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MSI1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
4440 musashi RNA-binding protein 1 chr12 -120806483 - 120811983 120806983

Transcription Factor Binding Sites

 
Download all TFBS in the MSI1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 120809040 120809059 1.0E-05 CTGAACTTAAAAAGGGTCAT 20
Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX - 120808855 120808865 3.0E-06 GGGACACAAAC 11
FOXA1_MA0148.1 JASPAR - 120803486 120803496 9.0E-06 TGTTTGCTCAC 11
ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 120805159 120805170 7.0E-06 TGTTGTCCCACA 12
NFYA_MA0060.1 JASPAR + 120803975 120803990 6.0E-06 ACCAGCCAATCGCAGG 16
Hic1_C2H2_DBD_monomer_9_1 SELEX + 120805193 120805201 4.0E-06 ATGCCAACC 9
NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 120805092 120805105 8.0E-06 AAGTAGAAAAGTCA 14
SOX14_HMG_DBD_dimeric_13_1 SELEX - 120805869 120805881 1.0E-05 TCACTTTCATGGA 13
RORA_1_MA0071.1 JASPAR - 120803570 120803579 7.0E-06 TTCTAGGTCA 10
V_TCFE2A_04_M02927 TRANSFAC + 120805915 120805931 7.0E-06 AGAGGCAGATGGTTACA 17
V_NF1A_Q6_M02103 TRANSFAC + 120803584 120803599 1.0E-06 TGGGCCTCTTGCCAAG 16
V_RORA1_01_M00156 TRANSFAC - 120803569 120803581 2.0E-06 GTTTCTAGGTCAA 13
V_RORA1_01_M00156 TRANSFAC + 120809047 120809059 9.0E-06 TAAAAAGGGTCAT 13
V_IK_Q5_M01169 TRANSFAC - 120808518 120808527 5.0E-06 GTTGGGAGGG 10
V_TAL1_Q6_M00993 TRANSFAC + 120805107 120805116 8.0E-06 TCCATCTGCC 10
V_GC_01_M00255 TRANSFAC - 120808052 120808065 9.0E-06 ATGGGGTGGAGCTT 14
V_ZFP410_03_M02832 TRANSFAC - 120808058 120808074 7.0E-06 TCCAATGGGATGGGGTG 17
V_NFAT_Q6_M00302 TRANSFAC - 120808846 120808857 7.0E-06 AACAGGAAAAAG 12
V_ZBP89_Q4_M01816 TRANSFAC + 120807086 120807095 6.0E-06 TCCTCCCCCC 10
V_MAZ_Q6_01_M02023 TRANSFAC - 120808513 120808526 3.0E-06 TTGGGAGGGAGGGG 14
V_BCL6_Q3_M01171 TRANSFAC - 120803572 120803581 1.0E-06 GTTTCTAGGT 10
V_HIC1_05_M02763 TRANSFAC + 120805190 120805205 3.0E-06 TGAATGCCAACCAAGC 16
V_ERR1_Q3_M01841 TRANSFAC + 120803567 120803581 1.0E-06 ACTTGACCTAGAAAC 15
V_IK3_01_M00088 TRANSFAC + 120808783 120808795 4.0E-06 TTCTGGGAATGCT 13
V_CTCF_01_M01200 TRANSFAC - 120805124 120805143 5.0E-06 AGACCCTGCAGGGGGCGCTG 20
V_ISGF4G_04_M02875 TRANSFAC - 120803436 120803449 5.0E-06 CGAAAACAGAACTG 14
V_SOX17_04_M02904 TRANSFAC + 120803957 120803973 6.0E-06 GACGTCATTCATAAGTT 17
V_GLI3_01_M01596 TRANSFAC - 120808913 120808923 7.0E-06 GTGGGTGGCCC 11
V_GCNF_01_M00526 TRANSFAC - 120803562 120803579 9.0E-06 TTCTAGGTCAAGTCCCAT 18
V_TAL1_01_M01591 TRANSFAC + 120804055 120804067 4.0E-06 CTGGCTTCTCTCT 13
V_TAL1_01_M01591 TRANSFAC - 120808736 120808748 1.0E-06 CTTTCTTCTCTGC 13
V_ZBTB3_03_M02825 TRANSFAC + 120808089 120808105 7.0E-06 CTACCCACTGCATTTGG 17
V_EBNA1_01_M01745 TRANSFAC + 120806995 120807010 2.0E-06 GACAGGCCATGCTGCC 16
V_NFY_01_M00287 TRANSFAC + 120803975 120803990 5.0E-06 ACCAGCCAATCGCAGG 16
V_ASCL2_04_M02841 TRANSFAC + 120808056 120808071 4.0E-06 TCCACCCCATCCCATT 16
V_NFYA_Q5_M02106 TRANSFAC + 120803977 120803990 3.0E-06 CAGCCAATCGCAGG 14
V_AR_Q2_M00447 TRANSFAC + 120803428 120803442 5.0E-06 AGTAGGCTCAGTTCT 15
V_NF1_Q6_M00193 TRANSFAC - 120803583 120803600 4.0E-06 GCTTGGCAAGAGGCCCAG 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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