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MTR Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4548 5-methyltetrahydrofolate-homocysteine methyltransferase chr1 + 236953580 - 236959080 236958580 Transcription Factor Binding Sites   Download all TFBS in the MTR promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HINFP1_C2H2_full_dimeric_19_1 SELEX + 236958827 236958845 7.0E-06 GCGGGCTTTCGGGGTCCGC 19 HINFP1_C2H2_full_dimeric_19_1 SELEX - 236958827 236958845 2.0E-06 GCGGACCCCGAAAGCCCGC 19 En1_MA0027.1 JASPAR - 236959464 236959474 8.0E-06 AAATAGTTCTC 11 ELF4_ETS_full_monomeric_12_1 SELEX - 236958390 236958401 4.0E-06 GATCCGGAAGTG 12 NFYA_MA0060.1 JASPAR - 236958485 236958500 2.0E-06 ATCAACCAATCACCTG 16 GLIS1_C2H2_DBD_monomeric_16_1 SELEX + 236958846 236958861 2.0E-06 AGTCCCCCCGCGACGC 16 Pax4_MA0068.1 JASPAR + 236958200 236958229 0.0E+00 AAAAAATTCTAATTACTACCATCCTATCAT 30 MYBL1_MYB_DBD_dimeric_12_2 SELEX - 236958256 236958267 5.0E-06 ACAGTTAACCTC 12 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 236959493 236959503 6.0E-06 GAAAATAAAAA 11 MNT_bHLH_DBD_dimeric_10_1 SELEX + 236958773 236958782 4.0E-06 AGCACGTGCT 10 MNT_bHLH_DBD_dimeric_10_1 SELEX - 236958773 236958782 4.0E-06 AGCACGTGCT 10 NFATC1_NFAT_full_dimeric_20_1 SELEX + 236959485 236959504 4.0E-06 CATGGAACTTTTTATTTTCT 20 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 236959493 236959503 4.0E-06 GAAAATAAAAA 11 GSC_homeodomain_full_monomeric_10_1 SELEX + 236959097 236959106 2.0E-06 CCTAATCCCT 10 Myf_MA0055.1 JASPAR + 236958479 236958490 6.0E-06 AAACAGCAGGTG 12 Myf_MA0055.1 JASPAR - 236958784 236958795 2.0E-06 CGGCAACTGCTG 12 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 236958286 236958301 8.0E-06 ACAGCAAAACGGAACT 16 ELF5_ETS_full_monomeric_11_1 SELEX - 236958390 236958400 7.0E-06 ATCCGGAAGTG 11 TFAP2A_MA0003.1 JASPAR + 236958814 236958822 8.0E-06 GCCCTAGGG 9 TFAP2A_MA0003.1 JASPAR - 236958815 236958823 8.0E-06 GCCCTAGGG 9 CPEB1_RRM_full_monomeric_8_1 SELEX - 236959493 236959500 4.0E-06 AATAAAAA 8 ETV6_ETS_full_dimeric_15_1 SELEX - 236958390 236958404 3.0E-06 CAGGATCCGGAAGTG 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 236959493 236959505 3.0E-06 CAGAAAATAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 236959366 236959378 5.0E-06 GCAAAAAAAAAAA 13 RREB1_MA0073.1 JASPAR - 236959055 236959074 4.0E-06 ACACAACCCAACCACGCAGA 20 V_AP2ALPHA_01_M00469 TRANSFAC + 236958814 236958822 8.0E-06 GCCCTAGGG 9 V_AP2ALPHA_01_M00469 TRANSFAC - 236958815 236958823 8.0E-06 GCCCTAGGG 9 V_MEIS1_02_M01419 TRANSFAC - 236958499 236958514 8.0E-06 CATTGGCTGTCAATAT 16 V_FREAC7_01_M00293 TRANSFAC + 236959392 236959407 1.0E-05 TATTCGTAAATATGTA 16 V_CDX2_Q5_01_M01659 TRANSFAC + 236959394 236959404 8.0E-06 TTCGTAAATAT 11 V_FLI1_Q6_M01208 TRANSFAC + 236958640 236958650 7.0E-06 CCGGATGTCAC 11 V_NFY_Q6_M00185 TRANSFAC - 236958488 236958498 5.0E-06 CAACCAATCAC 11 V_HOXA13_02_M01297 TRANSFAC - 236959493 236959501 