Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NFRKB


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
4798 nuclear factor related to kappaB binding protein chr11 -129762404 - 129770490 129762904

Transcription Factor Binding Sites

 
Download all TFBS in the NFRKB promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
POU3F3_POU_DBD_monomeric_12_1 SELEX + 129764616 129764627 8.0E-06 ATGCCTAAATAA 12
RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 129764564 129764581 5.0E-06 AAGGGTGATGAGGGGGCA 18
GLI2_C2H2_DBD_monomeric_14_1 SELEX - 129764538 129764551 5.0E-06 GACCACCCACGTGA 14
HMX3_homeodomain_DBD_monomeric_11_1 SELEX + 129758634 129758644 7.0E-06 ATCACTTAACA 11
SP1_MA0079.2 JASPAR + 129765209 129765218 3.0E-06 CCCCTCCCCC 10
HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 129758634 129758644 7.0E-06 ATCACTTAACA 11
Mafb_bZIP_DBD_dimeric_18_1 SELEX + 129765754 129765771 2.0E-06 TTAGCTGACGTTTGCAGA 18
Mafb_bZIP_DBD_dimeric_18_1 SELEX - 129765754 129765771 5.0E-06 TCTGCAAACGTCAGCTAA 18
Zfx_MA0146.1 JASPAR + 129765522 129765535 8.0E-06 CGGGGCGGGGCCTG 14
V_GAF_Q6_M01209 TRANSFAC + 129765134 129765144 9.0E-06 CAAATTCCCCT 11
V_FOXP3_Q4_M00992 TRANSFAC - 129764714 129764730 3.0E-06 GAAGGTTTTATTCTGAG 17
V_MAX_Q6_M01830 TRANSFAC - 129764538 129764549 1.0E-05 CCACCCACGTGA 12
V_ZFX_01_M01593 TRANSFAC - 129765523 129765538 6.0E-06 CTCCAGGCCCCGCCCC 16
V_ETS_B_M00340 TRANSFAC - 129758640 129758653 2.0E-06 GGCAGGAAGTGTTA 14
V_EBOX_Q6_01_M01034 TRANSFAC - 129764536 129764545 4.0E-06 CCACGTGACT 10
V_SP1_Q6_01_M00931 TRANSFAC - 129765203 129765212 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 129765508 129765517 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 129765523 129765532 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 129765545 129765554 4.0E-06 GGGGCGGGGC 10
V_GLI1_Q2_M01042 TRANSFAC - 129764542 129764551 4.0E-06 GACCACCCAC 10
V_GLI1_01_M01702 TRANSFAC - 129764541 129764551 0.0E+00 GACCACCCACG 11
V_SP1_03_M02281 TRANSFAC + 129765209 129765218 3.0E-06 CCCCTCCCCC 10
V_ETS_Q4_M00771 TRANSFAC + 129758640 129758651 7.0E-06 TAACACTTCCTG 12
V_GLI3_02_M01704 TRANSFAC - 129764541 129764551 1.0E-06 GACCACCCACG 11
V_GC_01_M00255 TRANSFAC - 129765201 129765214 4.0E-06 GAGGGGCGGGGCCG 14
V_GC_01_M00255 TRANSFAC + 129765506 129765519 4.0E-06 AAGGGGCGGGGCAG 14
V_ZIC3_01_M00450 TRANSFAC + 129764543 129764551 6.0E-06 TGGGTGGTC 9
V_ZBP89_Q4_M01816 TRANSFAC + 129765210 129765219 4.0E-06 CCCTCCCCCA 10
V_SP1_Q6_M00196 TRANSFAC - 129765202 129765214 1.0E-06 GAGGGGCGGGGCC 13
V_SP1_Q6_M00196 TRANSFAC + 129765506 129765518 9.0E-06 AAGGGGCGGGGCA 13
V_SP1_Q6_M00196 TRANSFAC + 129765521 129765533 4.0E-06 GCGGGGCGGGGCC 13
