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NDUFA9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4704 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa chr12 + 4753263 - 4758763 4758263 Transcription Factor Binding Sites   Download all TFBS in the NDUFA9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Tp53_p53l_DBD_dimeric_18_1 SELEX - 4757988 4758005 5.0E-06 ACATGCAAAATGGCAAGA 18 IRF7_IRF_DBD_dimeric_14_1 SELEX - 4758491 4758504 8.0E-06 CGGAAAGCGAAAGG 14 ZNF713_C2H2_full_monomeric_17_1 SELEX - 4758146 4758162 4.0E-06 AAGAAGAAAGCTGGGAA 17 POU3F3_POU_DBD_monomeric_12_1 SELEX + 4757472 4757483 9.0E-06 TTGCATAATATT 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 4758058 4758069 2.0E-06 ATTATAAATAGC 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 4757774 4757785 5.0E-06 CAAGTAAATAAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 4757471 4757483 4.0E-06 TTTGCATAATATT 13 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 4758048 4758065 3.0E-06 GCAATTAGAGATTATAAA 18 FOXL1_forkhead_full_dimeric_13_1 SELEX - 4757771 4757783 4.0E-06 AGTAAATAAATGT 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 4757470 4757478 2.0E-06 TATGCAAAT 9 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 4758282 4758293 0.0E+00 TCTTTTCCCACA 12 POU3F4_POU_DBD_monomeric_11_1 SELEX + 4757473 4757483 9.0E-06 TGCATAATATT 11 HNF1B_MA0153.1 JASPAR + 4758016 4758027 5.0E-06 TCACTGGTTAAC 12 POU2F3_POU_DBD_monomeric_9_1 SELEX - 4757470 4757478 2.0E-06 TATGCAAAT 9 TBX19_TBX_DBD_dimeric_20_1 SELEX + 4758334 4758353 3.0E-06 AATGTCACGTAAGTGTTACC 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 4758334 4758353 4.0E-06 GGTAACACTTACGTGACATT 20 EWSR1-FLI1_MA0149.1 JASPAR - 4758114 4758131 6.0E-06 GGAAGAAAGGAAGTGAAA 18 EWSR1-FLI1_MA0149.1 JASPAR - 4758122 4758139 6.0E-06 GGAGAGGGGGAAGAAAGG 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 4757467 4757480 0.0E+00 ATTATGCAAATTTA 14 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 4758058 4758069 2.0E-06 ATTATAAATAGC 12 POU2F2_POU_DBD_monomeric_11_1 SELEX - 4757469 4757479 0.0E+00 TTATGCAAATT 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 4757470 4757478 2.0E-06 TATGCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 4757470 4757478 2.0E-06 TATGCAAAT 9 MEF2B_MADS_full_dimeric_12_1 SELEX + 4758058 4758069 2.0E-06 ATTATAAATAGC 12 IRF1_MA0050.1 JASPAR - 4758491 4758502 5.0E-06 GAAAGCGAAAGG 12 POU3F3_POU_DBD_monomeric_13_1 SELEX - 4757468 4757480 