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C9orf139 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 401563 chromosome 9 open reading frame 139 chr9 + 139916915 - 139922415 139921915 Transcription Factor Binding Sites   Download all TFBS in the C9orf139 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 139923983 139924001 0.0E+00 TGGCCACCAGAGGGAGCTA 19 SP3_C2H2_DBD_monomeric_11_1 SELEX + 139925132 139925142 6.0E-06 CCCACACCCAC 11 NFIA_NFI_full_dimeric_15_1 SELEX + 139925434 139925448 1.0E-06 CTGGCACAGTGCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX - 139925434 139925448 1.0E-06 CTGGCACTGTGCCAG 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 139922690 139922700 1.0E-05 GCCCCGCCCCC 11 ESR2_MA0258.1 JASPAR - 139923451 139923468 1.0E-05 TGGGGTCAGCCTGTCCTC 18 Zfp423_MA0116.1 JASPAR - 139923462 139923476 4.0E-06 GCCACCCATGGGGTC 15 RFX4_RFX_DBD_dimeric_16_1 SELEX + 139920245 139920260 1.0E-06 CATTGCTATAGCAACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 139920245 139920260 3.0E-06 CGTTGCTATAGCAATG 16 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 139923755 139923766 5.0E-06 GTCTTTCCCACA 12 HINFP1_C2H2_full_monomeric_12_1 SELEX - 139923080 139923091 5.0E-06 CAGCGTCCGCTC 12 NFIX_NFI_full_dimeric_15_2 SELEX + 139925434 139925448 1.0E-06 CTGGCACAGTGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 139925434 139925448 1.0E-06 CTGGCACTGTGCCAG 15 RUNX3_RUNX_DBD_dimeric_16_1 SELEX - 139925213 139925228 9.0E-06 TGACCGCTACCCACAC 16 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 139923687 139923698 5.0E-06 AGCCTCAAGGCA 12 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 139920245 139920260 1.0E-06 CATTGCTATAGCAACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 139920245 139920260 0.0E+00 CGTTGCTATAGCAATG 16 SP1_MA0079.2 JASPAR - 139922690 139922699 7.0E-06 CCCCGCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX + 139920178 139920194 4.0E-06 CCAGCCCCGCCCACACC 17 CTCF_C2H2_full_monomeric_17_1 SELEX - 139923984 139924000 6.0E-06 AGCTCCCTCTGGTGGCC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 139920181 139920191 1.0E-05 GCCCCGCCCAC 11 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 139923847 139923859 9.0E-06 AGCCCCGGGGGCT 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 139923847 139923859 8.0E-06 AGCCCCCGGGGCT 13 RFX2_RFX_DBD_dimeric_16_1 SELEX + 139920245 139920260 1.0E-06 CATTGCTATAGCAACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 139920245 139920260 1.0E-06 CGTTGCTATAGCAATG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 139920245 139920260 0.0E+00 CATTGCTATAGCAACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 139920245 139920260 1.0E-06 