Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

MT1G Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4495 metallothionein 1G chr16 - 56701477 - 56706977 56701977 Transcription Factor Binding Sites   Download all TFBS in the MT1G promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 56705976 56705987 6.0E-06 TATTTACACAAG 12 NHLH1_MA0048.1 JASPAR + 56702133 56702144 8.0E-06 GCGCAGCTGGGC 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 56705974 56705985 3.0E-06 TGTGTAAATAAA 12 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 56705960 56705977 9.0E-06 ATAATTACTAATACTTTA 18 RFX4_RFX_DBD_dimeric_16_1 SELEX + 56705953 56705968 7.0E-06 CATTTCCATAATTACT 16 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 56705952 56705966 4.0E-06 TCATTTCCATAATTA 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 56705952 56705966 2.0E-06 TAATTATGGAAATGA 15 FOXL1_forkhead_full_dimeric_13_1 SELEX - 56705971 56705983 9.0E-06 TGTAAATAAAGTA 13 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 56705975 56705985 3.0E-06 TGTGTAAATAA 11 TBP_MA0108.2 JASPAR - 56701994 56702008 0.0E+00 CTATAAAAACAGCCG 15 POU1F1_POU_DBD_monomeric_14_1 SELEX - 56705951 56705964 1.0E-06 ATTATGGAAATGAT 14 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 56699472 56699484 1.0E-06 TGCCCTAGGGGCA 13 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 56699472 56699484 0.0E+00 TGCCCCTAGGGCA 13 POU2F2_POU_DBD_monomeric_11_1 SELEX - 56705953 56705963 7.0E-06 TTATGGAAATG 11 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 56699513 56699525 2.0E-06 AAGCAACAGGTAA 13 E2F7_E2F_DBD_dimeric_14_1 SELEX - 56699802 56699815 2.0E-06 TATTCCCGCCAAGA 14 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 56699472 56699484 0.0E+00 TGCCCTAGGGGCA 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 56699472 56699484 0.0E+00 TGCCCCTAGGGCA 13 POU3F3_POU_DBD_monomeric_13_1 SELEX - 56705952 56705964 2.0E-06 ATTATGGAAATGA 13 E2F8_E2F_DBD_dimeric_12_1 SELEX - 56699803 56699814 7.0E-06 ATTCCCGCCAAG 12 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX - 56705959 56705968 5.0E-06 AGTAATTATG 10 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 56705945 56705957 5.0E-06 AAATGATGAAATC 13 MAFK_bZIP_full_dimeric_15_1 SELEX - 56702059 56702073 8.0E-06 GTGCGGACTCAGCGG 15 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 56699513 56699527 2.0E-06 AAGCAACAGGTAAGT 15 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 56699472 56699484 2.0E-06 TGCCCTAGGGGCA 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 56699472 56699484 0.0E+00 TGCCCCTAGGGCA 13 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 56705960 56705974 5.0E-06 AGTATTAGTAATTAT 15 POU3F1_POU_DBD_monomeric_12_1 SELEX - 56705952 56705963 2.0E-06 TTATGGAAATGA 12 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 56699472 56699484 1.0E-06 TGCCCTAGGGGCA 13 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 56699472 56699484 0.0E+00 TGCCCCTAGGGCA 13 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 56705951 56705967 4.0E-06 ATCATTTCCATAATTAC 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 56705951 56705967 2.0E-06 GTAATTATGGAAATGAT 17 POU2F1_POU_DBD_monomeric_12_1 SELEX - 56705953 56705964 3.0E-06 ATTATGGAAATG 12 TFAP2A_MA0003.1 JASPAR + 56699473 56699481 8.0E-06 GCCCTAGGG 9 FOXB1_forkhead_full_monomeric_9_1 SELEX - 56705975 56705983 4.0E-06 TGTAAATAA 9 POU3F2_POU_DBD_monomeric_12_1 SELEX - 56705952 56705963 2.0E-06 TTATGGAAATGA 12 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 56705975 56705985 2.0E-06 TGTGTAAATAA 11 V_AP2ALPHA_01_M00469 TRANSFAC + 56699473 56699481 8.0E-06 GCCCTAGGG 9 V_DBX1_01_M01483 TRANSFAC - 56705961 56705977 1.0E-05 TAAAGTATTAGTAATTA 17 V_DBX1_01_M01483 TRANSFAC - 56705964 56705980 2.0E-06 AAATAAAGTATTAGTAA 17 V_XFD1_01_M00267 TRANSFAC - 56705972 56705985 1.0E-06 TGTGTAAATAAAGT 14 V_FOXA2_04_M02749 TRANSFAC - 56705971 56705987 2.0E-06 CTTGTGTAAATAAAGTA 17 V_MTF1_Q4_M00650 TRANSFAC - 56702019 56702032 1.0E-06 TCTGCGCCCGGCCC 14 V_MTF1_Q4_M00650 TRANSFAC + 56702047 56702060 5.0E-06 CTTGCACCCAGCCC 14 V_MAFB_03_M02879 TRANSFAC - 56705923 56705937 6.0E-06 AAATTCCAAAATAAC 15 V_SP1_Q6_01_M00931 TRANSFAC - 56702034 56702043 4.0E-06 GGGGCGGGGC 10 V_OCT1_Q5_01_M00930 TRANSFAC + 56705952 56705962 7.0E-06 TCATTTCCATA 11 V_OCT1_01_M00135 TRANSFAC - 56705949 56705967 7.0E-06 GTAATTATGGAAATGATGA 19 V_FOXO3A_Q1_M01137 TRANSFAC - 56705972 56705983 3.0E-06 TGTAAATAAAGT 12 V_HNF3_Q6_01_M01012 TRANSFAC + 56705971 56705988 3.0E-06 TACTTTATTTACACAAGT 18 V_FOXJ1_03_M02750 TRANSFAC - 56705970 56705985 9.0E-06 TGTGTAAATAAAGTAT 16 V_HOXC6_01_M01406 TRANSFAC + 56705956 56705972 9.0E-06 TTCCATAATTACTAATA 17 V_AP4_Q6_02_M01860 TRANSFAC - 56702130 56702142 6.0E-06 CCAGCTGCGCTCA 13 V_CEBPB_01_M00109 TRANSFAC - 56705944 56705957 6.0E-06 AAATGATGAAATCA 14 V_NKX62_Q2_M00489 TRANSFAC - 56705959 56705970 9.0E-06 TTAGTAATTATG 12 V_CP2_02_M00947 TRANSFAC + 56699817 56699831 2.0E-06 GCTGGTTTGAAGTAG 15 V_CP2_02_M00947 TRANSFAC - 56705865 56705879 2.0E-06 GCTGGTTTGAAGTAG 15 V_GATA3_05_M02859 TRANSFAC + 56705938 56705959 7.0E-06 TGATTGTGATTTCATCATTTCC 22 V_TEF_Q6_M00672 TRANSFAC + 56705975 56705986 7.0E-06 TTATTTACACAA 12 V_TATA_01_M00252 TRANSFAC - 56701994 56702008 0.0E+00 CTATAAAAACAGCCG 15 V_XFD3_01_M00269 TRANSFAC - 56705972 56705985 8.0E-06 TGTGTAAATAAAGT 14 V_CEBPD_Q6_M00621 TRANSFAC + 56705945 56705956 4.0E-06 GATTTCATCATT 12 V_SP1_Q6_M00196 TRANSFAC - 56702033 56702045 7.0E-06 GCGGGGCGGGGCG 13 V_HOXB6_01_M01460 TRANSFAC - 56705957 56705972 1.0E-06 TATTAGTAATTATGGA 16 V_OCT1_05_M00161 TRANSFAC + 56705951 56705964 0.0E+00 ATCATTTCCATAAT 14 V_STAT5A_02_M00460 TRANSFAC - 56705973 56705996 3.0E-06 TTCTGAGAACTTGTGTAAATAAAG 24 V_TATA_C_M00216 TRANSFAC - 56702000 56702009 2.0E-06 ACTATAAAAA 10 V_OCT1_04_M00138 TRANSFAC - 56705947 56705969 0.0E+00 TAGTAATTATGGAAATGATGAAA 23 V_NCX_02_M01420 TRANSFAC - 56705961 56705977 8.0E-06 TAAAGTATTAGTAATTA 17 V_HB24_01_M01399 TRANSFAC + 56705958 56705972 9.0E-06 CCATAATTACTAATA 15 V_SP4_Q5_M01273 TRANSFAC + 56702034 56702044 2.0E-06 GCCCCGCCCCG 11 V_HOXB7_01_M01396 TRANSFAC - 56705955 56705970 1.0E-06 TTAGTAATTATGGAAA 16 V_FOXL1_02_M02857 TRANSFAC - 56705920 56705935 1.0E-05 ATTCCAAAATAACTTC 16 V_FOXL1_04_M02753 TRANSFAC - 56705971 56705987 3.0E-06 CTTGTGTAAATAAAGTA 17 V_HDX_01_M01333 TRANSFAC + 56699491 56699507 2.0E-06 CTTCTGAAATCATTTCA 17 V_HDX_01_M01333 TRANSFAC - 56705939 56705955 1.0E-05 ATGATGAAATCACAATC 17 V_CPHX_01_M01478 TRANSFAC - 56705942 56705955 0.0E+00 ATGATGAAATCACA 14 V_CPHX_01_M01478 TRANSFAC + 56705943 56705956 3.0E-06 GTGATTTCATCATT 14 V_AIRE_01_M00999 TRANSFAC - 56699098 56699123 7.0E-06 TTAAGTCCAGGATATAGAGGCTGCAG 26 V_FOXA2_03_M02260 TRANSFAC + 56705976 56705987 6.0E-06 TATTTACACAAG 12 V_BARX2_01_M01431 TRANSFAC - 56705955 56705970 3.0E-06 TTAGTAATTATGGAAA 16 V_SREBP_Q3_M00776 TRANSFAC + 56699788 56699799 9.0E-06 ACGATCACACTA 12 V_HB9_01_M01349 TRANSFAC - 56705955 56705970 2.0E-06 TTAGTAATTATGGAAA 16 V_DLX3_02_M02051 TRANSFAC + 56705960 56705967 5.0E-06 ATAATTAC 8 V_NMYC_01_M00055 TRANSFAC - 56701958 56701969 8.0E-06 TTCCACGTGCAC 12 V_SATB1_01_M01232 TRANSFAC - 56705961 56705972 0.0E+00 TATTAGTAATTA 12 V_HOXA7_03_M01394 TRANSFAC - 56705955 56705970 1.0E-06 TTAGTAATTATGGAAA 16 V_FREAC4_01_M00292 TRANSFAC - 56705972 56705987 8.0E-06 CTTGTGTAAATAAAGT 16 V_BHLHB2_04_M02845 TRANSFAC + 56701953 56701975 0.0E+00 AGTGGGTGCACGTGGAAGGCGGA 23 V_CEBPA_Q6_M01866 TRANSFAC + 56705924 56705936 9.0E-06 TTATTTTGGAATT 13 V_HOXC8_01_M01321 TRANSFAC - 56705957 56705972 6.0E-06 TATTAGTAATTATGGA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.