06 TTATTGTTCCAATA 14 V_SRY_05_M02917 TRANSFAC + 56497707 56497723 3.0E-06 TATTGGAACAATAAAGT 17 V_LPOLYA_B_M00318 TRANSFAC + 56497715 56497722 7.0E-06 CAATAAAG 8 V_CMAF_01_M01070 TRANSFAC - 56497608 56497626 3.0E-06 AGATTTGATGACTTTTCTA 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.