CGTTGCTATAGCAATG 16 NFIB_NFI_full_dimeric_15_1 SELEX + 139925434 139925448 1.0E-06 CTGGCACAGTGCCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX - 139925434 139925448 1.0E-06 CTGGCACTGTGCCAG 15 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 139923757 139923773 9.0E-06 CTTTCCCACAAGCCACA 17 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 139923687 139923698 4.0E-06 AGCCTCAAGGCA 12 IRF3_IRF_full_trimeric_21_1 SELEX - 139924121 139924141 6.0E-06 TCAAAACAAAAACCAAAACAG 21 NFE2L2_MA0150.1 JASPAR + 139922275 139922285 9.0E-06 GTGACTCAGCC 11 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 139924127 139924140 7.0E-06 CAAAACAAAAACCA 14 V_MINI20_B_M00324 TRANSFAC + 139926879 139926899 4.0E-06 CCCAGCCCCCACCCAGCTACC 21 V_FOXP1_01_M00987 TRANSFAC + 139924121 139924140 9.0E-06 CTGTTTTGGTTTTTGTTTTG 20 V_AP2ALPHA_Q6_M01857 TRANSFAC + 139922892 139922902 6.0E-06 AGCCTCCGGGC 11 V_ZFX_01_M01593 TRANSFAC - 139922618 139922633 3.0E-06 GAGCGGGCCGCGGCGC 16 V_NF1A_Q6_M02103 TRANSFAC - 139925433 139925448 4.0E-06 CTGGCACTGTGCCAGT 16 V_SP1_Q6_01_M00931 TRANSFAC + 139922691 139922700 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 139924705 139924714 4.0E-06 GGGGCGGGGC 10 V_ZTA_Q2_M00711 TRANSFAC - 139925354 139925366 4.0E-06 TGACTTTGGCTCA 13 V_ZFP740_03_M02834 TRANSFAC + 139926652 139926667 4.0E-06 TCCCCACCCCCATCTC 16 V_FOXO3A_Q1_M01137 TRANSFAC - 139924130 139924141 8.0E-06 TCAAAACAAAAA 12 V_SP1_03_M02281 TRANSFAC - 139922690 139922699 7.0E-06 CCCCGCCCCC 10 V_TR4_Q2_M01725 TRANSFAC + 139925041 139925051 1.0E-06 CCTGACCTCTG 11 V_NERF_Q2_M00531 TRANSFAC - 139925030 139925047 2.0E-06 GGTCAGGAAGCAGGGGTG 18 V_SP1_02_M01303 TRANSFAC - 139925025 139925035 5.0E-06 GGGGTGGGGGG 11 V_ELF4_04_M02850 TRANSFAC - 139924127 139924143 9.0E-06 TCTCAAAACAAAAACCA 17 V_ZNF219_01_M01122 TRANSFAC + 139925023 139925034 2.0E-06 CACCCCCCACCC 12 V_GC_01_M00255 TRANSFAC - 139920179 139920192 1.0E-06 TGTGGGCGGGGCTG 14 V_BEL1_B_M00312 TRANSFAC + 139924247 139924274 6.0E-06 AAGTAGCTGAGACCACAAGCGTGAGCCA 28 V_SOX8_04_M02912 TRANSFAC + 139925316 139925329 7.0E-06 TCATTCATGCCAGT 14 V_E12_Q6_M00693 TRANSFAC - 139923387 139923397 4.0E-06 AGCAGGTGCCA 11 V_KROX_Q6_M00982 TRANSFAC + 139920183 139920196 4.0E-06 CCCGCCCACACCCG 14 V_KROX_Q6_M00982 TRANSFAC - 139922685 139922698 9.0E-06 CCCGCCCCCGCGCG 14 V_SP1_Q6_M00196 TRANSFAC - 139920180 139920192 6.0E-06 TGTGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC + 139922689 139922701 2.0E-06 CGGGGGCGGGGCG 13 V_MAZ_Q6_01_M02023 TRANSFAC + 139924916 139924929 6.0E-06 CAGGGTGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 139924975 139924988 9.0E-06 GTGGGAGGGAGGTA 14 V_AP2BETA_Q3_M01858 TRANSFAC + 139922490 139922505 