Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CBWD3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
445571 COBW domain containing 3 chr9 -70489677 - 70495177 70490177

Transcription Factor Binding Sites

 
Download all TFBS in the CBWD3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 70490802 70490819 0.0E+00 TGAGGTCAAAGGAGTTCA 18
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 70490808 70490820 8.0E-06 ATGAGGTCAAAGG 13
Mafb_bZIP_DBD_monomeric_12_1 SELEX + 70489468 70489479 2.0E-06 AATCTGCTGACG 12
RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 70490802 70490818 0.0E+00 GAGGTCAAAGGAGTTCA 17
Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 70490802 70490819 0.0E+00 TGAGGTCAAAGGAGTTCA 18
Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 70490336 70490348 6.0E-06 AGCCCTTAGGGCG 13
TCF7L1_HMG_full_monomeric_12_1 SELEX - 70490808 70490819 8.0E-06 TGAGGTCAAAGG 12
RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 70490802 70490818 0.0E+00 GAGGTCAAAGGAGTTCA 17
znf143_MA0088.1 JASPAR + 70490463 70490482 7.0E-06 CAGTTCCCACAGGGCATAGA 20
RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 70490802 70490818 0.0E+00 GAGGTCAAAGGAGTTCA 17
TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 70490336 70490348 5.0E-06 AGCCCTTAGGGCG 13
NRL_bZIP_DBD_monomeric_11_1 SELEX + 70489468 70489478 2.0E-06 AATCTGCTGAC 11
TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 70490336 70490348 4.0E-06 AGCCCTTAGGGCG 13
PPARG_MA0066.1 JASPAR - 70490842 70490861 8.0E-06 ATAGGTACGTGTAACTTACT 20
V_DBX1_01_M01483 TRANSFAC + 70490788 70490804 2.0E-06 ATATAAATTTATAGTGA 17
V_MYOD_Q6_M00184 TRANSFAC + 70490354 70490363 2.0E-06 ACCACCTGTC 10
V_ZEC_01_M01081 TRANSFAC + 70489529 70489541 4.0E-06 ATAGGTAGGTTGT 13
V_BCL6_01_M01183 TRANSFAC - 70490831 70490846 0.0E+00 TTACTGGTAATGCTTT 16
V_MAFB_05_M02775 TRANSFAC + 70489467 70489483 2.0E-06 GAATCTGCTGACGAAAG 17
V_DR4_Q2_M00965 TRANSFAC + 70490802 70490818 0.0E+00 TGAACTCCTTTGACCTC 17
V_CREB_01_M00039 TRANSFAC + 70490824 70490831 1.0E-05 TGACGTAA 8
V_NKX24_01_M01350 TRANSFAC - 70490436 70490451 7.0E-06 TTACCCACTCCAGATT 16
V_SRF_C_M00215 TRANSFAC + 70489516 70489530 8.0E-06 TCCTTTAATGGCAAT 15
V_GMEB1_03_M02761 TRANSFAC - 70490819 70490835 9.0E-06 GCTTTTACGTCAGGAAT 17
V_NKX22_02_M01372 TRANSFAC - 70490435 70490451 8.0E-06 TTACCCACTCCAGATTT 17
V_TBP_06_M02814 TRANSFAC - 70490789 70490804 5.0E-06 TCACTATAAATTTATA 16
V_MYOD_01_M00001 TRANSFAC - 70490353 70490364 7.0E-06 AGACAGGTGGTT 12
V_T3R_01_M00239 TRANSFAC - 70490807 70490822 5.0E-06 GAATGAGGTCAAAGGA 16
V_PLZF_02_M01075 TRANSFAC + 70490779 70490807 2.0E-06 TTCTTTCTAATATAAATTTATAGTGAACT 29
V_NMYC_01_M00055 TRANSFAC + 70489484 70489495 6.0E-06 CCCCACGTGTCG 12
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL