Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

LOR Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 4014 loricrin chr1 + 153227178 - 153232678 153232178 Transcription Factor Binding Sites   Download all TFBS in the LOR promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR + 153235402 153235411 3.0E-06 GGGACTTTCC 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 153235444 153235461 2.0E-06 CTAGTTAAATGCCAATTT 18 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 153235354 153235363 9.0E-06 GCAATTAATA 10 ALX3_homeodomain_full_monomeric_10_1 SELEX + 153235313 153235322 6.0E-06 TCCAATTAAC 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 153235445 153235461 3.0E-06 TAGTTAAATGCCAATTT 17 PROX1_PROX_DBD_dimeric_12_1 SELEX + 153233422 153233433 4.0E-06 CAAGATGTCTTA 12 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX - 153228150 153228160 3.0E-06 AAGGACACATT 11 ESX1_homeodomain_full_monomeric_10_1 SELEX + 153235313 153235322 7.0E-06 TCCAATTAAC 10 MSX1_homeodomain_full_monomeric_8_1 SELEX + 153235314 153235321 7.0E-06 CCAATTAA 8 SPIB_ETS_DBD_monomeric_14_1 SELEX + 153233232 153233245 9.0E-06 GGAATGAGGAACTC 14 MSX2_homeodomain_DBD_monomeric_8_1 SELEX + 153235314 153235321 7.0E-06 CCAATTAA 8 GBX2_homeodomain_full_monomeric_10_1 SELEX + 153235313 153235322 5.0E-06 TCCAATTAAC 10 HMX3_homeodomain_DBD_monomeric_11_1 SELEX + 153235313 153235323 7.0E-06 TCCAATTAACA 11 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 153235458 153235472 7.0E-06 ATTTACTGATTTACT 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 153235458 153235472 4.0E-06 AGTAAATCAGTAAAT 15 RELA_MA0107.1 JASPAR + 153235402 153235411 6.0E-06 GGGACTTTCC 10 NFIX_NFI_full_monomeric_9_2 SELEX + 153235451 153235459 8.0E-06 AATGCCAAT 9 BSX_homeodomain_DBD_monomeric_8_1 SELEX + 153235314 153235321 7.0E-06 CCAATTAA 8 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 153235444 153235461 3.0E-06 CTAGTTAAATGCCAATTT 18 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 153235459 153235471 7.0E-06 GTAAATCAGTAAA 13 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 153235448 153235462 1.0E-06 TAAATTGGCATTTAA 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 153235449 153235461 4.0E-06 TAAATGCCAATTT 13 Msx3_homeodomain_DBD_monomeric_8_1 SELEX + 153235314 153235321 7.0E-06 CCAATTAA 8 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 153235313 153235323 5.0E-06 TCCAATTAACA 11 LBX2_homeodomain_DBD_monomeric_10_1 SELEX + 153235313 153235322 1.0E-05 TCCAATTAAC 10 IRF3_IRF_full_trimeric_21_1 SELEX - 153235411 153235431 7.0E-06 CAGGATATGAAACAGAACCTG 21 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 153235458 153235472 9.0E-06 ATTTACTGATTTACT 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 153235458 153235472 4.0E-06 AGTAAATCAGTAAAT 15 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 153235444 153235461 2.0E-06 CTAGTTAAATGCCAATTT 18 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 153235354 153235364 8.0E-06 TGCAATTAATA 11 V_NFKAPPAB65_01_M00052 TRANSFAC + 153235402 153235411 7.0E-06 GGGACTTTCC 10 V_NFKB_C_M00208 TRANSFAC + 153235401 153235412 0.0E+00 