0.0E+00 GCCTCGGGCTGAGGGC 16 V_AP2BETA_Q3_M01858 TRANSFAC - 139922653 139922668 0.0E+00 GCGGCGGGCTGCGGGG 16 V_AP2BETA_Q3_M01858 TRANSFAC - 139923674 139923689 2.0E-06 GCTGCGGGCTGGGGTG 16 V_AP2BETA_Q3_M01858 TRANSFAC - 139926876 139926891 6.0E-06 GGTGGGGGCTGGGGGG 16 V_EGR1_Q6_M01873 TRANSFAC + 139922688 139922697 4.0E-06 GCGGGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC - 139922778 139922787 4.0E-06 GCGGGGGCGG 10 V_SREBP_Q6_M01168 TRANSFAC + 139924019 139924033 5.0E-06 CCTGTCACCCCAGAC 15 V_SREBP_Q6_M01168 TRANSFAC + 139925279 139925293 7.0E-06 CCTGTCACGCCAGGC 15 V_NFE4_Q5_M02105 TRANSFAC - 139923089 139923100 8.0E-06 GCCCCTCGCCAG 12 V_ZBRK1_01_M01105 TRANSFAC - 139923832 139923846 3.0E-06 GGGGCACAGGGCTTG 15 V_MUSCLE_INI_B_M00321 TRANSFAC + 139926879 139926899 9.0E-06 CCCAGCCCCCACCCAGCTACC 21 V_RREB1_01_M00257 TRANSFAC + 139925131 139925144 9.0E-06 ACCCACACCCACCT 14 V_STAF_02_M00264 TRANSFAC + 139923757 139923777 7.0E-06 CTTTCCCACAAGCCACAGCCA 21 V_CTCF_02_M01259 TRANSFAC + 139923980 139923999 0.0E+00 CACTGGCCACCAGAGGGAGC 20 V_CTCF_02_M01259 TRANSFAC + 139926701 139926720 9.0E-06 GTACAGCCACAAGAGGGATG 20 V_SOX11_03_M02795 TRANSFAC - 139924126 139924142 9.0E-06 CTCAAAACAAAAACCAA 17 V_CTCF_01_M01200 TRANSFAC + 139923982 139924001 0.0E+00 CTGGCCACCAGAGGGAGCTA 20 V_CTCF_01_M01200 TRANSFAC + 139926703 139926722 5.0E-06 ACAGCCACAAGAGGGATGCC 20 V_FOXO1_Q5_M01216 TRANSFAC - 139924132 139924140 8.0E-06 CAAAACAAA 9 V_SOX17_04_M02904 TRANSFAC + 139925312 139925328 5.0E-06 GCTCTCATTCATGCCAG 17 V_SP4_Q5_M01273 TRANSFAC + 139920181 139920191 9.0E-06 GCCCCGCCCAC 11 V_SP4_Q5_M01273 TRANSFAC - 139922690 139922700 1.0E-06 GCCCCGCCCCC 11 V_MINI19_B_M00323 TRANSFAC + 139926879 139926899 0.0E+00 CCCAGCCCCCACCCAGCTACC 21 V_GFI1_Q6_M01067 TRANSFAC + 139926486 139926498 6.0E-06 TCAAATCACGGCA 13 V_LBP9_01_M01592 TRANSFAC + 139924669 139924685 2.0E-06 CCAGAACAAGCTGGTTT 17 V_MAZR_01_M00491 TRANSFAC - 139926650 139926662 9.0E-06 GGGGGTGGGGACA 13 V_TAL1_01_M01591 TRANSFAC + 139923699 139923711 1.0E-06 CTTGCTTTTCTCT 13 V_FOXL1_02_M02857 TRANSFAC - 139924129 139924144 2.0E-06 GTCTCAAAACAAAAAC 16 V_GFI1B_01_M01058 TRANSFAC + 139926487 139926498 1.0E-06 CAAATCACGGCA 12 V_HDX_01_M01333 TRANSFAC - 139925103 139925119 2.0E-06 GTGTCGAAATCAAACCA 17 V_ESRRA_04_M02852 TRANSFAC + 139920154 139920170 4.0E-06 AGGCAGGGGTCACAGCA 17 V_TFIIA_Q6_M00707 TRANSFAC - 139925185 139925196 5.0E-06 TCTATGAGGACC 12 V_FPM315_01_M01587 TRANSFAC + 139920276 139920287 6.0E-06 CTGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 139920279 139920290 3.0E-06 GGAGGAGGAGGA 12 V_NRF2_Q4_M00821 TRANSFAC - 139922274 139922286 1.0E-05 CGGCTGAGTCACG 13 V_P53_01_M00034 TRANSFAC - 139926769 139926788 