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NPAS1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4861 neuronal PAS domain protein 1 chr19 + 47519142 - 47524642 47524142 Transcription Factor Binding Sites   Download all TFBS in the NPAS1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 47526359 47526376 9.0E-06 AATTTAAATGGTGATTTA 18 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 47526492 47526505 7.0E-06 GACAAGATGTTTAT 14 EVX2_homeodomain_DBD_monomeric_10_1 SELEX + 47526399 47526408 1.0E-05 GGTAATTAGG 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 47526355 47526372 7.0E-06 GCAATAAATCACCATTTA 18 EN2_homeodomain_full_monomeric_10_1 SELEX - 47526399 47526408 1.0E-05 CCTAATTACC 10 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX + 47525229 47525246 3.0E-06 GTGTCCCTATCAGGTGGC 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX - 47525229 47525246 3.0E-06 GCCACCTGATAGGGACAC 18 En1_MA0027.1 JASPAR + 47523671 47523681 5.0E-06 AAGTTGTGGTC 11 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 47526401 47526415 1.0E-06 TAATTAGGCGAATTG 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 47526401 47526415 1.0E-06 CAATTCGCCTAATTA 15 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 47526374 47526382 9.0E-06 TATTTAAAT 9 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 47525696 47525707 9.0E-06 TTTTTTCCCACT 12 POU1F1_POU_DBD_monomeric_14_1 SELEX - 47526371 47526384 3.0E-06 ATTATTTAAATTTA 14 GATA5_GATA_DBD_monomeric_8_1 SELEX + 47522553 47522560 7.0E-06 AGATAAGA 8 POU2F2_POU_DBD_monomeric_11_1 SELEX - 47526373 47526383 5.0E-06 TTATTTAAATT 11 GATA4_GATA_DBD_monomeric_8_1 SELEX + 47522553 47522560 7.0E-06 AGATAAGA 8 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX + 47525229 47525246 1.0E-06 GTGTCCCTATCAGGTGGC 18 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX - 47525229 47525246 3.0E-06 GCCACCTGATAGGGACAC 18 POU3F3_POU_DBD_monomeric_13_1 SELEX - 47526372 47526384 1.0E-06 ATTATTTAAATTT 13 SP1_MA0079.2 JASPAR + 47523047 47523056 7.0E-06 CCCCGCCCCC 10 SOX14_HMG_DBD_dimeric_13_1 SELEX + 47526334 47526346 1.0E-06 AAAATAGCATTGA 13 SP4_C2H2_full_monomeric_17_1 SELEX + 47523043 47523059 7.0E-06 CAGACCCCGCCCCCGCC 17 NFATC1_NFAT_full_dimeric_20_1 SELEX + 47525696 47525715 8.0E-06 AGTGGGAAAAAACGGTCCAA 20 Lhx3_MA0135.1 JASPAR + 47526373 47526385 2.0E-06 AATTTAAATAATC 13 SP1_C2H2_DBD_monomeric_11_1 SELEX + 47523046 47523056 4.0E-06 ACCCCGCCCCC 11 GATA3_GATA_full_monomeric_8_1 SELEX + 47522553 47522560 7.0E-06 AGATAAGA 8 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 47526355 47526372 2.0E-06 GCAATAAATCACCATTTA 18 POU3F1_POU_DBD_monomeric_12_1 SELEX - 47526372 47526383 3.0E-06 TTATTTAAATTT 12 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 47526400 47526416 4.0E-06 GTAATTAGGCGAATTGA 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 47526400 47526416 8.0E-06 TCAATTCGCCTAATTAC 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 47526448 47526464 0.0E+00 CTGATTACTGTCATTAC 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 47526448 47526464 0.0E+00 GTAATGACAGTAATCAG 17 Pou5f1_MA0142.1 JASPAR + 47526367 47526381 8.0E-06 CATTTAAATTTAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 47526373 47526384 2.0E-06 ATTATTTAAATT 12 FOXO3_forkhead_full_dimeric_14_1 SELEX - 47526492 47526505 5.0E-06 GACAAGATGTTTAT 14 PLAG1_MA0163.1 JASPAR + 47526525 47526538 3.0E-06 GGGGGGAAAGGGGG 14 