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MSRA Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4482 methionine sulfoxide reductase A chr8 + 9906829 - 9912329 9911829 Transcription Factor Binding Sites   Download all TFBS in the MSRA promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX + 9911790 9911801 8.0E-06 GCCACACCCCCT 12 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 9911559 9911568 6.0E-06 CCAATAAAAA 10 SP3_C2H2_DBD_monomeric_11_1 SELEX + 9911790 9911800 7.0E-06 GCCACACCCCC 11 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 9911559 9911568 9.0E-06 CCAATAAAAA 10 NFIA_NFI_full_dimeric_15_1 SELEX + 9913183 9913197 4.0E-06 ATGGCTCAATGCCAG 15 IRF7_IRF_DBD_dimeric_14_1 SELEX - 9911506 9911519 2.0E-06 TCCAAAGTGAAAAC 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 9913162 9913178 1.0E-06 AGATTAAACATCACTTA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 9911790 9911800 4.0E-06 GCCACACCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 9911814 9911824 3.0E-06 AACACGCCCCC 11 ZNF232_C2H2_full_monomeric_19_1 SELEX - 9913171 9913189 8.0E-06 GAGCCATGTGTAGATTAAA 19 NFIX_NFI_full_dimeric_15_2 SELEX + 9913183 9913197 6.0E-06 ATGGCTCAATGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 9913183 9913197 2.0E-06 CTGGCATTGAGCCAT 15 IRF1_MA0050.1 JASPAR - 9911506 9911517 3.0E-06 CAAAGTGAAAAC 12 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 9911559 9911568 0.0E+00 CCAATAAAAA 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 9911558 9911568 1.0E-05 TCCAATAAAAA 11 OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 9913157 9913164 7.0E-06 TTAATCCT 8 znf143_MA0088.1 JASPAR + 9912119 9912138 8.0E-06 CAGCCCCCAGGAGGCCTTGC 20 SP1_C2H2_DBD_monomeric_11_1 SELEX + 9911790 9911800 8.0E-06 GCCACACCCCC 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 9911559 9911568 0.0E+00 CCAATAAAAA 10 PITX1_homeodomain_full_monomeric_9_1 SELEX - 9913157 9913165 9.0E-06 CTTAATCCT 9 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 9911559 9911567 6.0E-06 CCAATAAAA 9 FEV_MA0156.1 JASPAR + 9912471 9912478 1.0E-05 CAGGAAAT 8 Hltf_MA0109.1 JASPAR - 9912891 9912900 2.0E-06 AAACTTTTAT 10 NFIB_NFI_full_dimeric_15_1 SELEX + 9913183 9913197 4.0E-06 ATGGCTCAATGCCAG 15 Myf_MA0055.1 JASPAR + 9913008 9913019 4.0E-06 CAGCAGCAGCAG 12 FOXI1_forkhead_full_dimeric_17_1 SELEX - 9913168 9913184 1.0E-06 ATGTGTAGATTAAACAT 17 GSC2_homeodomain_DBD_monomeric_10_1 SELEX - 9913156 9913165 7.0E-06 CTTAATCCTC 10 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 9911559 9911568 0.0E+00 CCAATAAAAA 10 CPEB1_RRM_full_monomeric_8_1 SELEX + 9911561 9911568 4.0E-06 AATAAAAA 8 NRF1_NRF_full_dimeric_12_1 SELEX - 9912207 9912218 0.0E+00 CGCGCATGCGCA 12 ELF5_MA0136.1 JASPAR + 9913217 9913225 5.0E-06 AATTTCCTT 9 NFE2L2_MA0150.1 JASPAR - 9912677 9912687 9.0E-06 GTGACTCAGCC 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 9911559 9911568 0.0E+00 CCAATAAAAA 10 V_RUSH1A_02_M01107 TRANSFAC - 9912891 9912900 2.0E-06 AAACTTTTAT 10 V_HOXA9_01_M01351 TRANSFAC + 9912885 9912901 5.0E-06 ACTGCTATAAAAGTTTT 17 V_MTF1_01_M01242 TRANSFAC + 9912439 9912458 4.0E-06 GAGTGCATACCGTCGCGGCC 20 V_ELK1_04_M01165 TRANSFAC - 9913659 9913669 9.0E-06 AACGGGAAGTA 11 V_OBOX5_05_M03066 TRANSFAC + 9913153 9913169 5.0E-06 TTGGAGGATTAAGTGAT 17 V_EVI1_05_M00082 TRANSFAC - 9912536 9912546 1.0E-05 AGACAAGAAAG 11 V_MAFK_03_M02776 TRANSFAC - 9913201 9913215 7.0E-06 TTTAAATGCTGAATT 15 V_STAT3STAT3_Q3_M01220 TRANSFAC + 9912603 9912616 1.0E-05 GTCCCGGGAAATGC 14 V_STAT3STAT3_Q3_M01220 TRANSFAC - 9912935 9912948 3.0E-06 GTTCTGGGAAACGC 14 V_HMGIY_Q3_M01010 TRANSFAC - 9913211 9913225 1.0E-06 AAGGAAATTTTTTAA 15 V_HMGIY_Q3_M01010 TRANSFAC - 9913212 9913226 3.0E-06 TAAGGAAATTTTTTA 15 V_BCL6_01_M01183 TRANSFAC - 9913214 9913229 8.0E-06 TTCTAAGGAAATTTTT 16 V_DEAF1_02_M01002 TRANSFAC - 9912602 9912626 9.0E-06 TCTCATTCCGGCATTTCCCGGGACA 25 V_SPIB_02_M02041 TRANSFAC - 9913659 9913668 9.0E-06 ACGGGAAGTA 10 V_ISL2_01_M01328 TRANSFAC - 9913158 9913173 5.0E-06 AAACATCACTTAATCC 16 V_IRF2_Q6_M01882 TRANSFAC - 9911504 9911519 7.0E-06 TCCAAAGTGAAAACTA 16 V_P53_DECAMER_Q2_M00761 TRANSFAC + 9913091 9913100 7.0E-06 AAACAAGTCC 10 V_E2A_Q2_M00804 TRANSFAC + 9912998 9913011 1.0E-06 CCACCTGCCGCAGC 14 V_PRX2_Q2_M02115 TRANSFAC - 9912961 9912969 8.0E-06 TAATATTAA 9 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 9913023 9913038 4.0E-06 CACCACCTGGGTGGGC 16 V_HOXD13_01_M01404 TRANSFAC + 9911556 9911571 2.0E-06 TCTCCAATAAAAACTG 16 V_CEBPB_01_M00109 TRANSFAC - 9912896 9912909 2.0E-06 AGATTTTGAAAACT 14 V_AP1_Q6_M00174 TRANSFAC - 9912678 9912688 1.0E-05 GGTGACTCAGC 11 V_ELF4_04_M02850 TRANSFAC + 9911556 9911572 1.0E-06 TCTCCAATAAAAACTGA 17 V_GC_01_M00255 TRANSFAC - 9912054 9912067 9.0E-06 AGGAGGAGGAGCTG 14 V_OBOX5_02_M01480 TRANSFAC + 9913153 9913169 5.0E-06 TTGGAGGATTAAGTGAT 17 V_MYF_01_M01302 TRANSFAC + 9913008 9913019 4.0E-06 CAGCAGCAGCAG 12 V_HOXB13_01_M01467 TRANSFAC + 9911556 9911571 2.0E-06 TCTCCAATAAAAACTG 16 V_CDX2_Q5_M00729 TRANSFAC - 9912887 9912900 0.0E+00 AAACTTTTATAGCA 14 V_TATA_C_M00216 TRANSFAC + 9912888 9912897 3.0E-06 GCTATAAAAG 10 V_EVI1_Q3_M02002 TRANSFAC + 9912537 9912545 6.0E-06 TTTCTTGTC 9 V_TCF7_03_M02817 TRANSFAC - 9913218 9913234 7.0E-06 GAAACTTCTAAGGAAAT 17 V_CDC5_01_M00478 TRANSFAC - 9913166 9913177 8.0E-06 GATTAAACATCA 12 V_NCX_02_M01420 TRANSFAC + 9913204 9913220 7.0E-06 TCAGCATTTAAAAAATT 17 V_STAT4_Q5_M02117 TRANSFAC - 9912938 9912947 7.0E-06 TTCTGGGAAA 10 V_MYOD_Q6_01_M00929 TRANSFAC - 9913020 9913037 9.0E-06 CCCACCCAGGTGGTGATG 18 V_EBNA1_01_M01745 TRANSFAC + 9912927 9912942 1.0E-05 GACAGCACGCGTTTCC 16 V_ZFP206_01_M01742 TRANSFAC + 9912207 9912217 0.0E+00 TGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 9912208 9912218 2.0E-06 CGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC + 9912297 9912307 1.0E-06 TGCGCAGGCGC 11 V_FPM315_01_M01587 TRANSFAC - 9912058 9912069 3.0E-06 GGAGGAGGAGGA 12 V_STAT1STAT1_Q3_M01212 TRANSFAC + 9912937 9912949 6.0E-06 GTTTCCCAGAACG 13 V_NRF1_Q6_M00652 TRANSFAC - 9912207 9912216 2.0E-06 CGCATGCGCA 10 V_NRF1_Q6_M00652 TRANSFAC + 9912209 9912218 4.0E-06 CGCATGCGCG 10 V_IRF1_Q6_01_M01881 TRANSFAC + 9911505 9911518 7.0E-06 AGTTTTCACTTTGG 14 V_SOX2_Q6_M01272 TRANSFAC + 9912358 9912373 6.0E-06 TTTGTCTTTGTTTGGC 16 V_PAX4_02_M00377 TRANSFAC + 9913213 9913223 5.0E-06 AAAAAATTTCC 11 V_PITX2_01_M01447 TRANSFAC + 9913153 9913169 9.0E-06 TTGGAGGATTAAGTGAT 17 V_CTF1_01_M01196 TRANSFAC - 9913183 9913196 5.0E-06 TGGCATTGAGCCAT 14 V_CTF1_01_M01196 TRANSFAC + 9913184 9913197 5.0E-06 TGGCTCAATGCCAG 14 V_NFE2L2_01_M02263 TRANSFAC - 9912677 9912687 9.0E-06 GTGACTCAGCC 11 V_HMEF2_Q6_M00406 TRANSFAC + 9912959 9912974 5.0E-06 CGTTAATATTACCTTA 16 V_ELF5_04_M02241 TRANSFAC + 9913217 9913225 5.0E-06 AATTTCCTT 9 V_HMX3_02_M01413 TRANSFAC + 9913203 9913219 8.0E-06 TTCAGCATTTAAAAAAT 17 V_ELK1_03_M01163 TRANSFAC - 9913659 9913669 4.0E-06 AACGGGAAGTA 11 TLX1_NFIC_MA0119.1 JASPAR - 9913183 9913196 5.0E-06 TGGCATTGAGCCAT 14 TLX1_NFIC_MA0119.1 JASPAR + 9913184 9913197 5.0E-06 TGGCTCAATGCCAG 14 V_FEV_01_M02269 TRANSFAC + 9912471 9912478 1.0E-05 CAGGAAAT 8 V_STAT1_Q6_M01823 TRANSFAC - 9912938 9912947 2.0E-06 TTCTGGGAAA 10 V_OTX1_01_M01366 TRANSFAC + 9913153 9913169 8.0E-06 TTGGAGGATTAAGTGAT 17 V_SMAD1_01_M01590 TRANSFAC - 9912355 9912366 3.0E-06 AAAGACAAAGGG 12 V_SOX9_Q4_M01284 TRANSFAC - 9912360 9912370 9.0E-06 AAACAAAGACA 11 V_AP2_Q3_M00800 TRANSFAC - 9912218 9912233 9.0E-06 GCCGCCGGGCAAAGGC 16 V_NANOG_02_M01247 TRANSFAC - 9912351 9912370 8.0E-06 AAACAAAGACAAAGGGACGT 20 V_OCT4_01_M01125 TRANSFAC - 9913203 9913217 8.0E-06 TTTTTAAATGCTGAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.