8.0E-06 GGACATCTCTGGGCCTCTCT 20 V_ZFP281_01_M01597 TRANSFAC - 139926653 139926663 1.0E-06 TGGGGGTGGGG 11 V_EGR1_06_M02744 TRANSFAC - 139922685 139922698 7.0E-06 CCCGCCCCCGCGCG 14 V_EGR1_06_M02744 TRANSFAC + 139922777 139922790 1.0E-06 CCCGCCCCCGCTTA 14 V_SOX14_04_M02901 TRANSFAC - 139924894 139924910 6.0E-06 ATCTTGGGTGGGTGAAG 17 V_ZFP281_04_M02831 TRANSFAC + 139926651 139926665 5.0E-06 GTCCCCACCCCCATC 15 V_SRF_06_M02916 TRANSFAC - 139924126 139924142 9.0E-06 CTCAAAACAAAAACCAA 17 V_PUR1_Q4_M01721 TRANSFAC - 139923060 139923068 6.0E-06 GGGACAGTG 9 V_PUR1_Q4_M01721 TRANSFAC - 139926647 139926655 6.0E-06 GGGACAGTG 9 V_VDR_Q3_M00444 TRANSFAC - 139924023 139924037 9.0E-06 GGGTGTCTGGGGTGA 15 V_PLAGL1_03_M02786 TRANSFAC + 139923395 139923410 9.0E-06 GCTGGGGCGCCCCGGG 16 V_EKLF_Q5_M01874 TRANSFAC - 139924916 139924925 9.0E-06 CCCCACCCTG 10 V_EKLF_Q5_M01874 TRANSFAC + 139925133 139925142 9.0E-06 CCACACCCAC 10 V_SOX2_Q6_M01272 TRANSFAC + 139924126 139924141 5.0E-06 TTGGTTTTTGTTTTGA 16 V_CTF1_01_M01196 TRANSFAC - 139923089 139923102 8.0E-06 TGGCCCCTCGCCAG 14 V_CTF1_01_M01196 TRANSFAC - 139925434 139925447 2.0E-06 TGGCACTGTGCCAG 14 V_CTF1_01_M01196 TRANSFAC + 139925435 139925448 2.0E-06 TGGCACAGTGCCAG 14 V_NFE2L2_01_M02263 TRANSFAC + 139922275 139922285 9.0E-06 GTGACTCAGCC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC - 139926652 139926665 5.0E-06 GATGGGGGTGGGGA 14 V_SP1_Q4_01_M00932 TRANSFAC - 139920180 139920192 5.0E-06 TGTGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC + 139922689 139922701 3.0E-06 CGGGGGCGGGGCG 13 V_LTF_Q6_M01692 TRANSFAC + 139923695 139923703 6.0E-06 GGCACTTGC 9 V_SREBP1_Q5_M01173 TRANSFAC + 139924019 139924033 9.0E-06 CCTGTCACCCCAGAC 15 V_RNF96_01_M01199 TRANSFAC + 139923681 139923690 7.0E-06 GCCCGCAGCC 10 TLX1_NFIC_MA0119.1 JASPAR - 139923089 139923102 8.0E-06 TGGCCCCTCGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR - 139925434 139925447 2.0E-06 TGGCACTGTGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR + 139925435 139925448 2.0E-06 TGGCACAGTGCCAG 14 V_COUP_DR1_Q6_M00765 TRANSFAC - 139924003 139924015 5.0E-06 TGACCTGTGCCTT 13 V_COUP_DR1_Q6_M00765 TRANSFAC + 139925043 139925055 7.0E-06 TGACCTCTGTGCC 13 V_DEC_Q1_M00997 TRANSFAC + 139923572 139923584 2.0E-06 CCTCAAGTGAATG 13 V_SMAD1_01_M01590 TRANSFAC - 139924129 139924140 4.0E-06 CAAAACAAAAAC 12 V_RFX1_02_M00281 TRANSFAC + 139920244 139920261 1.0E-05 CCATTGCTATAGCAACGG 18 V_ESR2_01_M02377 TRANSFAC - 139923451 139923468 1.0E-05 TGGGGTCAGCCTGTCCTC 18 V_AP2_Q3_M00800 TRANSFAC + 139922489 139922504 6.0E-06 GGCCTCGGGCTGAGGG 16 V_AP2_Q3_M00800 TRANSFAC - 139924036 139924051 2.0E-06 GCCCGCAGGCTGGAGG 16

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