Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C7orf61 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 402573 chromosome 7 open reading frame 61 chr7 - 100061394 - 100066894 100061894 Transcription Factor Binding Sites   Download all TFBS in the C7orf61 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR + 100065811 100065820 2.0E-06 GGGAATTCCC 10 NF-kappaB_MA0061.1 JASPAR - 100065811 100065820 2.0E-06 GGGAATTCCC 10 MYF6_bHLH_full_dimeric_10_1 SELEX + 100060901 100060910 3.0E-06 AACAATTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 100060901 100060910 3.0E-06 AACAATTGTT 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 100063817 100063827 1.0E-05 GCCCCGCCCCC 11 SRY_HMG_DBD_dimeric_13_2 SELEX - 100065715 100065727 5.0E-06 TGTATATCTTTCA 13 ZBTB7B_C2H2_full_monomeric_12_1 SELEX + 100063890 100063901 3.0E-06 GCAACCACCAAA 12 SP1_MA0079.2 JASPAR + 100063818 100063827 7.0E-06 CCCCGCCCCC 10 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX + 100062112 100062124 2.0E-06 TGCCACTTCATCA 13 ZBTB7C_C2H2_full_monomeric_12_1 SELEX + 100063890 100063901 2.0E-06 GCAACCACCAAA 12 CREB3L1_bZIP_full_dimeric_14_1 SELEX + 100062111 100062124 7.0E-06 GTGCCACTTCATCA 14 Myf_MA0055.1 JASPAR + 100061061 100061072 5.0E-06 CGGCAGCTGCAG 12 Tp53_p53l_DBD_dimeric_17_1 SELEX + 100060902 100060918 3.0E-06 ACAATTGTTGAACAAGT 17 IRF3_IRF_full_trimeric_21_1 SELEX + 100062122 100062142 8.0E-06 TCAAAGAGGAATCTGAAATTC 21 V_MINI20_B_M00324 TRANSFAC + 100063818 100063838 4.0E-06 CCCCGCCCCCAAGCAGCCACC 21 V_NFKAPPAB65_01_M00052 TRANSFAC + 100065811 100065820 1.0E-05 GGGAATTCCC 10 V_NFKAPPAB65_01_M00052 TRANSFAC - 100065811 100065820 1.0E-05 GGGAATTCCC 10 V_NFKB_C_M00208 TRANSFAC + 100065810 100065821 6.0E-06 CGGGAATTCCCA 12 V_KLF15_Q2_M01714 TRANSFAC + 100065918 100065931 4.0E-06 GGGGAGGGGCGTGG 14 V_DBX1_01_M01483 TRANSFAC + 100062032 100062048 1.0E-05 TAACAAACTAATAAGCA 17 V_GAF_Q6_M01209 TRANSFAC - 100062126 100062136 9.0E-06 CAGATTCCTCT 11 V_NFKB_Q6_01_M00774 TRANSFAC + 100065806 100065821 1.0E-05 TGGGCGGGAATTCCCA 16 V_NFKB_Q6_01_M00774 TRANSFAC - 100065810 100065825 2.0E-06 TGTCTGGGAATTCCCG 16 V_SOX30_03_M02804 TRANSFAC - 100060899 100060914 3.0E-06 GTTCAACAATTGTTTC 16 V_NF1A_Q6_M02103 TRANSFAC - 100065853 100065868 3.0E-06 TGGGATTGGTGCCAGG 16 V_ZEC_01_M01081 TRANSFAC - 100063890 100063902 4.0E-06 CTTTGGTGGTTGC 13 V_ETS_B_M00340 TRANSFAC + 100060894 100060907 4.0E-06 GCCAGGAAACAATT 14 V_SOX5_01_M00042 TRANSFAC - 100062102 100062111 3.0E-06 CTAACAATAA 10 V_FOXJ2_02_M00423 TRANSFAC - 100062095 100062108 2.0E-06 ACAATAATACCTAT 14 V_SP1_Q6_01_M00931 TRANSFAC - 100063817 100063826 4.0E-06 GGGGCGGGGC 10 V_SP1_03_M02281 TRANSFAC + 100063818 100063827 7.0E-06 CCCCGCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC - 100060864 100060873 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC - 100063811 100063821 3.0E-06 GGGGCGGGGGG 11 V_NRSE_B_M00325 TRANSFAC + 100065793 100065813 2.0E-06 TTCAGCTCCTCGGTGGGCGGG 21 V_BCL6_02_M01185 TRANSFAC - 100062138 100062151 2.0E-06 AGCTTTCCTGAATT 14 