POU3F3_POU_DBD_dimeric_12_1 SELEX + 47521657 47521668 8.0E-06 ATAAATAAGGAT 12 Sox3_HMG_DBD_dimeric_17_1 SELEX + 47526332 47526348 7.0E-06 AGAAAATAGCATTGATT 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 47526332 47526348 6.0E-06 AATCAATGCTATTTTCT 17 POU3F2_POU_DBD_monomeric_12_1 SELEX - 47526372 47526383 6.0E-06 TTATTTAAATTT 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 47526355 47526372 2.0E-06 GCAATAAATCACCATTTA 18 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 47526492 47526505 7.0E-06 ATAAACATCTTGTC 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 47528067 47528079 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 47528068 47528080 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 47528069 47528081 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 47528070 47528082 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 47528071 47528083 6.0E-06 AAAAAAAAAAAAA 13 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 47526492 47526505 1.0E-05 ATAAACATCTTGTC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 47526492 47526505 3.0E-06 GACAAGATGTTTAT 14 V_FOXP1_01_M00987 TRANSFAC + 47528060 47528079 4.0E-06 CTATTGCTTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 47528063 47528082 0.0E+00 TTGCTTTTTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 47528064 47528083 1.0E-06 TGCTTTTTTTTTTTTTTTTT 20 V_DBX1_01_M01483 TRANSFAC + 47526367 47526383 9.0E-06 CATTTAAATTTAAATAA 17 V_EBF_Q6_M00977 TRANSFAC - 47526311 47526321 2.0E-06 TTCCCCTGGGA 11 V_GATA2_02_M00348 TRANSFAC + 47522551 47522560 5.0E-06 GGAGATAAGA 10 V_HNF1_02_M01379 TRANSFAC - 47524558 47524574 5.0E-06 CGGTAGTTAACTCAAGG 17 V_HNF1_02_M01379 TRANSFAC + 47524559 47524575 7.0E-06 CTTGAGTTAACTACCGT 17 V_HMGIY_Q3_M01010 TRANSFAC - 47526330 47526344 6.0E-06 AATGCTATTTTCTCT 15 V_HMGIY_Q3_M01010 TRANSFAC + 47528062 47528076 2.0E-06 ATTGCTTTTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC + 47521655 47521669 8.0E-06 GGATAAATAAGGATC 15 V_EVI1_04_M00081 TRANSFAC - 47528067 47528081 6.0E-06 AAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 47528068 47528082 6.0E-06 AAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 47528069 47528083 6.0E-06 AAAAAAAAAAAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 47528066 47528081 2.0E-06 CTTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 47528067 47528082 0.0E+00 TTTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 47528068 47528083 0.0E+00 TTTTTTTTTTTTTTTT 16 V_COE1_Q6_M01871 TRANSFAC + 47526311 47526324 2.0E-06 TCCCAGGGGAAGAG 14 V_POU5F1_02_M02245 TRANSFAC + 47526367 47526381 8.0E-06 CATTTAAATTTAAAT 15 V_SP1_Q6_01_M00931 TRANSFAC - 47523046 47523055 7.0E-06 GGGGCGGGGT 10 V_EVI1_02_M00079 TRANSFAC - 47522806 47522816 7.0E-06 GGACAAGACAG 11 V_POU2F3_01_M01476 TRANSFAC - 47526370 47526385 9.0E-06 GATTATTTAAATTTAA 16 V_MAF_Q6_M00648 TRANSFAC + 47523664 47523679 1.0E-06 AGGGAGGAAGTTGTGG 16 V_SP1_03_M02281 TRANSFAC + 47523047 47523056 7.0E-06 CCCCGCCCCC 10 V_HOXA2_01_M01402 TRANSFAC + 47526397 47526412 9.0E-06 GCGGTAATTAGGCGAA 16 V_NKX61_03_M01489 TRANSFAC + 47526371 47526387 9.0E-06 TAAATTTAAATAATCCG 17 V_NKX24_01_M01350 TRANSFAC - 47525689 47525704 2.0E-06 TTTCCCACTTCACATT 16 V_SP1_02_M01303 TRANSFAC - 47523045 47523055 8.0E-06 GGGGCGGGGTC 11 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 47526264 47526279 3.0E-06 TGTCCTTAGGGTGGGG 16 V_TCFAP2E_04_M02926 TRANSFAC - 47528066 47528079 