4.0E-06 AAATAAAAA 9 V_MEF2_02_M00231 TRANSFAC - 236959464 236959485 4.0E-06 GTAGTAGTTTTAAATAGTTCTC 22 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 236958253 236958266 5.0E-06 TGAGAGGTTAACTG 14 V_GTF2IRD1_01_M01229 TRANSFAC - 236959097 236959105 7.0E-06 GGGATTAGG 9 V_FOXO3A_Q1_M01137 TRANSFAC - 236959493 236959504 8.0E-06 AGAAAATAAAAA 12 V_GLI1_01_M01702 TRANSFAC + 236958562 236958572 4.0E-06 GACCTCCCACG 11 V_TR4_Q2_M01725 TRANSFAC - 236959427 236959437 6.0E-06 CCTGAACTTTC 11 V_EVX1_01_M01475 TRANSFAC + 236958204 236958220 7.0E-06 AATTCTAATTACTACCA 17 V_NFY_Q6_01_M00775 TRANSFAC - 236958489 236958501 0.0E+00 TATCAACCAATCA 13 V_CMYC_02_M01154 TRANSFAC + 236958772 236958783 7.0E-06 AAGCACGTGCTC 12 V_CMYC_02_M01154 TRANSFAC - 236958772 236958783 4.0E-06 GAGCACGTGCTT 12 V_BRN2_01_M00145 TRANSFAC - 236959368 236959383 1.0E-05 ACCATGCAAAAAAAAA 16 V_TCFAP2E_04_M02926 TRANSFAC - 236959366 236959379 1.0E-06 TGCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 236959368 236959381 1.0E-05 CATGCAAAAAAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC + 236959470 236959479 5.0E-06 TATTTAAAAC 10 V_TGIF2_01_M01407 TRANSFAC - 236958499 236958514 4.0E-06 CATTGGCTGTCAATAT 16 V_NFY_C_M00209 TRANSFAC + 236958487 236958500 2.0E-06 GGTGATTGGTTGAT 14 V_CP2_02_M00947 TRANSFAC - 236959336 236959350 5.0E-06 GCTGGTTTATGCTGC 15 V_ELF4_04_M02850 TRANSFAC - 236959362 236959378 0.0E+00 GCAAAAAAAAAAACTTC 17 V_ELF4_04_M02850 TRANSFAC - 236959363 236959379 2.0E-06 TGCAAAAAAAAAAACTT 17 V_ELF4_04_M02850 TRANSFAC - 236959364 236959380 2.0E-06 ATGCAAAAAAAAAAACT 17 V_ELF4_04_M02850 TRANSFAC - 236959365 236959381 7.0E-06 CATGCAAAAAAAAAAAC 17 V_GLI3_02_M01704 TRANSFAC + 236958562 236958572 7.0E-06 GACCTCCCACG 11 V_GC_01_M00255 TRANSFAC + 236958553 236958566 9.0E-06 AAGGGGCGGGACCT 14 V_MEIS2_01_M01488 TRANSFAC - 236958499 236958514 6.0E-06 CATTGGCTGTCAATAT 16 V_MYF_01_M01302 TRANSFAC + 236958479 236958490 6.0E-06 AAACAGCAGGTG 12 V_MYF_01_M01302 TRANSFAC - 236958784 236958795 2.0E-06 CGGCAACTGCTG 12 V_TGIF_02_M01346 TRANSFAC + 236958498 236958514 2.0E-06 GATATTGACAGCCAATG 17 V_LMX1_01_M01409 TRANSFAC - 236958203 236958219 6.0E-06 GGTAGTAATTAGAATTT 17 V_ZFP105_03_M02827 TRANSFAC - 236958226 236958240 5.0E-06 TACAAACAAGAATGA 15 V_ZFP105_03_M02827 TRANSFAC - 236959365 236959379 3.0E-06 TGCAAAAAAAAAAAC 15 V_ZFP105_03_M02827 TRANSFAC - 236959490 236959504 4.0E-06 AGAAAATAAAAAGTT 15 V_TCFAP2C_03_M02821 TRANSFAC + 236959100 236959114 1.0E-06 AATCCCTGGGGCGAT 15 V_CMYC_01_M01145 TRANSFAC + 236958772 236958783 1.0E-06 AAGCACGTGCTC 12 V_CMYC_01_M01145 TRANSFAC - 236958772 236958783 6.0E-06 GAGCACGTGCTT 12 V_ZBED6_01_M01598 TRANSFAC + 236958902 236958913 0.0E+00 CAGGCTCGCCTG 12 V_SPDEF_03_M02811 TRANSFAC + 236958389 236958404 2.0E-06 ACACTTCCGGATCCTG 16 V_SP1_Q6_M00196 TRANSFAC + 236958553 236958565 8.0E-06 AAGGGGCGGGACC 13 V_IRF3_Q3_M01279 TRANSFAC + 236958358 236958370 8.0E-06 TGACTTTTCCTTA 13 V_MEF2_03_M00232 