V_GC_01_M00255 TRANSFAC - 100063815 100063828 3.0E-06 TGGGGGCGGGGCGG 14 V_TCF3_04_M02816 TRANSFAC + 100062116 100062132 4.0E-06 ACTTCATCAAAGAGGAA 17 V_MYF_01_M01302 TRANSFAC + 100061061 100061072 5.0E-06 CGGCAGCTGCAG 12 V_FKLF_Q5_M01837 TRANSFAC + 100063712 100063721 2.0E-06 GGGGTGGGAG 10 V_SOX1_04_M02906 TRANSFAC + 100062099 100062113 0.0E+00 GTATTATTGTTAGTG 15 V_IRF2_01_M00063 TRANSFAC + 100063087 100063099 1.0E-05 CAAGAGCGAAACT 13 V_IRX4_01_M01410 TRANSFAC - 100060907 100060923 6.0E-06 TGATTACTTGTTCAACA 17 V_SP1_Q6_M00196 TRANSFAC - 100063816 100063828 1.0E-06 TGGGGGCGGGGCG 13 V_FOXK1_04_M02856 TRANSFAC - 100062097 100062111 1.0E-06 CTAACAATAATACCT 15 V_NKX25_Q5_M01043 TRANSFAC + 100062112 100062121 6.0E-06 TGCCACTTCA 10 V_MATH1_Q2_M01716 TRANSFAC + 100065899 100065908 6.0E-06 TCAGCTGGTG 10 V_SOX18_03_M02801 TRANSFAC + 100060901 100060916 5.0E-06 AACAATTGTTGAACAA 16 V_ASCL2_03_M02737 TRANSFAC + 100061059 100061075 4.0E-06 CTCGGCAGCTGCAGTAG 17 V_AP4_Q5_M00175 TRANSFAC + 100065898 100065907 6.0E-06 GTCAGCTGGT 10 V_MEF2_04_M00233 TRANSFAC - 100062097 100062118 5.0E-06 AGTGGCACTAACAATAATACCT 22 V_NFKAPPAB50_01_M00051 TRANSFAC + 100065811 100065820 6.0E-06 GGGAATTCCC 10 V_NFKAPPAB50_01_M00051 TRANSFAC - 100065811 100065820 6.0E-06 GGGAATTCCC 10 V_DAX1_01_M01248 TRANSFAC - 100060976 100060995 8.0E-06 CAGCTGGAAGGTCAGCACCA 20 V_HIC1_02_M01072 TRANSFAC + 100063752 100063766 2.0E-06 ACCGTGTGCCCGGGG 15 V_IK3_01_M00088 TRANSFAC - 100065812 100065824 6.0E-06 GTCTGGGAATTCC 13 V_IRF7_01_M00453 TRANSFAC + 100062127 100062144 1.0E-06 GAGGAATCTGAAATTCAG 18 V_TFIII_Q6_M00706 TRANSFAC + 100060923 100060931 6.0E-06 AGAGGGAGG 9 V_TFIII_Q6_M00706 TRANSFAC + 100060956 100060964 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC + 100063812 100063822 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 100063817 100063827 1.0E-06 GCCCCGCCCCC 11 V_ZFP105_04_M02931 TRANSFAC - 100060901 100060917 4.0E-06 CTTGTTCAACAATTGTT 17 V_MINI19_B_M00323 TRANSFAC + 100063818 100063838 3.0E-06 CCCCGCCCCCAAGCAGCCACC 21 V_SOX15_03_M02799 TRANSFAC - 100060899 100060915 8.0E-06 TGTTCAACAATTGTTTC 17 V_SOX15_03_M02799 TRANSFAC - 100063902 100063918 5.0E-06 TGGGAAACAATAAGGTC 17 V_PITX2_Q2_M00482 TRANSFAC - 100060863 100060873 1.0E-06 TGTAATCCCAG 11 V_ZFP281_01_M01597 TRANSFAC - 100063818 100063828 6.0E-06 TGGGGGCGGGG 11 V_SOX21_04_M02907 TRANSFAC + 100060900 100060916 7.0E-06 AAACAATTGTTGAACAA 17 V_NFKAPPAB_01_M00054 TRANSFAC + 100065811 100065820 2.0E-06 GGGAATTCCC 10 V_NFKAPPAB_01_M00054 TRANSFAC - 100065811 100065820 2.0E-06 GGGAATTCCC 10 V_EKLF_Q5_M01874 TRANSFAC + 100063775 100063784 5.0E-06 CCACACCCAG 10 V_SRY_05_M02917 TRANSFAC + 100060895 100060911 4.0E-06 CCAGGAAACAATTGTTG 17 V_SP1_Q2_01_M00933 TRANSFAC + 100063818 100063827 4.0E-06 CCCCGCCCCC 10 V_SOX5_07_M02909 TRANSFAC + 100060899 100060915 1.0E-06 GAAACAATTGTTGAACA 17 V_SP1_Q4_01_M00932 TRANSFAC - 100063816 100063828 3.0E-06 TGGGGGCGGGGCG 13 V_TCF4_01_M01705 TRANSFAC - 100062120 100062128 5.0E-06 TCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.