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC - 47528067 47528080 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 47528068 47528081 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 47528069 47528082 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 47528070 47528083 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 47528071 47528084 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 47528072 47528085 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 47528073 47528086 0.0E+00 TTCAAAAAAAAAAA 14 V_WT1_Q6_01_M02036 TRANSFAC + 47523050 47523059 4.0E-06 CGCCCCCGCC 10 V_RPC155_01_M01798 TRANSFAC - 47522724 47522739 2.0E-06 TCCAGAATTCGAGACC 16 V_ELF4_04_M02850 TRANSFAC - 47528065 47528081 5.0E-06 AAAAAAAAAAAAAAAGC 17 V_ELF4_04_M02850 TRANSFAC - 47528067 47528083 6.0E-06 AAAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 47528069 47528085 2.0E-06 TCAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 47528070 47528086 1.0E-06 TTCAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 47528071 47528087 0.0E+00 TTTCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 47528072 47528088 0.0E+00 GTTTCAAAAAAAAAAAA 17 V_ZNF219_01_M01122 TRANSFAC + 47523911 47523922 5.0E-06 CGCCCCCCGCCC 12 V_LMX1_01_M01409 TRANSFAC - 47526371 47526387 3.0E-06 CGGATTATTTAAATTTA 17 V_ZFP105_03_M02827 TRANSFAC - 47528064 47528078 1.0E-06 AAAAAAAAAAAAGCA 15 V_ZFP105_03_M02827 TRANSFAC - 47528065 47528079 9.0E-06 AAAAAAAAAAAAAGC 15 V_ZFP105_03_M02827 TRANSFAC - 47528066 47528080 0.0E+00 AAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC - 47528067 47528081 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 47528068 47528082 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 47528069 47528083 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 47528070 47528084 1.0E-06 CAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 47528071 47528085 2.0E-06 TCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 47528072 47528086 0.0E+00 TTCAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 47528073 47528087 4.0E-06 TTTCAAAAAAAAAAA 15 V_KROX_Q6_M00982 TRANSFAC + 47523048 47523061 1.0E-06 CCCGCCCCCGCCCG 14 V_EGR1_Q6_M01873 TRANSFAC - 47523049 47523058 4.0E-06 GCGGGGGCGG 10 V_GSH2_01_M01326 TRANSFAC + 47526397 47526412 7.0E-06 GCGGTAATTAGGCGAA 16 V_NKX25_Q5_M01043 TRANSFAC - 47525693 47525702 6.0E-06 TCCCACTTCA 10 V_OCT1_04_M00138 TRANSFAC + 47526360 47526382 1.0E-06 AAATCACCATTTAAATTTAAATA 23 V_OCT1_04_M00138 TRANSFAC - 47526367 47526389 7.0E-06 GCCGGATTATTTAAATTTAAATG 23 V_ARID3A_04_M02735 TRANSFAC - 47526371 47526387 1.0E-06 CGGATTATTTAAATTTA 17 V_SP3_Q3_M00665 TRANSFAC + 47522669 47522682 5.0E-06 AGCCCTGTGGGGGG 14 V_SP1_01_M00008 TRANSFAC - 47523046 47523055 3.0E-06 GGGGCGGGGT 10 V_TBP_06_M02814 TRANSFAC + 47526369 47526384 5.0E-06 TTTAAATTTAAATAAT 16 V_TBP_06_M02814 TRANSFAC - 47526369 47526384 3.0E-06 ATTATTTAAATTTAAA 16 V_TBP_06_M02814 TRANSFAC - 47526371 47526386 7.0E-06 GGATTATTTAAATTTA 16 V_LIM1_01_M01418 TRANSFAC - 47526371 47526387 5.0E-06 CGGATTATTTAAATTTA 17 V_FXR_IR1_Q6_M00767 TRANSFAC + 47522620 47522632 4.0E-06 AGGTGTATGTCCC 13 V_MTF1_06_M02882 TRANSFAC - 47528065 47528078 5.0E-06 AAAAAAAAAAAAGC 14 V_MTF1_06_M02882 TRANSFAC - 47528066 47528079 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 47528067 47528080 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 47528068 47528081 