Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NME1-NME2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4831 NME/NM23 nucleoside diphosphate kinase 2 chr17 + 49237795 - 49244582 49244082 Transcription Factor Binding Sites   Download all TFBS in the NME1-NME2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HINFP1_C2H2_full_dimeric_19_1 SELEX - 49244010 49244028 8.0E-06 GCGGAGCCCGAAGGCCCGC 19 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 49247059 49247066 5.0E-06 ATAAACAA 8 NF-kappaB_MA0061.1 JASPAR - 49247085 49247094 6.0E-06 GGGACTTCCC 10 ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX - 49243793 49243804 6.0E-06 TGCGACCACCAC 12 FOXF2_MA0030.1 JASPAR - 49247058 49247071 3.0E-06 CAGAGATAAACAAT 14 ZBTB7B_C2H2_full_monomeric_12_1 SELEX - 49243792 49243803 7.0E-06 GCGACCACCACA 12 EWSR1-FLI1_MA0149.1 JASPAR + 49243315 49243332 6.0E-06 GAGGGGAGGGAAGGCTGG 18 Pax4_MA0068.1 JASPAR - 49244738 49244767 4.0E-06 AATTTAATGTGGAAAATACACTCACTACCC 30 SP1_MA0079.2 JASPAR + 49243766 49243775 9.0E-06 CCCCTCCTCC 10 SRY_MA0084.1 JASPAR - 49247058 49247066 5.0E-06 ATAAACAAT 9 Mycn_MA0104.2 JASPAR + 49244120 49244129 8.0E-06 CCCACGTGGC 10 TBX15_TBX_DBD_dimeric_19_1 SELEX + 49243789 49243807 6.0E-06 GGGTGTGGTGGTCGCACCA 19 ERF_ETS_DBD_monomeric_10_1 SELEX - 49243602 49243611 9.0E-06 ACAGGAAGTG 10 ZBTB7C_C2H2_full_monomeric_12_1 SELEX - 49243792 49243803 4.0E-06 GCGACCACCACA 12 ETS1_ETS_full_dimeric_18_1 SELEX + 49243594 49243611 3.0E-06 GAAGGAATCACTTCCTGT 18 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 49247059 49247066 5.0E-06 ATAAACAA 8 NFIA_NFI_full_monomeric_10_1 SELEX - 49239577 49239586 9.0E-06 AGTGCCAAGA 10 ZIC1_C2H2_full_monomeric_14_1 SELEX - 49244582 49244595 6.0E-06 GCCCCCCTGCGGCG 14 V_DMRT4_01_M01149 TRANSFAC - 49247048 49247060 3.0E-06 AATGTTGCAGAAT 13 V_FOXP1_01_M00987 TRANSFAC + 49243474 49243493 4.0E-06 TTCTGTGTGTGTGTGTGTGT 20 V_NFKB_C_M00208 TRANSFAC - 49243983 49243994 8.0E-06 AGGGAATCTCCC 12 V_NFKB_C_M00208 TRANSFAC - 49247084 49247095 0.0E+00 GGGGACTTCCCA 12 V_E2A_Q6_01_M02088 TRANSFAC - 49243426 49243438 3.0E-06 GGCCATCTGCTGC 13 V_NFKB_Q6_01_M00774 TRANSFAC + 49247080 49247095 7.0E-06 AAACTGGGAAGTCCCC 16 V_FLI1_Q6_M01208 TRANSFAC - 49243600 49243610 0.0E+00 CAGGAAGTGAT 11 V_BTEB3_Q5_M01865 TRANSFAC - 49243888 49243900 3.0E-06 GAACGGGAGGAGT 13 V_NF1_Q6_01_M00806 TRANSFAC - 49239577 49239593 1.0E-06 ATAGCTCAGTGCCAAGA 17 V_ZFX_01_M01593 TRANSFAC - 49244239 49244254 7.0E-06 CACCAGGCCGCGCTGC 16 V_ERR3_Q2_01_M02094 TRANSFAC + 49243388 49243400 9.0E-06 AGTCAAGGTTAAT 13 V_LRH1_Q5_01_M02098 TRANSFAC - 49243434 49243444 6.0E-06 GGTCAAGGCCA 11 V_ETS_B_M00340 TRANSFAC - 49243599 49243612 0.0E+00 GACAGGAAGTGATT 14 V_SPIB_02_M02041 TRANSFAC + 49243522 49243531 9.0E-06 ACGGGAAGTA 10 V_EBOX_Q6_01_M01034 TRANSFAC + 49244071 49244080 