Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NDUFV1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4723 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa chr11 + 67369322 - 67374822 67374322 Transcription Factor Binding Sites   Download all TFBS in the NDUFV1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints IRF7_IRF_DBD_dimeric_14_1 SELEX + 67373441 67373454 3.0E-06 AGGAAACTGAAAAA 14 FOXF2_MA0030.1 JASPAR - 67374119 67374132 2.0E-06 CACAAGTAAACAAA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 67374119 67374130 3.0E-06 CAAGTAAACAAA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 67374116 67374128 4.0E-06 AGTAAACAAACCT 13 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 67373267 67373278 5.0E-06 TATTTTCTCACA 12 ZNF435_C2H2_full_dimeric_18_1 SELEX - 67373286 67373303 2.0E-06 GCTGTTTACAAAACTCCT 18 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 67374120 67374127 7.0E-06 GTAAACAA 8 EBF1_MA0154.1 JASPAR - 67374619 67374628 5.0E-06 ACCCCAGGGA 10 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 67370285 67370297 9.0E-06 GACCAACAGGTTT 13 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 67374117 67374127 5.0E-06 GTAAACAAACC 11 CTCF_C2H2_full_monomeric_17_1 SELEX + 67374388 67374404 1.0E-06 CGCGCCACCTAGCGTCT 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 67374117 67374127 8.0E-06 GTAAACAAACC 11 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 67370285 67370299 6.0E-06 GACCAACAGGTTTGT 15 ZNF143_C2H2_DBD_monomeric_16_1 SELEX + 67374021 67374036 1.0E-06 CTCCCATGATACACCG 16 Foxd3_MA0041.1 JASPAR + 67374118 67374129 3.0E-06 GTTTGTTTACTT 12 Stat3_MA0144.1 JASPAR + 67373437 67373446 1.0E-06 TTCCAGGAAA 10 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 67373924 67373934 8.0E-06 CTTCCCCACCC 11 FOXB1_forkhead_full_monomeric_9_1 SELEX - 67374120 67374128 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 67374120 67374127 7.0E-06 GTAAACAA 8 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 67374117 67374129 1.0E-06 AAGTAAACAAACC 13 V_EBF_Q6_M00977 TRANSFAC + 67370179 67370189 4.0E-06 CTCCCTTGAGA 11 V_BTEB3_Q5_M01865 TRANSFAC - 67374017 67374029 3.0E-06 TCATGGGAGGAGT 13 V_FOXA2_04_M02749 TRANSFAC - 67374116 67374132 0.0E+00 CACAAGTAAACAAACCT 17 V_CEBP_Q3_M00770 TRANSFAC + 67373288 67373299 4.0E-06 GAGTTTTGTAAA 12 V_FOXD3_01_M00130 TRANSFAC + 67374118 67374129 4.0E-06 GTTTGTTTACTT 12 V_FOXO4_02_M00476 TRANSFAC + 67374117 67374130 2.0E-06 GGTTTGTTTACTTG 14 V_ZTA_Q2_M00711 TRANSFAC - 67371033 67371045 6.0E-06 TGACCCTGACACA 13 V_IRF_Q6_01_M00972 TRANSFAC + 67373443 67373453 2.0E-06 GAAACTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 67373441 67373456 2.0E-06 AGGAAACTGAAAAAGA 16 V_GATA1_03_M00127 TRANSFAC + 67373324 67373337 0.0E+00 AGGATGATTACAGC 14 V_EAR2_Q2_M01728 TRANSFAC - 67373487 67373500 3.0E-06 TGTCCTTTGCCTTC 14 V_STAT5B_01_M00459 TRANSFAC - 67373434 67373448 6.0E-06 AGTTTCCTGGAACCC 15 V_FOXJ1_03_M02750 TRANSFAC - 67374115 67374130 2.0E-06 CAAGTAAACAAACCTC 16 V_GC_01_M00255 TRANSFAC + 67374304 67374317 3.0E-06 AGGAGGCGGGGCCG 14 V_FREAC3_01_M00291 TRANSFAC - 67374117 67374132 1.0E-06 CACAAGTAAACAAACC 16 V_FOXO1_02_M00474 TRANSFAC + 67374117 67374130 1.0E-06 GGTTTGTTTACTTG 14 V_HIC1_06_M02867 TRANSFAC + 67370296 67370311 8.0E-06 TTGTATGCCCATATGT 16 V_SP1_Q6_M00196 TRANSFAC + 67374304 67374316 5.0E-06 AGGAGGCGGGGCC 13 V_HNF3A_01_M01261 TRANSFAC - 67374120 67374129 1.0E-06 AAGTAAACAA 10 V_HNF3_Q6_M00791 TRANSFAC - 67374119 67374131 6.0E-06 ACAAGTAAACAAA 13 V_IRF_Q6_M00772 TRANSFAC - 67373443 67373457 2.0E-06 GTCTTTTTCAGTTTC 15 V_EBF1_01_M02267 TRANSFAC - 67374619 67374628 5.0E-06 ACCCCAGGGA 10 V_HNF4_DR1_Q3_M00764 TRANSFAC - 67373488 67373500 8.0E-06 TGTCCTTTGCCTT 13 V_STAT4_Q5_M02117 TRANSFAC + 67373437 67373446 7.0E-06 TTCCAGGAAA 10 V_STAF_02_M00264 TRANSFAC + 67374254 67374274 8.0E-06 ATCTCCCAGAAGCCCCGGCGC 21 V_LMO2COM_01_M00277 TRANSFAC + 67374044 67374055 9.0E-06 CCGCAGGTGCAC 12 V_STAT3_03_M01595 TRANSFAC + 67373435 67373450 9.0E-06 GGTTCCAGGAAACTGA 16 V_IRF7_01_M00453 TRANSFAC + 67373440 67373457 4.0E-06 CAGGAAACTGAAAAAGAC 18 V_FREAC2_01_M00290 TRANSFAC - 67374117 67374132 1.0E-06 CACAAGTAAACAAACC 16 V_HFH8_01_M00294 TRANSFAC + 67374118 67374130 5.0E-06 GTTTGTTTACTTG 13 V_TAL1_01_M01591 TRANSFAC - 67373313 67373325 4.0E-06 CTTCCTGATCTCT 13 V_TCFE2A_03_M02823 TRANSFAC + 67374042 67374058 8.0E-06 TACCGCAGGTGCACACT 17 V_CNOT3_01_M01253 TRANSFAC + 67374597 67374606 8.0E-06 GGCCGCGCCC 10 V_FOXL1_04_M02753 TRANSFAC - 67374116 67374132 2.0E-06 CACAAGTAAACAAACCT 17 V_LUN1_01_M00480 TRANSFAC - 67373686 67373702 3.0E-06 TCCCTGCTGCTTTTGGA 17 V_FOX_Q2_M00809 TRANSFAC + 67374118 67374130 3.0E-06 GTTTGTTTACTTG 13 V_TBP_04_M02918 TRANSFAC - 67373656 67373670 8.0E-06 AGGATTTAAGGGCTC 15 V_ZFP281_01_M01597 TRANSFAC + 67370200 67370210 9.0E-06 TGGGGGTTGGG 11 V_LEF1TCF1_Q4_M00978 TRANSFAC - 67374132 67374142 5.0E-06 CCTTTGATGCC 11 V_IRF1_Q6_01_M01881 TRANSFAC - 67373442 67373455 1.0E-06 CTTTTTCAGTTTCC 14 V_STAT5A_01_M00457 TRANSFAC + 67373434 67373448 7.0E-06 GGGTTCCAGGAAACT 15 V_STAT5A_01_M00457 TRANSFAC - 67373434 67373448 5.0E-06 AGTTTCCTGGAACCC 15 V_HFH3_01_M00289 TRANSFAC + 67374118 67374130 8.0E-06 GTTTGTTTACTTG 13 V_FOXJ2_01_M00422 TRANSFAC - 67374116 67374133 5.0E-06 CCACAAGTAAACAAACCT 18 V_SOX18_04_M02905 TRANSFAC + 67370436 67370451 9.0E-06 GGACTGAATTTTTTAA 16 V_FOXO1_01_M00473 TRANSFAC - 67374119 67374128 3.0E-06 AGTAAACAAA 10 V_HNF3B_Q6_M02014 TRANSFAC + 67374120 67374128 2.0E-06 TTGTTTACT 9 V_FREAC4_01_M00292 TRANSFAC - 67374117 67374132 9.0E-06 CACAAGTAAACAAACC 16 V_FOXO4_01_M00472 TRANSFAC - 67374117 67374127 4.0E-06 GTAAACAAACC 11 V_ATF_B_M00338 TRANSFAC + 67374373 67374384 5.0E-06 GTGACGTCTTTC 12 V_STAT1_Q6_M01823 TRANSFAC + 67373437 67373446 2.0E-06 TTCCAGGAAA 10 V_STAT1_05_M01260 TRANSFAC + 67373434 67373455 7.0E-06 GGGTTCCAGGAAACTGAAAAAG 22 V_FOXK1_03_M02752 TRANSFAC - 67374116 67374132 2.0E-06 CACAAGTAAACAAACCT 17 V_NANOG_02_M01247 TRANSFAC + 67373330 67373349 1.0E-06 ATTACAGCACAAAAGAACAG 20 V_TCF4_01_M01705 TRANSFAC - 67374134 67374142 5.0E-06 CCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.