0.0E+00 ATTATGCAAATTT 13 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 4757772 4757782 7.0E-06 GTAAATAAATG 11 MEF2A_MA0052.1 JASPAR - 4758059 4758068 1.0E-06 CTATTTATAA 10 YY2_C2H2_full_monomeric_11_1 SELEX - 4758290 4758300 4.0E-06 GCCGCCATCTT 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 4757772 4757782 7.0E-06 GTAAATAAATG 11 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 4758274 4758289 1.0E-06 TTCCCACAATCCCCCA 16 POU3F1_POU_DBD_monomeric_12_1 SELEX - 4757468 4757479 0.0E+00 TTATGCAAATTT 12 T_TBX_full_dimeric_16_1 SELEX + 4758336 4758351 2.0E-06 TGTCACGTAAGTGTTA 16 T_TBX_full_dimeric_16_1 SELEX - 4758336 4758351 1.0E-06 TAACACTTACGTGACA 16 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 4758489 4758503 4.0E-06 GGAAAGCGAAAGGAG 15 POU3F1_POU_DBD_monomeric_12_2 SELEX + 4757472 4757483 9.0E-06 TTGCATAATATT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX - 4757469 4757480 0.0E+00 ATTATGCAAATT 12 IRF3_IRF_full_trimeric_21_1 SELEX + 4757940 4757960 8.0E-06 GGGAACAGGAAACTGAGAGTC 21 IRF3_IRF_full_trimeric_21_1 SELEX - 4758490 4758510 0.0E+00 GGGAAGCGGAAAGCGAAAGGA 21 POU3F2_POU_DBD_monomeric_12_1 SELEX - 4757468 4757479 0.0E+00 TTATGCAAATTT 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 4757772 4757784 0.0E+00 AAGTAAATAAATG 13 IRF2_MA0051.1 JASPAR - 4757922 4757939 1.0E-05 TGAAAATGTAAGCTAAGC 18 IRF2_MA0051.1 JASPAR - 4758486 4758503 0.0E+00 GGAAAGCGAAAGGAGAAA 18 V_TCF3_01_M01594 TRANSFAC + 4762467 4762479 8.0E-06 TCTTTGTCATTCT 13 V_POU3F3_01_M03090 TRANSFAC - 4757466 4757482 9.0E-06 ATATTATGCAAATTTAG 17 V_POU3F3_01_M03090 TRANSFAC + 4757467 4757483 0.0E+00 TAAATTTGCATAATATT 17 V_TCFE2A_04_M02927 TRANSFAC + 4757434 4757450 9.0E-06 TTAGACAGATGTTCAGA 17 V_XFD1_01_M00267 TRANSFAC - 4757772 4757785 1.0E-06 CAAGTAAATAAATG 14 V_FOXA2_04_M02749 TRANSFAC - 4757771 4757787 2.0E-06 CCCAAGTAAATAAATGT 17 V_CEBP_Q3_M00770 TRANSFAC - 4757471 4757482 3.0E-06 ATATTATGCAAA 12 V_HMGIY_Q3_M01010 TRANSFAC - 4757384 4757398 4.0E-06 CTTGTAATTTTTTCT 15 V_FOXD3_01_M00130 TRANSFAC + 4757773 4757784 8.0E-06 ATTTATTTACTT 12 V_MMEF2_Q6_M00405 TRANSFAC + 4758055 4758070 9.0E-06 GAGATTATAAATAGCC 16 V_GATA3_03_M00351 TRANSFAC + 4758552 4758561 0.0E+00 AAAGATCTTA 10 V_MAFB_03_M02879 TRANSFAC + 4757469 4757483 0.0E+00 AATTTGCATAATATT 15 V_OCT1_Q5_01_M00930 TRANSFAC + 4757468 4757478 1.0E-06 AAATTTGCATA 11 V_MEF2_02_M00231 TRANSFAC + 4758052 4758073 0.0E+00 TTAGAGATTATAAATAGCCTAT 22 V_OCTAMER_01_M01324 TRANSFAC - 4757466 