8.0E-06 CCACGTGTCC 10 V_NFMUE1_Q6_M00651 TRANSFAC - 49243218 49243226 6.0E-06 CGGCCATCT 9 V_P50P50_Q3_M01223 TRANSFAC - 49243983 49243995 1.0E-06 AAGGGAATCTCCC 13 V_SP1_03_M02281 TRANSFAC + 49243766 49243775 9.0E-06 CCCCTCCTCC 10 V_P50RELAP65_Q5_01_M01224 TRANSFAC + 49247086 49247097 5.0E-06 GGAAGTCCCCAA 12 V_CMYC_02_M01154 TRANSFAC + 49244119 49244130 9.0E-06 GCCCACGTGGCC 12 V_FOXP3_01_M01599 TRANSFAC - 49247059 49247066 5.0E-06 ATAAACAA 8 V_ETS_Q4_M00771 TRANSFAC + 49243599 49243610 0.0E+00 AATCACTTCCTG 12 V_RXRA_03_M02791 TRANSFAC - 49243511 49243527 1.0E-06 TCCCGTGACCCCAAAAG 17 V_ZBP89_Q4_M01816 TRANSFAC - 49244097 49244106 2.0E-06 TCCTCCCCCA 10 V_NFKB_Q6_M00194 TRANSFAC - 49243982 49243995 7.0E-06 AAGGGAATCTCCCG 14 V_NFKB_Q6_M00194 TRANSFAC - 49247083 49247096 4.0E-06 TGGGGACTTCCCAG 14 V_EGR1_04_M02848 TRANSFAC + 49243540 49243555 0.0E+00 TGAGGAGTGGGATTTG 16 V_TAL1BETAE47_01_M00065 TRANSFAC + 49243212 49243227 7.0E-06 AGGACCAGATGGCCGT 16 V_TEL2_Q6_M00678 TRANSFAC + 49243601 49243610 4.0E-06 TCACTTCCTG 10 V_CETS1P54_01_M00032 TRANSFAC - 49243602 49243611 9.0E-06 ACAGGAAGTG 10 V_SMAD4_Q6_M00733 TRANSFAC - 49243158 49243172 6.0E-06 GGCGTTCAGACTCCT 15 V_MYCN_01_M02259 TRANSFAC + 49244120 49244129 8.0E-06 CCCACGTGGC 10 V_SP3_Q3_M00665 TRANSFAC + 49243311 49243324 9.0E-06 AGCAGAGGGGAGGG 14 V_CETS1P54_03_M01078 TRANSFAC - 49243599 49243614 6.0E-06 GAGACAGGAAGTGATT 16 V_SF1_Q6_01_M01132 TRANSFAC - 49243390 49243398 9.0E-06 TAACCTTGA 9 V_FREAC2_01_M00290 TRANSFAC - 49247056 49247071 7.0E-06 CAGAGATAAACAATGT 16 V_GCNF_01_M00526 TRANSFAC + 49243383 49243400 7.0E-06 AGCCAAGTCAAGGTTAAT 18 V_GABPBETA_Q3_M01876 TRANSFAC - 49243601 49243611 1.0E-06 ACAGGAAGTGA 11 V_IPF1_05_M01255 TRANSFAC + 49244756 49244767 7.0E-06 CCACATTAAATT 12 V_MYOGNF1_01_M00056 TRANSFAC + 49243602 49243630 4.0E-06 CACTTCCTGTCTCTGGATCCGTCTCGATC 29 V_ESRRA_04_M02852 TRANSFAC + 49243511 49243527 9.0E-06 CTTTTGGGGTCACGGGA 17 V_FPM315_01_M01587 TRANSFAC + 49244098 49244109 1.0E-06 GGGGGAGGAGGG 12 V_ETS1_B_M00339 TRANSFAC - 49243597 49243611 0.0E+00 ACAGGAAGTGATTCC 15 V_ZFP281_01_M01597 TRANSFAC + 49244097 49244107 9.0E-06 TGGGGGAGGAG 11 V_NFKAPPAB_01_M00054 TRANSFAC - 49247085 49247094 7.0E-06 GGGACTTCCC 10 V_EWSR1FLI1_01_M02252 TRANSFAC + 49243315 49243332 6.0E-06 GAGGGGAGGGAAGGCTGG 18 V_FOXJ2_01_M00422 TRANSFAC - 49247055 49247072 8.0E-06 ACAGAGATAAACAATGTT 18 V_FOXO1_01_M00473 TRANSFAC - 49247058 49247067 9.0E-06 GATAAACAAT 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 49243765 49243778 2.0E-06 GGCGGAGGAGGGGC 14 V_DMRT1_01_M01146 TRANSFAC + 49247051 49247065 0.0E+00 CTGCAACATTGTTTA 15 V_FOXK1_03_M02752 TRANSFAC - 49247055 49247071 4.0E-06 CAGAGATAAACAATGTT 17 V_NF1_Q6_M00193 TRANSFAC + 49239577 49239594 7.0E-06 TCTTGGCACTGAGCTATT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.