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WDR38 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 401551 WD repeat domain 38 chr9 + 127610695 - 127616195 127615695 Transcription Factor Binding Sites   Download all TFBS in the WDR38 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 127615486 127615504 0.0E+00 CGGCCACTAGAGGGCGCGC 19 NF-kappaB_MA0061.1 JASPAR - 127615567 127615576 6.0E-06 GGGACTTCCC 10 SOX10_HMG_full_dimeric_16_1 SELEX - 127612535 127612550 2.0E-06 AACCATGCTCACTGTT 16 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 127612288 127612301 6.0E-06 CTGGTTAAAGGTCA 14 HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 127612179 127612189 2.0E-06 GCTCATAAAAT 11 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 127612179 127612190 7.0E-06 GCTCATAAAATT 12 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 127612288 127612298 1.0E-06 GTTAAAGGTCA 11 SOX9_HMG_full_dimeric_16_1 SELEX - 127612535 127612550 8.0E-06 AACCATGCTCACTGTT 16 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 127614497 127614508 5.0E-06 ACTTAAAATAGC 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 127615701 127615716 6.0E-06 GATTACCATGGAGACC 16 SOX8_HMG_DBD_dimeric_16_1 SELEX + 127612535 127612550 7.0E-06 AACAGTGAGCATGGTT 16 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 127612288 127612301 3.0E-06 CTGGTTAAAGGTCA 14 HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 127612179 127612189 1.0E-06 GCTCATAAAAT 11 ZNF238_C2H2_full_monomeric_13_1 SELEX - 127618774 127618786 8.0E-06 GTCCCAGATGTGT 13 ZNF238_C2H2_full_monomeric_13_1 SELEX - 127619037 127619049 1.0E-06 CTTCCAGATGTGG 13 NR2F1_MA0017.1 JASPAR + 127612288 127612301 1.0E-06 TGACCTTTAACCAG 14 POU4F3_POU_DBD_monomeric_16_1 SELEX - 127612180 127612195 9.0E-06 CTGCAAATTTTATGAG 16 MEF2B_MADS_full_dimeric_12_1 SELEX + 127614497 127614508 3.0E-06 ACTTAAAATAGC 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 127614453 127614464 8.0E-06 TGACAGCTTTGA 12 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX + 127612180 127612189 9.0E-06 CTCATAAAAT 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 127615701 127615716 6.0E-06 GGTCTCCATGGTAATC 16 MEF2A_MA0052.1 JASPAR - 127614498 127614507 7.0E-06 CTATTTTAAG 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 127612180 127612189 6.0E-06 CTCATAAAAT 10 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 127612287 127612301 4.0E-06 CTGGTTAAAGGTCAT 15 znf143_MA0088.1 JASPAR + 127618392 127618411 5.0E-06 GCCTCTCCAGGCTTCCTTGC 20 CTCF_C2H2_full_monomeric_17_1 SELEX + 127615487 127615503 0.0E+00 CGCGCCCTCTAGTGGCC 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX + 127615090 127615106 9.0E-06 TGGCACATTTTGTGCTG 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX - 127615090 127615106 6.0E-06 CAGCACAAAATGTGCCA 17 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 127612288 127612301 7.0E-06 CTGGTTAAAGGTCA 14 SOX7_HMG_full_dimeric_16_1 SELEX + 127612535 127612550 2.0E-06 AACAGTGAGCATGGTT 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 127615701 127615716 6.0E-06 GGTCTCCATGGTAATC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 127615701 127615716 7.0E-06 GATTACCATGGAGACC 16 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX + 127612179 127612190 2.0E-06 GCTCATAAAATT 