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Construction and Validation

Optimal Promoter Size

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MEF2C Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4208 chr5 + 88194922 - 88204922 0 Transcription Factor Binding Sites   Download all TFBS in the MEF2C promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Klf4_MA0039.2 JASPAR + 88195138 88195147 1.0E-05 AGGGTGGGGC 10 MEF2A_MA0052.1 JASPAR + 88195118 88195127 8.0E-06 CTACTTATAG 10 V_AR_02_M00953 TRANSFAC - 88195397 88195423 2.0E-06 ATTAGAGTTAAAGAGTGTTCTTCAAAG 27 V_MEF2_02_M00231 TRANSFAC - 88195113 88195134 4.0E-06 CCTATTGCTATAAGTAGCCCAC 22 V_HELIOSA_01_M01003 TRANSFAC + 88195129 88195139 5.0E-06 AATAGGGATAG 11 V_TRF1_01_M01237 TRANSFAC + 88195130 88195144 7.0E-06 ATAGGGATAGGGTGG 15 V_PR_01_M00954 TRANSFAC - 88195397 88195423 2.0E-06 ATTAGAGTTAAAGAGTGTTCTTCAAAG 27 V_RSRFC4_Q2_M00407 TRANSFAC - 88195114 88195130 9.0E-06 TTGCTATAAGTAGCCCA 17 V_MEF2_04_M00233 TRANSFAC - 88195113 88195134 2.0E-06 CCTATTGCTATAAGTAGCCCAC 22

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.