V_MAZ_Q6_01_M02023 TRANSFAC - 129765205 129765218 3.0E-06 GGGGGAGGGGCGGG 14
V_LXR_DR4_Q3_M00766 TRANSFAC + 129765382 129765397 8.0E-06 CGCCCTCACCTGAACC 16
V_NKX52_01_M01315 TRANSFAC + 129758631 129758647 3.0E-06 AGAATCACTTAACACTT 17
V_MEF2_04_M00233 TRANSFAC + 129764707 129764728 2.0E-06 CCTGATGCTCAGAATAAAACCT 22
V_TEL2_Q6_M00678 TRANSFAC + 129758642 129758651 8.0E-06 ACACTTCCTG 10
V_KLF7_03_M02773 TRANSFAC + 129765200 129765215 6.0E-06 TCGGCCCCGCCCCTCC 16
V_ZIC1_01_M00448 TRANSFAC + 129764543 129764551 6.0E-06 TGGGTGGTC 9
V_SP1_01_M00008 TRANSFAC - 129765778 129765787 7.0E-06 GGGGCAGGGT 10
V_GLI3_Q5_01_M01657 TRANSFAC + 129764542 129764550 6.0E-06 GTGGGTGGT 9
V_GLI3_01_M01596 TRANSFAC + 129764542 129764552 2.0E-06 GTGGGTGGTCC 11
V_SP4_Q5_M01273 TRANSFAC + 129765203 129765213 8.0E-06 GCCCCGCCCCT 11
V_SP4_Q5_M01273 TRANSFAC + 129765208 129765218 5.0E-06 GCCCCTCCCCC 11
V_SP4_Q5_M01273 TRANSFAC - 129765507 129765517 8.0E-06 GCCCCGCCCCT 11
V_SP4_Q5_M01273 TRANSFAC - 129765522 129765532 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC - 129765544 129765554 2.0E-06 GCCCCGCCCCG 11
V_USF_Q6_01_M00796 TRANSFAC - 129764536 129764547 5.0E-06 ACCCACGTGACT 12
V_GLI2_01_M01703 TRANSFAC - 129764541 129764551 1.0E-06 GACCACCCACG 11
V_NKX3A_02_M01383 TRANSFAC - 129765795 129765811 6.0E-06 TAGAAAGTGCTTAGCAT 17
V_DELTAEF1_01_M00073 TRANSFAC + 129765385 129765395 5.0E-06 CCTCACCTGAA 11
V_ETS1_B_M00339 TRANSFAC - 129758638 129758652 4.0E-06 GCAGGAAGTGTTAAG 15
V_ETS1_B_M00339 TRANSFAC - 129762602 129762616 4.0E-06 GGAGGATGTGAGTAG 15
V_ZFP281_01_M01597 TRANSFAC - 129765209 129765219 1.0E-06 TGGGGGAGGGG 11
V_GLI_Q2_M01037 TRANSFAC + 129764541 129764552 1.0E-06 CGTGGGTGGTCC 12
V_SP1_Q2_01_M00933 TRANSFAC + 129765204 129765213 7.0E-06 CCCCGCCCCT 10
V_SP1_Q2_01_M00933 TRANSFAC - 129765507 129765516 7.0E-06 CCCCGCCCCT 10
V_UF1H3BETA_Q6_M01068 TRANSFAC - 129765208 129765221 1.0E-06 CGTGGGGGAGGGGC 14
V_HMX3_02_M01413 TRANSFAC + 129758631 129758647 4.0E-06 AGAATCACTTAACACTT 17
V_LPOLYA_B_M00318 TRANSFAC + 129758148 129758155 7.0E-06 CAATAAAG 8
V_SP1_Q4_01_M00932 TRANSFAC - 129765202 129765214 2.0E-06 GAGGGGCGGGGCC 13
V_SP1_Q4_01_M00932 TRANSFAC + 129765506 129765518 3.0E-06 AAGGGGCGGGGCA 13
V_SP1_Q4_01_M00932 TRANSFAC + 129765521 129765533 6.0E-06 GCGGGGCGGGGCC 13
V_HOXD10_01_M01375 TRANSFAC + 129758144 129758160 5.0E-06 CGTGCAATAAAGCAAAT 17
V_TCF11MAFG_01_M00284 TRANSFAC - 129764520 129764541 1.0E-05 GTGACTTGACTCAACGCTTAAG 22
V_RNF96_01_M01199 TRANSFAC - 129765433 129765442 7.0E-06 GCCCGCGGCC 10
V_ZIC2_01_M00449 TRANSFAC + 129764543 129764551 6.0E-06 TGGGTGGTC 9
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL