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NKX6-1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 4825 NK6 homeobox 1 chr4 - 85418887 - 85424387 85419387 V_NKX61_03_M01489 V_NKX61_01_M00424 V_NKX61_02_M01469 Transcription Factor Binding Sites   Download all TFBS in the NKX6-1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX + 85420169 85420179 4.0E-06 TAAGTGTGAAA 11 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 85420441 85420449 1.0E-06 GTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 85420441 85420450 2.0E-06 GTAATAAAAC 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 85420441 85420450 9.0E-06 GTAATAAAAC 10 HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 85421015 85421025 6.0E-06 CCTTGTAAAAT 11 TBR1_TBX_DBD_monomeric_10_1 SELEX + 85420170 85420179 2.0E-06 AAGTGTGAAA 10 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 85415121 85415134 3.0E-06 AAATTAAGAAATTT 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 85415121 85415134 9.0E-06 AAATTTCTTAATTT 14 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 85420806 85420823 3.0E-06 TTTATTTAGCACAATTAA 18 RFX4_RFX_DBD_dimeric_16_1 SELEX - 85414918 85414933 1.0E-06 CATCGCTATGGCAACG 16 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 85420807 85420821 2.0E-06 TAATTGTGCTAAATA 15 HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 85421015 85421025 5.0E-06 CCTTGTAAAAT 11 BARX1_homeodomain_DBD_monomeric_8_1 SELEX - 85420806 85420813 5.0E-06 ACAATTAA 8 NFYA_MA0060.1 JASPAR - 85420659 85420674 0.0E+00 CTCAGCCAATCAGAGG 16 IRF7_IRF_DBD_trimeric_17_1 SELEX + 85414981 85414997 9.0E-06 AAAACAAAACTCGGAAA 17 IRF1_MA0050.1 JASPAR + 85414980 85414991 7.0E-06 AAAAACAAAACT 12 IRF1_MA0050.1 JASPAR + 85419745 85419756 9.0E-06 CAAAACAAAACC 12 EOMES_TBX_DBD_monomeric_13_1 SELEX + 85420169 85420181 2.0E-06 TAAGTGTGAAAAG 13 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 85420440 85420449 1.0E-06 GGTAATAAAA 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 85414918 85414933 1.0E-06 CGTTGCCATAGCGATG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 85414918 85414933 6.0E-06 CATCGCTATGGCAACG 16 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 85420441 85420449 1.0E-06 GTAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 85420441 85420450 5.0E-06 GTAATAAAAC 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 85420440 85420450 2.0E-06 GGTAATAAAAC 11 SP1_MA0079.2 JASPAR - 85417524 85417533 3.0E-06 CCCCTCCCCC 10 TBR1_TBX_full_monomeric_11_1 SELEX + 85420169 85420179 4.0E-06 TAAGTGTGAAA 11 SP4_C2H2_full_monomeric_17_1 SELEX - 85420732 85420748 3.0E-06 CTGGCCCCGCCCACAGG 17 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 85420673 85420689 5.0E-06 CTACGCCTGGCCCGCCT 17 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 85419881 85419892 9.0E-06 TAAGATCAGAGG 12 SP1_C2H2_DBD_monomeric_11_1 SELEX - 85420735 85420745 1.0E-05 GCCCCGCCCAC 11 MZF1_5-13_MA0057.1 JASPAR + 85420493 85420502 4.0E-06 GGAGGGGGAA 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 85420441 85420450 1.0E-05 GTAATAAAAC 10 RFX2_RFX_DBD_dimeric_16_1 SELEX + 85414918 85414933 2.0E-06 CGTTGCCATAGCGATG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 85414918 85414933 2.0E-06 CATCGCTATGGCAACG 16 TBX21_TBX_full_monomeric_10_1 SELEX + 85420169 85420178 8.0E-06 TAAGTGTGAA 10 RFX5_RFX_DBD_dimeric_16_3 SELEX + 85414918 85414933 2.0E-06 CGTTGCCATAGCGATG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 85414918 85414933 4.0E-06 CATCGCTATGGCAACG 16 TBX2_TBX_full_monomeric_11_1 SELEX + 85420169 85420179 3.0E-06 TAAGTGTGAAA 11 Foxd3_MA0041.1 JASPAR - 85420443 85420454 3.0E-06 AAATGTTTTATT 12 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 85417299 85417307 8.0E-06 CCCATTAAA 9 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 85420806 85420822 3.0E-06 TTAATTGTGCTAAATAA 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 85420806 85420822 4.0E-06 TTATTTAGCACAATTAA 17 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 85421015 85421025 5.0E-06 CCTTGTAAAAT 11 Pou5f1_MA0142.1 JASPAR - 85419740 85419754 3.0E-06 TTTTGTTTTGCTTAT 15 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 85421015 85421025 7.0E-06 CCTTGTAAAAT 11 TBX20_TBX_DBD_monomeric_15_1 SELEX + 85420166 85420180 4.0E-06 GACTAAGTGTGAAAA 15 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 85420441 85420450 8.0E-06 GTAATAAAAC 10 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 85415121 85415134 8.0E-06 AAATTAAGAAATTT 14 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 85420440 85420450 1.0E-06 GGTAATAAAAC 11 Sox2_MA0143.1 JASPAR - 85419741 85419755 6.0E-06 GTTTTGTTTTGCTTA 15 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 85420441 85420449 1.0E-06 GTAATAAAA 9 TBX1_TBX_DBD_dimeric_20_1 SELEX + 85420810 85420829 3.0E-06 TTGTGCTAAATAAAATGAGA 20 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 85420441 85420449 1.0E-06 GTAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 85420440 85420450 1.0E-06 GGTAATAAAAC 11 V_HOXA9_01_M01351 TRANSFAC - 85417302 85417318 4.0E-06 GCAGTCGTTAATTTAAT 17 V_HOXA9_01_M01351 TRANSFAC + 85420438 85420454 2.0E-06 AAGGTAATAAAACATTT 17 V_MEQ_01_M02049 TRANSFAC + 85418450 85418458 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC - 85414987 85415006 6.0E-06 ATTTTTAAGTTTCCGAGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 85420148 85420167 9.0E-06 TCTTTTGTTTTTCTGTGTTT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC - 85420572 85420582 6.0E-06 CGCCCCCGGCC 11 V_TCF3_01_M01594 TRANSFAC - 85419743 85419755 2.0E-06 GTTTTGTTTTGCT 13 V_TCF3_01_M01594 TRANSFAC - 85420154 85420166 1.0E-06 CTTTTGTTTTTCT 13 V_FXR_Q3_M00631 TRANSFAC - 85417673 85417686 6.0E-06 GAGCGGCAGTAACT 14 V_ZFX_01_M01593 TRANSFAC + 85420567 85420582 9.0E-06 GCGCAGGCCGGGGGCG 16 V_HMGIY_Q3_M01010 TRANSFAC - 85415124 85415138 2.0E-06 TTTGAAATTTCTTAA 15 V_FOXD3_01_M00130 TRANSFAC - 85420443 85420454 2.0E-06 AAATGTTTTATT 12 V_FOXO4_02_M00476 TRANSFAC - 85420153 85420166 1.0E-05 CTTTTGTTTTTCTG 14 V_POU5F1_02_M02245 TRANSFAC - 85419740 85419754 3.0E-06 TTTTGTTTTGCTTAT 15 V_MEF2_02_M00231 TRANSFAC + 85415111 85415132 7.0E-06 TTACTTTCTTAAATTAAGAAAT 22 V_EOMES_03_M02747 TRANSFAC + 85420166 85420182 2.0E-06 GACTAAGTGTGAAAAGT 17 V_TBR2_01_M01774 TRANSFAC + 85420170 85420178 1.0E-05 AAGTGTGAA 9 V_SRY_02_M00160 TRANSFAC + 85420156 85420167 1.0E-06 AAAAACAAAAGA 12 V_FOXO3A_Q1_M01137 TRANSFAC + 85414979 85414990 6.0E-06 TAAAAACAAAAC 12 V_MAF_Q6_M00648 TRANSFAC + 85420494 85420509 9.0E-06 GAGGGGGAAGTGGGGG 16 V_SP1_03_M02281 TRANSFAC - 85417524 85417533 3.0E-06 CCCCTCCCCC 10 V_LHX3_01_M01471 TRANSFAC + 85415925 85415941 1.0E-05 CTACTTAATTTAAGAAG 17 V_PRX2_Q2_M02115 TRANSFAC + 85415119 85415127 2.0E-06 TTAAATTAA 9 V_PRX2_Q2_M02115 TRANSFAC - 85415929 85415937 2.0E-06 TTAAATTAA 9 V_PRX2_Q2_M02115 TRANSFAC + 85417303 85417311 2.0E-06 TTAAATTAA 9 V_HOXD13_01_M01404 TRANSFAC + 85420438 85420453 9.0E-06 AAGGTAATAAAACATT 16 V_AP4_Q6_01_M00927 TRANSFAC + 85414518 85414526 1.0E-05 AACAGCTGC 9 V_NFY_Q6_01_M00775 TRANSFAC - 85420663 85420675 1.0E-06 CCTCAGCCAATCA 13 V_ALX4_02_M01417 TRANSFAC + 85420798 85420814 7.0E-06 CGCCTCAATTAATTGTG 17 V_CEBPB_01_M00109 TRANSFAC + 85415121 85415134 0.0E+00 AAATTAAGAAATTT 14 V_CART1_03_M01453 TRANSFAC + 85420798 85420814 8.0E-06 CGCCTCAATTAATTGTG 17 V_BCL6_02_M01185 TRANSFAC + 85415112 85415125 2.0E-06 TACTTTCTTAAATT 14 V_NFY_C_M00209 TRANSFAC + 85420661 85420674 9.0E-06 TCTGATTGGCTGAG 14 V_SOX13_03_M02797 TRANSFAC - 85420804 85420819 1.0E-06 TTTAGCACAATTAATT 16 V_SOX7_03_M02807 TRANSFAC + 85420152 85420173 4.0E-06 ACAGAAAAACAAAAGACTAAGT 22 V_TGIF_02_M01346 TRANSFAC - 85418583 85418599 3.0E-06 TAGTTTGACAGCGCCGG 17 V_DBX2_01_M01360 TRANSFAC - 85420799 85420814 1.0E-05 CACAATTAATTGAGGC 16 V_CEBPE_Q6_M01868 TRANSFAC - 85415123 85415136 0.0E+00 TGAAATTTCTTAAT 14 V_BEL1_B_M00312 TRANSFAC + 85415137 85415164 9.0E-06 AACAACCTGACACGTACTTGCTTTTCGG 28 V_HOXB13_01_M01467 TRANSFAC + 85420438 85420453 8.0E-06 AAGGTAATAAAACATT 16 V_TEF_Q6_M00672 TRANSFAC + 85414931 