TRANSFAC - 236959464 236959485 4.0E-06 GTAGTAGTTTTAAATAGTTCTC 22 V_GADP_01_M01258 TRANSFAC + 236958390 236958401 4.0E-06 CACTTCCGGATC 12 V_RREB1_01_M00257 TRANSFAC - 236959061 236959074 8.0E-06 ACACAACCCAACCA 14 V_HFH1_01_M00129 TRANSFAC - 236959315 236959326 6.0E-06 GAAAGTTTAGTT 12 V_ARID3A_04_M02735 TRANSFAC - 236958203 236958219 8.0E-06 GGTAGTAATTAGAATTT 17 V_TGIF1_01_M03111 TRANSFAC + 236958498 236958514 2.0E-06 GATATTGACAGCCAATG 17 V_LIM1_01_M01418 TRANSFAC - 236958203 236958219 9.0E-06 GGTAGTAATTAGAATTT 17 V_CAAT_01_M00254 TRANSFAC - 236958489 236958500 2.0E-06 ATCAACCAATCA 12 V_CREBP1CJUN_01_M00041 TRANSFAC - 236959303 236959310 1.0E-05 TGACGTTA 8 V_ZIC2_05_M02940 TRANSFAC + 236958477 236958491 9.0E-06 CTAAACAGCAGGTGA 15 V_GLI2_01_M01703 TRANSFAC + 236958562 236958572 6.0E-06 GACCTCCCACG 11 V_POU5F1_01_M01307 TRANSFAC - 236959372 236959381 4.0E-06 CATGCAAAAA 10 V_EHF_06_M02745 TRANSFAC - 236958389 236958403 2.0E-06 AGGATCCGGAAGTGT 15 V_MRG2_01_M01395 TRANSFAC - 236958499 236958514 2.0E-06 CATTGGCTGTCAATAT 16 V_FAC1_01_M00456 TRANSFAC - 236959199 236959212 1.0E-06 GAGCAAAACACGTA 14 V_PKNOX2_01_M01411 TRANSFAC - 236958499 236958514 1.0E-06 CATTGGCTGTCAATAT 16 V_MAX_01_M00119 TRANSFAC + 236958771 236958784 8.0E-06 AAAGCACGTGCTCC 14 V_MAX_01_M00119 TRANSFAC - 236958771 236958784 8.0E-06 GGAGCACGTGCTTT 14 V_NFY_01_M00287 TRANSFAC - 236958485 236958500 1.0E-06 ATCAACCAATCACCTG 16 V_LMX1B_01_M01363 TRANSFAC + 236958203 236958219 7.0E-06 AAATTCTAATTACTACC 17 V_TBX22_01_M01195 TRANSFAC - 236959399 236959417 8.0E-06 AGGTGCGCAATACATATTT 19 V_TCFAP2A_03_M02819 TRANSFAC + 236959100 236959114 1.0E-06 AATCCCTGGGGCGAT 15 V_SRF_06_M02916 TRANSFAC - 236959361 236959377 9.0E-06 CAAAAAAAAAAACTTCC 17 V_SRF_06_M02916 TRANSFAC - 236959362 236959378 0.0E+00 GCAAAAAAAAAAACTTC 17 V_SRF_06_M02916 TRANSFAC - 236959363 236959379 2.0E-06 TGCAAAAAAAAAAACTT 17 V_SRF_06_M02916 TRANSFAC - 236959364 236959380 1.0E-06 ATGCAAAAAAAAAAACT 17 V_SRF_06_M02916 TRANSFAC - 236959365 236959381 4.0E-06 CATGCAAAAAAAAAAAC 17 V_SRF_06_M02916 TRANSFAC - 236959490 236959506 6.0E-06 GCAGAAAATAAAAAGTT 17 V_SATB1_01_M01232 TRANSFAC + 236959392 236959403 6.0E-06 TATTCGTAAATA 12 V_GLI_Q2_M01037 TRANSFAC - 236958561 236958572 9.0E-06 CGTGGGAGGTCC 12 V_NFYA_Q5_M02106 TRANSFAC - 236958485 236958498 9.0E-06 CAACCAATCACCTG 14 V_TCFAP2E_03_M02822 TRANSFAC + 236959100 236959114 4.0E-06 AATCCCTGGGGCGAT 15 V_SP1_Q4_01_M00932 TRANSFAC + 236958553 236958565 9.0E-06 AAGGGGCGGGACC 13 V_TCF3_05_M02920 TRANSFAC - 236959366 236959380 0.0E+00 ATGCAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 236959493 236959507 1.0E-06 AGCAGAAAATAAAAA 15 V_PAX4_04_M00380 TRANSFAC + 236958200 236958229 1.0E-05 AAAAAATTCTAATTACTACCATCCTATCAT 30 V_DMRT5_01_M01150 TRANSFAC - 236959307 236959321 2.0E-06 TTTAGTTACTGTGAC 15 V_ZIC1_05_M02939 TRANSFAC + 236958477 236958491 9.0E-06 CTAAACAGCAGGTGA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.