12 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX - 127612287 127612297 4.0E-06 TTAAAGGTCAT 11 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 127612179 127612189 2.0E-06 GCTCATAAAAT 11 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 127612179 127612189 7.0E-06 GCTCATAAAAT 11 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX - 127615116 127615124 2.0E-06 TGCTGTTAA 9 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 127612180 127612189 6.0E-06 CTCATAAAAT 10 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX + 127612180 127612188 1.0E-05 CTCATAAAA 9 RORA_1_MA0071.1 JASPAR - 127612288 127612297 7.0E-06 TTAAAGGTCA 10 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 127612179 127612189 5.0E-06 GCTCATAAAAT 11 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 127612288 127612301 4.0E-06 CTGGTTAAAGGTCA 14 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 127617235 127617249 5.0E-06 GGGGACAGAGGTTCA 15 V_HOXA9_01_M01351 TRANSFAC + 127612177 127612193 9.0E-06 CCGCTCATAAAATTTGC 17 V_NFKB_C_M00208 TRANSFAC - 127615566 127615577 7.0E-06 AGGGACTTCCCG 12 V_TGIF_01_M00418 TRANSFAC + 127614457 127614467 8.0E-06 AGCTGTCATTG 11 V_TBX15_01_M01263 TRANSFAC + 127614457 127614475 6.0E-06 AGCTGTCATTGTCGCTCCC 19 V_AHR_Q5_M00778 TRANSFAC + 127612315 127612325 2.0E-06 CTTGCGTGCGT 11 V_HSF1_Q6_M01023 TRANSFAC - 127614528 127614544 0.0E+00 TTGCCAGAAACTTCTCA 17 V_SOX14_05_M02902 TRANSFAC - 127612334 127612348 2.0E-06 CTCACACAATGAGTT 15 V_NF1_Q6_01_M00806 TRANSFAC + 127612268 127612284 9.0E-06 CTGGATGGGGGCCAAGA 17 V_RORA1_01_M00156 TRANSFAC - 127612287 127612299 8.0E-06 GGTTAAAGGTCAT 13 V_SP1_Q6_01_M00931 TRANSFAC - 127615691 127615700 4.0E-06 GGGGCGGGGC 10 V_MEF2_02_M00231 TRANSFAC + 127614491 127614512 1.0E-06 TCTGGGACTTAAAATAGCAGGA 22 V_NR2F2_03_M02783 TRANSFAC - 127612284 127612299 2.0E-06 GGTTAAAGGTCATCTT 16 V_EGR_Q6_M00807 TRANSFAC - 127618369 127618379 6.0E-06 GTGGGGGCAGC 11 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 127612287 127612299 3.0E-06 ATGACCTTTAACC 13 V_RP58_01_M00532 TRANSFAC + 127618773 127618784 5.0E-06 TACACATCTGGG 12 V_RP58_01_M00532 TRANSFAC + 127619036 127619047 2.0E-06 TCCACATCTGGA 12 V_P50P50_Q3_M01223 TRANSFAC - 127615566 127615578 1.0E-06 AAGGGACTTCCCG 13 V_P53_DECAMER_Q2_M00761 TRANSFAC + 127617253 127617262 7.0E-06 AAACAAGTCC 10 V_AP2_Q6_01_M00915 TRANSFAC + 127618418 127618430 4.0E-06 CAGCCCTCAGGCT 13 V_PPAR_DR1_Q2_M00763 TRANSFAC + 127612288 127612300 1.0E-06 TGACCTTTAACCA 13 V_HOXA13_03_M01430 TRANSFAC + 127612176 127612191 2.0E-06 CCCGCTCATAAAATTT 16 V_HOXC13_01_M01317 TRANSFAC + 127612176 127612191 0.0E+00 CCCGCTCATAAAATTT 16 V_MEF2A_Q6_M02024 TRANSFAC - 127614497 127614506 6.0E-06 TATTTTAAGT 10 V_CDP_04_M01344 TRANSFAC + 127612137 127612151 8.0E-06 TCATGTTGATCATTT 15 V_PAX_Q6_M00808 TRANSFAC - 127612344 127612354 8.0E-06 CTGGTACTCAC 11 V_PR_Q2_M00960 TRANSFAC - 127612122 127612131 9.0E-06 GTAAGAACAG 10 V_TGIF_02_M01346 TRANSFAC - 127614453 127614469 0.0E+00 GACAATGACAGCTTTGA 17 V_HOXB13_01_M01467 TRANSFAC + 127612177 127612192 1.0E-05 CCGCTCATAAAATTTG 16 V_ZFP410_03_M02832 TRANSFAC + 127614428 127614444 9.0E-06 GGATCTGGGATGGAGTG 17 V_COUP_01_M00158 TRANSFAC + 127612288 127612301 1.0E-06 TGACCTTTAACCAG 14 V_TEF_Q6_M00672 TRANSFAC + 127612431 