85414942 3.0E-06 ATGGTAACACAA 12 V_CEBPD_Q6_M00621 TRANSFAC - 85415122 85415133 1.0E-06 AATTTCTTAATT 12 V_HOXB9_01_M01426 TRANSFAC + 85420438 85420453 2.0E-06 AAGGTAATAAAACATT 16 V_SP1_Q6_M00196 TRANSFAC + 85420734 85420746 5.0E-06 TGTGGGCGGGGCC 13 V_IRF3_Q3_M01279 TRANSFAC - 85419741 85419753 4.0E-06 TTTGTTTTGCTTA 13 V_CDX2_01_M01449 TRANSFAC + 85420437 85420452 0.0E+00 AAAGGTAATAAAACAT 16 V_CDX2_Q5_M00729 TRANSFAC - 85420440 85420453 0.0E+00 AATGTTTTATTACC 14 V_SOX18_03_M02801 TRANSFAC + 85420805 85420820 7.0E-06 ATTAATTGTGCTAAAT 16 V_GADP_01_M01258 TRANSFAC - 85419452 85419463 3.0E-06 CGCTTCCGGCTC 12 V_CDX1_01_M01373 TRANSFAC + 85420437 85420452 0.0E+00 AAAGGTAATAAAACAT 16 V_OCT1_04_M00138 TRANSFAC + 85420804 85420826 8.0E-06 AATTAATTGTGCTAAATAAAATG 23 V_UNCX4.1_01_M01458 TRANSFAC - 85420798 85420814 1.0E-06 CACAATTAATTGAGGCG 17 V_ZBRK1_01_M01105 TRANSFAC + 85417531 85417545 3.0E-06 GGGGCACAGCCTTTG 15 V_OTP_01_M01323 TRANSFAC - 85420798 85420814 6.0E-06 CACAATTAATTGAGGCG 17 V_HOXA11_01_M01378 TRANSFAC + 85420437 85420452 4.0E-06 AAAGGTAATAAAACAT 16 V_PMX2B_01_M01356 TRANSFAC - 85420798 85420814 3.0E-06 CACAATTAATTGAGGCG 17 V_TGIF1_01_M03111 TRANSFAC - 85418583 85418599 3.0E-06 TAGTTTGACAGCGCCGG 17 V_LHX3b_01_M01971 TRANSFAC - 85420802 85420811 7.0E-06 AATTAATTGA 10 V_SOX11_03_M02795 TRANSFAC + 85420154 85420170 0.0E+00 AGAAAAACAAAAGACTA 17 V_NKX63_01_M01470 TRANSFAC - 85420798 85420814 9.0E-06 CACAATTAATTGAGGCG 17 V_FOXO1_Q5_M01216 TRANSFAC + 85419745 85419753 8.0E-06 CAAAACAAA 9 V_TFIII_Q6_M00706 TRANSFAC + 85418495 85418503 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC - 85420735 85420745 9.0E-06 GCCCCGCCCAC 11 V_CAAT_01_M00254 TRANSFAC - 85420663 85420674 2.0E-06 CTCAGCCAATCA 12 V_SHOX2_01_M01415 TRANSFAC + 85420798 85420814 5.0E-06 CGCCTCAATTAATTGTG 17 V_SOX15_03_M02799 TRANSFAC - 85420803 85420819 6.0E-06 TTTAGCACAATTAATTG 17 V_ALPHACP1_01_M00687 TRANSFAC - 85420662 85420672 1.0E-06 CAGCCAATCAG 11 V_MTF1_06_M02882 TRANSFAC + 85415122 85415135 8.0E-06 AATTAAGAAATTTC 14 V_MTF1_06_M02882 TRANSFAC + 85419738 85419751 2.0E-06 AAATAAGCAAAACA 14 V_NFYC_Q5_M02107 TRANSFAC - 85420659 85420672 0.0E+00 CAGCCAATCAGAGG 14 V_CEBPA_01_M00116 TRANSFAC + 85417263 85417276 6.0E-06 CTATTGCTAAAGTT 14 V_CNOT3_01_M01253 TRANSFAC + 85420690 85420699 8.0E-06 GGCCGCGCCC 10 V_FOXL1_02_M02857 TRANSFAC + 85414976 85414991 5.0E-06 AAGTAAAAACAAAACT 16 V_FOXL1_02_M02857 TRANSFAC + 85419741 85419756 0.0E+00 TAAGCAAAACAAAACC 16 V_FOXL1_04_M02753 TRANSFAC + 85414975 85414991 7.0E-06 AAAGTAAAAACAAAACT 17 V_FOXJ3_06_M02855 TRANSFAC + 85419740 85419756 1.0E-06 ATAAGCAAAACAAAACC 17 V_NKX61_02_M01469 TRANSFAC + 85420801 85420816 9.0E-06 