4757482 9.0E-06 ATATTATGCAAATTTAG 17 V_OCTAMER_01_M01324 TRANSFAC + 4757467 4757483 0.0E+00 TAAATTTGCATAATATT 17 V_IRF_Q6_01_M00972 TRANSFAC - 4758113 4758123 4.0E-06 GGAAGTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC - 4758110 4758125 9.0E-06 AAGGAAGTGAAAAGAC 16 V_IRF2_Q6_M01882 TRANSFAC - 4758489 4758504 4.0E-06 CGGAAAGCGAAAGGAG 16 V_OCT1_01_M00135 TRANSFAC - 4757465 4757483 0.0E+00 AATATTATGCAAATTTAGT 19 V_POU2F3_01_M01476 TRANSFAC - 4757466 4757481 0.0E+00 TATTATGCAAATTTAG 16 V_FOXO3A_Q1_M01137 TRANSFAC - 4757772 4757783 4.0E-06 AGTAAATAAATG 12 V_CEBP_Q2_M00190 TRANSFAC + 4757469 4757482 2.0E-06 AATTTGCATAATAT 14 V_YY1_Q6_M00793 TRANSFAC - 4758289 4758297 7.0E-06 GCCATCTTT 9 V_HNF3_Q6_01_M01012 TRANSFAC + 4757771 4757788 8.0E-06 ACATTTATTTACTTGGGA 18 V_GABPA_04_M02858 TRANSFAC + 4758123 4758138 3.0E-06 CTTTCTTCCCCCTCTC 16 V_FOXJ1_03_M02750 TRANSFAC - 4757770 4757785 6.0E-06 CAAGTAAATAAATGTG 16 V_OCT_C_M00210 TRANSFAC + 4757467 4757479 3.0E-06 TAAATTTGCATAA 13 V_AIRE_02_M01000 TRANSFAC + 4758057 4758081 6.0E-06 GATTATAAATAGCCTATACAGCCTA 25 V_PU1_Q4_M01172 TRANSFAC + 4758111 4758129 0.0E+00 TCTTTTCACTTCCTTTCTT 19 V_TCFAP2E_04_M02926 TRANSFAC + 4757380 4757393 4.0E-06 TTAAAGAAAAAATT 14 V_CDX_Q5_M00991 TRANSFAC + 4757539 4757556 8.0E-06 AACTCCTAGATTCATATG 18 V_CEBPB_01_M00109 TRANSFAC - 4757469 4757482 3.0E-06 ATATTATGCAAATT 14 V_MEF2A_Q6_M02024 TRANSFAC - 4758058 4758067 7.0E-06 TATTTATAAT 10 V_CDP_04_M01344 TRANSFAC - 4758053 4758067 8.0E-06 TATTTATAATCTCTA 15 V_TAL1_GATA1_01_M02243 TRANSFAC + 4757554 4757571 3.0E-06 ATGCTAGTTGGTGATAAG 18 V_ELF4_04_M02850 TRANSFAC + 4757379 4757395 1.0E-06 GTTAAAGAAAAAATTAC 17 V_FREAC3_01_M00291 TRANSFAC - 4757772 4757787 1.0E-06 CCCAAGTAAATAAATG 16 V_OCT1_02_M00136 TRANSFAC - 4757469 4757483 5.0E-06 AATATTATGCAAATT 15 V_ARID5A_03_M02736 TRANSFAC + 4757476 4757489 6.0E-06 ATAATATTTCAGGA 14 V_STAF_01_M00262 TRANSFAC - 4758270 4758291 0.0E+00 TTTTCCCACAATCCCCCACGAC 22 V_E2F1_01_M01250 TRANSFAC + 4758187 4758194 1.0E-05 CGTTTCTT 8 V_NKX61_01_M00424 TRANSFAC - 4757386 4757398 9.0E-06 CTTGTAATTTTTT 13 V_IRF2_01_M00063 TRANSFAC - 4758491 4758503 4.0E-06 GGAAAGCGAAAGG 13 Hand1_Tcfe2a_MA0092.1 JASPAR - 4758081 4758090 7.0E-06 GATCTGGAAT 10 V_RSRFC4_Q2_M00407 TRANSFAC - 4758055 4758071 3.0E-06 AGGCTATTTATAATCTC 17 V_RSRFC4_Q2_M00407 TRANSFAC + 4758056 4758072 0.0E+00 AGATTATAAATAGCCTA 17 V_AMEF2_Q6_M00403 TRANSFAC + 4758055 4758072 0.0E+00 GAGATTATAAATAGCCTA 18 V_HNF1B_04_M02266 