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 47528069 47528082 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 47528070 47528083 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 47528071 47528084 8.0E-06 CAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 47528067 47528080 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 47528068 47528081 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 47528069 47528082 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 47528070 47528083 3.0E-06 AAAAAAAAAAAAAA 14 V_OCT2_01_M01368 TRANSFAC - 47526370 47526385 5.0E-06 GATTATTTAAATTTAA 16 V_SIRT6_01_M01797 TRANSFAC + 47522553 47522560 7.0E-06 AGATAAGA 8 V_FOXL1_04_M02753 TRANSFAC + 47526371 47526387 3.0E-06 TAAATTTAAATAATCCG 17 V_GATA3_02_M00350 TRANSFAC + 47522551 47522560 5.0E-06 GGAGATAAGA 10 V_NCX_01_M00484 TRANSFAC + 47526398 47526407 8.0E-06 CGGTAATTAG 10 V_LMX1B_01_M01363 TRANSFAC + 47526371 47526387 7.0E-06 TAAATTTAAATAATCCG 17 V_PLZF_02_M01075 TRANSFAC + 47521646 47521674 2.0E-06 TCTCTCTGGGGATAAATAAGGATCTGTTG 29 V_OCT1_07_M00248 TRANSFAC + 47526365 47526376 9.0E-06 ACCATTTAAATT 12 V_OCT1_07_M00248 TRANSFAC - 47526373 47526384 4.0E-06 ATTATTTAAATT 12 V_SRF_06_M02916 TRANSFAC - 47528063 47528079 1.0E-06 AAAAAAAAAAAAAGCAA 17 V_SRF_06_M02916 TRANSFAC - 47528064 47528080 0.0E+00 AAAAAAAAAAAAAAGCA 17 V_SRF_06_M02916 TRANSFAC - 47528065 47528081 1.0E-06 AAAAAAAAAAAAAAAGC 17 V_SRF_06_M02916 TRANSFAC - 47528066 47528082 1.0E-06 AAAAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC - 47528067 47528083 0.0E+00 AAAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 47528068 47528084 0.0E+00 CAAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 47528069 47528085 0.0E+00 TCAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 47528070 47528086 0.0E+00 TTCAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 47528071 47528087 0.0E+00 TTTCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 47528072 47528088 0.0E+00 GTTTCAAAAAAAAAAAA 17 V_MOX1_01_M01443 TRANSFAC + 47526397 47526412 7.0E-06 GCGGTAATTAGGCGAA 16 V_PIT1_Q6_M00802 TRANSFAC - 47521652 47521669 1.0E-05 GATCCTTATTTATCCCCA 18 V_HOXA7_03_M01394 TRANSFAC + 47526397 47526412 8.0E-06 GCGGTAATTAGGCGAA 16 V_MAFK_04_M02880 TRANSFAC - 47528061 47528075 4.0E-06 AAAAAAAAAGCAATA 15 V_SP1_Q4_01_M00932 TRANSFAC - 47523045 47523057 5.0E-06 CGGGGGCGGGGTC 13 V_OBOX5_01_M01381 TRANSFAC - 47526375 47526391 2.0E-06 AAGCCGGATTATTTAAA 17 V_TCF3_05_M02920 TRANSFAC - 47528073 47528087 3.0E-06 TTTCAAAAAAAAAAA 15 V_OBOX6_06_M03067 TRANSFAC + 47526375 47526391 2.0E-06 TTTAAATAATCCGGCTT 17 V_NANOG_02_M01247 TRANSFAC - 47528061 47528080 5.0E-06 AAAAAAAAAAAAAAGCAATA 20 V_NANOG_02_M01247 TRANSFAC - 47528064 47528083 4.0E-06 AAAAAAAAAAAAAAAAAGCA 20 V_NANOG_02_M01247 TRANSFAC - 47528066 47528085 5.0E-06 TCAAAAAAAAAAAAAAAAAG 20 V_NANOG_02_M01247 TRANSFAC - 47528067 47528086 3.0E-06 TTCAAAAAAAAAAAAAAAAA 20 V_NANOG_02_M01247 TRANSFAC - 47528068 47528087 2.0E-06 TTTCAAAAAAAAAAAAAAAA 20 V_NANOG_02_M01247 TRANSFAC - 47528069 47528088 9.0E-06 GTTTCAAAAAAAAAAAAAAA 20 V_NKX21_01_M01312 TRANSFAC - 47525689 47525704 6.0E-06 TTTCCCACTTCACATT 16 V_OCT4_01_M01125 TRANSFAC + 47526367 47526381 1.0E-06 CATTTAAATTTAAAT 15 V_OCT4_01_M01125 TRANSFAC - 47526368 47526382 1.0E-06 TATTTAAATTTAAAT 15 V_OTX3_01_M01403 TRANSFAC - 47526376 47526392 4.0E-06 GAAGCCGGATTATTTAA 17

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