CTCAATTAATTGTGCT 16 V_NFY_01_M00287 TRANSFAC - 85420659 85420674 0.0E+00 CTCAGCCAATCAGAGG 16 V_ALX4_03_M02944 TRANSFAC + 85420798 85420814 7.0E-06 CGCCTCAATTAATTGTG 17 V_ZFP281_01_M01597 TRANSFAC + 85417523 85417533 3.0E-06 AGGGGGAGGGG 11 V_BBX_03_M02739 TRANSFAC + 85415926 85415940 5.0E-06 TACTTAATTTAAGAA 15 V_BBX_03_M02739 TRANSFAC - 85415926 85415940 8.0E-06 TTCTTAAATTAAGTA 15 V_TCFAP2B_04_M02924 TRANSFAC + 85417864 85417878 9.0E-06 TTTGCCTCAAGCAAG 15 V_SOX8_03_M02808 TRANSFAC + 85420803 85420819 3.0E-06 CAATTAATTGTGCTAAA 17 V_TCFAP2A_03_M02819 TRANSFAC + 85417864 85417878 7.0E-06 TTTGCCTCAAGCAAG 15 V_SOX2_01_M02246 TRANSFAC - 85419741 85419755 6.0E-06 GTTTTGTTTTGCTTA 15 V_ZFP281_04_M02831 TRANSFAC - 85417521 85417535 4.0E-06 GCCCCCTCCCCCTTC 15 V_SOX18_04_M02905 TRANSFAC - 85415116 85415131 7.0E-06 TTTCTTAATTTAAGAA 16 V_SOX18_04_M02905 TRANSFAC + 85415925 85415940 5.0E-06 CTACTTAATTTAAGAA 16 V_SOX4_01_M01308 TRANSFAC - 85417540 85417547 1.0E-05 AACAAAGG 8 V_RFX3_05_M02892 TRANSFAC + 85418499 85418521 9.0E-06 GGAGGCGCTTGGATACAGCCACG 23 V_YY1_01_M00059 TRANSFAC - 85421016 85421032 2.0E-06 TAGCTCCATTTTACAAG 17 V_SOX2_Q6_M01272 TRANSFAC - 85420155 85420170 2.0E-06 TAGTCTTTTGTTTTTC 16 V_IRF1_01_M00062 TRANSFAC + 85414979 85414991 5.0E-06 TAAAAACAAAACT 13 V_IRF1_01_M00062 TRANSFAC + 85420155 85420167 6.0E-06 GAAAAACAAAAGA 13 V_SOX12_03_M02796 TRANSFAC + 85420807 85420820 9.0E-06 TAATTGTGCTAAAT 14 V_PIT1_Q6_M00802 TRANSFAC + 85415920 85415937 5.0E-06 TATTCCTACTTAATTTAA 18 V_FOXO4_01_M00472 TRANSFAC + 85414980 85414990 1.0E-05 AAAAACAAAAC 11 V_CEBP_Q2_01_M00912 TRANSFAC - 85415121 85415132 3.0E-06 ATTTCTTAATTT 12 V_HOXA10_01_M01464 TRANSFAC + 85420438 85420453 0.0E+00 AAGGTAATAAAACATT 16 V_OG2_02_M01441 TRANSFAC + 85420798 85420814 8.0E-06 CGCCTCAATTAATTGTG 17 V_NFYA_Q5_M02106 TRANSFAC - 85420659 85420672 0.0E+00 CAGCCAATCAGAGG 14 V_SP1_Q4_01_M00932 TRANSFAC + 85420734 85420746 4.0E-06 TGTGGGCGGGGCC 13 V_HOXD10_01_M01375 TRANSFAC + 85420438 85420454 0.0E+00 AAGGTAATAAAACATTT 17 V_SOX5_04_M02910 TRANSFAC - 85415117 85415131 3.0E-06 TTTCTTAATTTAAGA 15 V_SMAD1_01_M01590 TRANSFAC + 85420156 85420167 0.0E+00 AAAAACAAAAGA 12 V_RFX1_02_M00281 TRANSFAC + 85414923 85414940 9.0E-06 CCATAGCGATGGTAACAC 18 V_CEBPA_Q6_M01866 TRANSFAC - 85417264 85417276 3.0E-06 AACTTTAGCAATA 13 V_NANOG_02_M01247 TRANSFAC + 85419741 85419760 4.0E-06 TAAGCAAAACAAAACCCAGG 20 V_NANOG_02_M01247 TRANSFAC + 85420152 85420171 0.0E+00 ACAGAAAAACAAAAGACTAA 20 V_HOXC9_01_M01416 TRANSFAC + 85420437 85420452 1.0E-06 AAAGGTAATAAAACAT 16 V_OCT4_01_M01125 TRANSFAC - 85419740 85419754 5.0E-06 TTTTGTTTTGCTTAT 15

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