127612442 7.0E-06 TTGGAAACATAA 12 V_SOX7_04_M02911 TRANSFAC + 127612333 127612354 7.0E-06 GAACTCATTGTGTGAGTACCAG 22 V_NFKB_Q6_M00194 TRANSFAC - 127615565 127615578 9.0E-06 AAGGGACTTCCCGC 14 V_SOX_Q6_M01014 TRANSFAC - 127615399 127615411 4.0E-06 CTCTTTGATACAG 13 V_TTF1_Q6_M00794 TRANSFAC - 127614582 127614593 1.0E-06 AACTCAAGAGTT 12 V_EGR1_04_M02848 TRANSFAC + 127612228 127612243 8.0E-06 ATAGAAGTGGGACTTT 16 V_EGR1_04_M02848 TRANSFAC + 127614436 127614451 3.0E-06 GATGGAGTGGGACTGC 16 V_MEF2_03_M00232 TRANSFAC + 127614491 127614512 1.0E-06 TCTGGGACTTAAAATAGCAGGA 22 V_ASCL2_03_M02737 TRANSFAC - 127612187 127612203 4.0E-06 TGTGGCAGCTGCAAATT 17 V_ASCL2_03_M02737 TRANSFAC + 127612188 127612204 6.0E-06 ATTTGCAGCTGCCACAG 17 V_CUX1_04_M02959 TRANSFAC + 127612137 127612151 8.0E-06 TCATGTTGATCATTT 15 V_NFE4_Q5_M02105 TRANSFAC - 127612356 127612367 9.0E-06 CTCCCTCCCCTG 12 V_PPARG_03_M00528 TRANSFAC - 127612288 127612304 0.0E+00 ATGCTGGTTAAAGGTCA 17 V_MEF2_04_M00233 TRANSFAC + 127614491 127614512 0.0E+00 TCTGGGACTTAAAATAGCAGGA 22 V_BBX_04_M02843 TRANSFAC + 127615110 127615126 4.0E-06 GGAATGTTAACAGCAAC 17 V_MEF2_Q6_01_M00941 TRANSFAC - 127614498 127614509 1.0E-06 TGCTATTTTAAG 12 V_HNF4_DR1_Q3_M00764 TRANSFAC + 127612288 127612300 3.0E-06 TGACCTTTAACCA 13 V_TGIF1_01_M03111 TRANSFAC - 127614453 127614469 0.0E+00 GACAATGACAGCTTTGA 17 V_CTCF_02_M01259 TRANSFAC - 127615488 127615507 0.0E+00 GAGCGGCCACTAGAGGGCGC 20 V_CTCF_01_M01200 TRANSFAC - 127615486 127615505 0.0E+00 GCGGCCACTAGAGGGCGCGC 20 V_CTCF_01_M01200 TRANSFAC - 127618368 127618387 5.0E-06 GTGGCCAGGTGGGGGCAGCC 20 V_CTCF_01_M01200 TRANSFAC - 127618477 127618496 1.0E-05 GAAGGCAGCAGAGGGCAGCC 20 V_KAISO_01_M01119 TRANSFAC - 127614504 127614513 7.0E-06 CTCCTGCTAT 10 V_SP4_Q5_M01273 TRANSFAC + 127615691 127615701 2.0E-06 GCCCCGCCCCG 11 V_ELF1_Q6_M00746 TRANSFAC - 127615728 127615739 5.0E-06 GAAAGAGGAAAC 12 V_ELF1_Q6_M00746 TRANSFAC - 127617218 127617229 7.0E-06 GCAAGAGGAAGA 12 V_MINI19_B_M00323 TRANSFAC - 127612263 127612283 9.0E-06 CTTGGCCCCCATCCAGCCGTC 21 V_DR1_Q3_M00762 TRANSFAC - 127612288 127612300 1.0E-06 TGGTTAAAGGTCA 13 V_HNF4_Q6_01_M01031 TRANSFAC - 127612287 127612300 5.0E-06 TGGTTAAAGGTCAT 14 V_ERR1_Q2_M00511 TRANSFAC - 127612286 127612299 6.0E-06 GGTTAAAGGTCATC 14 V_TEF1_Q6_03_M01817 TRANSFAC + 127615108 127615116 9.0E-06 CAGGAATGT 9 V_T3RBETA_Q6_01_M02119 TRANSFAC - 127618479 127618495 9.0E-06 AAGGCAGCAGAGGGCAG 17 V_ESRRA_03_M02748 TRANSFAC - 127612283 127612299 7.0E-06 GGTTAAAGGTCATCTTC 17 V_CEBPB_Q6_M01896 TRANSFAC + 127612221 127612230 1.0E-06 TTGTGCAATA 10 V_TITF1_Q3_M00432 TRANSFAC - 127614583 127614592 7.0E-06 ACTCAAGAGT 10 V_RARA_03_M02787 TRANSFAC - 127612284 127612299 2.0E-06 GGTTAAAGGTCATCTT 16 V_NFKAPPAB_01_M00054 TRANSFAC - 127615567 127615576 7.0E-06 GGGACTTCCC 10 V_MEF2A_05_M01301 TRANSFAC - 127614498 127614509 1.0E-06 TGCTATTTTAAG 12 V_FOXO4_01_M00472 TRANSFAC + 127617251 127617261 1.0E-05 CTAAACAAGTC 11 V_RXRLXRB_01_M01198 TRANSFAC - 127612288 127612300 1.0E-06 TGGTTAAAGGTCA 13 V_HNF4_01_M00134 TRANSFAC - 127612285 127612303 6.0E-06 TGCTGGTTAAAGGTCATCT 19 V_TR4_03_M01782 TRANSFAC - 127612288 127612300 2.0E-06 TGGTTAAAGGTCA 13 V_HSF1_Q6_01_M02017 TRANSFAC + 127614531 127614544 2.0E-06 GAAGTTTCTGGCAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.