AGGGACTTTCCA 12 V_ZFP187_03_M02830 TRANSFAC + 153235349 153235362 8.0E-06 GGATGTATTAATTG 14 V_NFKB_Q6_01_M00774 TRANSFAC - 153235401 153235416 2.0E-06 AACCTGGAAAGTCCCT 16 V_APOLYA_B_M00310 TRANSFAC + 153235447 153235461 2.0E-06 GTTAAATGCCAATTT 15 V_MEQCJUN_02_M02048 TRANSFAC + 153235286 153235296 9.0E-06 AAAGAGGTCAT 11 V_GATA1_Q6_M02004 TRANSFAC - 153233427 153233441 9.0E-06 TTTTCTGATAAGACA 15 V_NF1_Q6_01_M00806 TRANSFAC + 153235444 153235460 6.0E-06 CTAGTTAAATGCCAATT 17 V_ZEC_01_M01081 TRANSFAC + 153228101 153228113 6.0E-06 GAAGCTGGGTTGT 13 V_RORA1_01_M00156 TRANSFAC + 153235284 153235296 1.0E-05 AGAAAGAGGTCAT 13 V_GATA_C_M00203 TRANSFAC - 153233426 153233436 5.0E-06 TGATAAGACAT 11 V_AREB6_04_M00415 TRANSFAC + 153235417 153235425 8.0E-06 CTGTTTCAT 9 V_PU1_Q4_M01172 TRANSFAC - 153233233 153233251 2.0E-06 AAAGTTGAGTTCCTCATTC 19 V_AP4_Q6_01_M00927 TRANSFAC - 153233366 153233374 6.0E-06 ACCAGCTGC 9 V_WT1_Q6_01_M02036 TRANSFAC - 153233963 153233972 4.0E-06 CGCCCCCGCC 10 V_HMBOX1_01_M01456 TRANSFAC + 153235439 153235455 4.0E-06 CAGCTCTAGTTAAATGC 17 V_ZFP105_03_M02827 TRANSFAC + 153235313 153235327 8.0E-06 TCCAATTAACAAGGA 15 V_RXRA_03_M02791 TRANSFAC - 153235284 153235300 9.0E-06 TTCCATGACCTCTTTCT 17 V_GATA3_05_M02859 TRANSFAC + 153235424 153235445 6.0E-06 ATATCCTGATTTTACCAGCTCT 22 V_GATA3_05_M02859 TRANSFAC + 153235458 153235479 4.0E-06 ATTTACTGATTTACTCAAGAAA 22 V_HNF1_Q6_M00790 TRANSFAC + 153235457 153235474 2.0E-06 AATTTACTGATTTACTCA 18 V_KROX_Q6_M00982 TRANSFAC - 153233961 153233974 2.0E-06 GCCGCCCCCGCCGC 14 V_TBX5_02_M01020 TRANSFAC - 153228160 153228169 8.0E-06 TAGGGTGTTA 10 V_EGR1_Q6_M01873 TRANSFAC + 153233964 153233973 4.0E-06 GCGGGGGCGG 10 V_HNF1_Q6_01_M01011 TRANSFAC - 153235455 153235475 8.0E-06 TTGAGTAAATCAGTAAATTGG 21 V_NKX52_01_M01315 TRANSFAC - 153235351 153235367 3.0E-06 CTCTGCAATTAATACAT 17 V_OCT1_04_M00138 TRANSFAC + 153235444 153235466 1.0E-05 CTAGTTAAATGCCAATTTACTGA 23 V_HMX1_02_M01481 TRANSFAC - 153235351 153235367 2.0E-06 CTCTGCAATTAATACAT 17 V_GR_Q6_M00192 TRANSFAC + 153228143 153228161 5.0E-06 AAGCCCCAATGTGTCCTTA 19 V_MEF2_04_M00233 TRANSFAC - 153233195 153233216 3.0E-06 CATTATGCTTTAAACAGCCCAG 22 V_STAT4_Q5_M02117 TRANSFAC + 153233431 153233440 6.0E-06 TTATCAGAAA 10 V_HOXB8_01_M01451 TRANSFAC - 153235352 153235367 1.0E-06 CTCTGCAATTAATACA 16 V_GATA1_04_M00128 TRANSFAC - 153233427 153233439 9.0E-06 TTCTGATAAGACA 13 V_HEN1_02_M00058 TRANSFAC - 153233333 153233354 6.0E-06 TACGGAGGCAGCTGCATCCATA 22 V_PLAG1_01_M01778 TRANSFAC + 153233658 153233673 7.0E-06 GAGGCTGCGGAGGGGG 16 V_GFI1B_01_M01058 TRANSFAC - 153235459 153235470 7.0E-06 TAAATCAGTAAA 12 V_CPHX_01_M01478 TRANSFAC - 153235462 153235475 1.0E-05 TTGAGTAAATCAGT 14 V_NFKAPPAB_01_M00054 TRANSFAC + 153235402 153235411 3.0E-06 GGGACTTTCC 10 V_PIT1_Q6_M00802 TRANSFAC - 153233203 153233220 8.0E-06 CCTTCATTATGCTTTAAA 18 V_GATA5_03_M02756 TRANSFAC - 153233425 153233441 1.0E-06 TTTTCTGATAAGACATC 17 V_HMX3_02_M01413 TRANSFAC - 153235351 153235367 3.0E-06 CTCTGCAATTAATACAT 17 V_AR_Q2_M00447 TRANSFAC + 153233682 153233696 9.0E-06 GGAGCGTCAAGTACT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.