TRANSFAC + 4758016 4758027 5.0E-06 TCACTGGTTAAC 12 V_IRF3_Q3_M01279 TRANSFAC + 4758489 4758501 2.0E-06 CTCCTTTCGCTTT 13 V_HNF3A_01_M01261 TRANSFAC - 4757775 4757784 7.0E-06 AAGTAAATAA 10 V_CDX2_Q5_M00729 TRANSFAC - 4758047 4758060 9.0E-06 AATCTCTAATTGCC 14 V_MEF2_03_M00232 TRANSFAC + 4758052 4758073 2.0E-06 TTAGAGATTATAAATAGCCTAT 22 V_ISRE_01_M00258 TRANSFAC - 4757940 4757954 1.0E-05 CAGTTTCCTGTTCCC 15 V_ELF5_01_M01197 TRANSFAC + 4757483 4757493 1.0E-05 TTCAGGAAGTT 11 V_CUX1_04_M02959 TRANSFAC - 4758053 4758067 8.0E-06 TATTTATAATCTCTA 15 V_YY1_Q6_02_M01035 TRANSFAC + 4757989 4757999 7.0E-06 CTTGCCATTTT 11 V_YY1_Q6_02_M01035 TRANSFAC - 4758290 4758300 7.0E-06 GCCGCCATCTT 11 V_OCT1_04_M00138 TRANSFAC - 4757463 4757485 0.0E+00 GAAATATTATGCAAATTTAGTGG 23 V_REX1_03_M01744 TRANSFAC + 4758290 4758301 1.0E-06 AAGATGGCGGCT 12 Tal1_Gata1_MA0140.1 JASPAR + 4757554 4757571 3.0E-06 ATGCTAGTTGGTGATAAG 18 V_TAL1BETAE47_01_M00065 TRANSFAC + 4757434 4757449 3.0E-06 TTAGACAGATGTTCAG 16 V_XFD2_01_M00268 TRANSFAC + 4758058 4758071 6.0E-06 ATTATAAATAGCCT 14 V_MEF2_Q6_01_M00941 TRANSFAC - 4758059 4758070 1.0E-06 GGCTATTTATAA 12 V_STAF_02_M00264 TRANSFAC - 4758271 4758291 5.0E-06 TTTTCCCACAATCCCCCACGA 21 V_ATF1_04_M02842 TRANSFAC - 4762465 4762478 3.0E-06 GAATGACAAAGAAC 14 V_OCT4_02_M01124 TRANSFAC + 4757548 4757562 2.0E-06 ATTCATATGCTAGTT 15 V_OCT4_02_M01124 TRANSFAC + 4762469 4762483 8.0E-06 TTTGTCATTCTGGAG 15 V_SOX11_03_M02795 TRANSFAC - 4762463 4762479 3.0E-06 AGAATGACAAAGAACAA 17 V_BLIMP1_Q6_M01066 TRANSFAC - 4758141 4758156 5.0E-06 AAAGCTGGGAAAGTGA 16 V_OCT1_B_M00342 TRANSFAC - 4757469 4757478 1.0E-06 TATGCAAATT 10 V_OCT_Q6_M00795 TRANSFAC + 4757468 4757478 1.0E-06 AAATTTGCATA 11 V_MAF_Q6_01_M00983 TRANSFAC + 4758005 4758015 4.0E-06 TCCTGAGTCAG 11 V_CETS1P54_03_M01078 TRANSFAC + 4762577 4762592 9.0E-06 GCTACAGGAAGTAGTG 16 V_IRF7_01_M00453 TRANSFAC - 4758134 4758151 7.0E-06 TGGGAAAGTGAAGGAGAG 18 V_TAL1BETAITF2_01_M00070 TRANSFAC + 4757434 4757449 5.0E-06 TTAGACAGATGTTCAG 16 V_PTF1BETA_Q6_M00657 TRANSFAC + 4757385 4757398 4.0E-06 GAAAAAATTACAAG 14 V_YY1_03_M02044 TRANSFAC - 4758289 4758300 3.0E-06 GCCGCCATCTTT 12 V_SOX15_03_M02799 TRANSFAC - 4758520 4758536 8.0E-06 TGGTGCACAATTGAATA 17 V_CIZ_01_M00734 TRANSFAC + 4757385 4757393 5.0E-06 GAAAAAATT 9 V_TBP_01_M00471 TRANSFAC + 4758060 4758067 4.0E-06 TATAAATA 8 V_POU5F1_01_M01307 TRANSFAC - 4757469 4757478 6.0E-06 TATGCAAATT 10 V_POU5F1_01_M01307 TRANSFAC - 4757995 4758004 9.0E-06 CATGCAAAAT 10 V_CEBPA_01_M00116 TRANSFAC + 4757469 4757482 7.0E-06 AATTTGCATAATAT 14 V_OCT2_01_M01368 TRANSFAC - 4757466 4757481 0.0E+00 TATTATGCAAATTTAG 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 4757434 4757449 1.0E-06 TTAGACAGATGTTCAG 16 V_E2F6_01_M01252 TRANSFAC + 4758187 4758194 1.0E-05 CGTTTCTT 8 V_MEIS1_01_M00419 TRANSFAC - 4758326 4758337 9.0E-06 CATTGACAGGAC 12 V_AIRE_01_M00999 TRANSFAC - 4758063 4758088 1.0E-06 TCTGGAATAGGCTGTATAGGCTATTT 26 V_ZFP206_01_M01742 TRANSFAC - 4758200 4758210 5.0E-06 TGCGCAAGCGC 11 V_RBPJK_01_M01112 TRANSFAC + 4758280 4758290 4.0E-06 ATTGTGGGAAA 11 V_HNF1B_01_M01425 TRANSFAC - 4757526 4757542 9.0E-06 AGTTCTTAACCAGAAGT 17 V_NRF2_Q4_M00821 TRANSFAC + 4758004 4758016 1.0E-05 GTCCTGAGTCAGT 13 V_NRF1_Q6_M00652 TRANSFAC + 4758201 4758210 8.0E-06 CGCTTGCGCA 10 V_FOX_Q2_M00809 TRANSFAC - 4758161 4758173 3.0E-06 GATTGTTGGTTAA 13 V_RSRFC4_01_M00026 TRANSFAC + 4758056 4758071 3.0E-06 AGATTATAAATAGCCT 16 V_RSRFC4_01_M00026 TRANSFAC - 4758056 4758071 1.0E-06 AGGCTATTTATAATCT 16 V_ZABC1_01_M01306 TRANSFAC + 4758095 4758102 1.0E-05 ATTCCAAC 8 V_OCT1_07_M00248 TRANSFAC - 4757469 4757480 1.0E-06 ATTATGCAAATT 12 V_SRF_06_M02916 TRANSFAC + 4757378 4757394 0.0E+00 AGTTAAAGAAAAAATTA 17 V_SRF_06_M02916 TRANSFAC + 4757379 4757395 1.0E-06 GTTAAAGAAAAAATTAC 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 4758114 4758131 6.0E-06 GGAAGAAAGGAAGTGAAA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 4758122 4758139 6.0E-06 GGAGAGGGGGAAGAAAGG 18 V_FOXJ2_01_M00422 TRANSFAC - 4757771 4757788 8.0E-06 TCCCAAGTAAATAAATGT 18 V_HNF3B_Q6_M02014 TRANSFAC + 4757775 4757783 6.0E-06 TTATTTACT 9 V_PAX4_02_M00377 TRANSFAC + 4757386 4757396 3.0E-06 AAAAAATTACA 11 V_MEF2A_05_M01301 TRANSFAC - 4758059 4758070 1.0E-06 GGCTATTTATAA 12 V_HMEF2_Q6_M00406 TRANSFAC + 4758057 4758072 2.0E-06 GATTATAAATAGCCTA 16 V_CEBP_Q2_01_M00912 TRANSFAC + 4757471 4757482 1.0E-06 TTTGCATAATAT 12 V_MAFK_04_M02880 TRANSFAC + 4757385 4757399 2.0E-06 GAAAAAATTACAAGC 15 V_ELK1_03_M01163 TRANSFAC - 4757525 4757535 1.0E-05 AACCAGAAGTG 11 V_OBOX5_01_M01381 TRANSFAC + 4758051 4758067 5.0E-06 ATTAGAGATTATAAATA 17 V_OBOX6_06_M03067 TRANSFAC - 4758051 4758067 5.0E-06 TATTTATAATCTCTAAT 17 V_AR_Q2_M00447 TRANSFAC - 4758030 4758044 5.0E-06 GGAACCTGAAGTTCA 15 V_SMAD1_01_M01590 TRANSFAC - 4762466 4762477 3.0E-06 AATGACAAAGAA 12 V_CEBPA_Q6_M01866 TRANSFAC - 4757470 4757482 1.0E-06 ATATTATGCAAAT 13

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