Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FAM177B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 400823 family with sequence similarity 177, member B chr1 + 222905557 - 222911057 222910557 Transcription Factor Binding Sites   Download all TFBS in the FAM177B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints LBX2_homeodomain_DBD_dimeric_13_1 SELEX - 222906338 222906350 5.0E-06 CTGAAACTTATTA 13 CTCF_MA0139.1 JASPAR + 222912200 222912218 9.0E-06 TGCCCATTAGGTGGCAGAA 19 FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 222912106 222912119 1.0E-06 GTAAATAAGTTGAT 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 222912106 222912119 1.0E-06 ATCAACTTATTTAC 14 TBX1_TBX_DBD_dimeric_20_2 SELEX + 222912136 222912155 1.0E-05 TTGAGACCCCTCTGTGTGAC 20 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 222910047 222910060 2.0E-06 TGGTTGAAAGGTCA 14 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 222910047 222910065 6.0E-06 TGAGGTGGTTGAAAGGTCA 19 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 222910047 222910057 1.0E-06 TTGAAAGGTCA 11 SRY_HMG_DBD_dimeric_13_2 SELEX + 222912215 222912227 4.0E-06 AGAAAAACATTCA 13 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 222910475 222910492 6.0E-06 CCCATTAACCTTAACTAA 18 TEF_bZIP_DBD_dimeric_12_1 SELEX + 222910456 222910467 7.0E-06 TGTTATATAACT 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 222910456 222910467 6.0E-06 AGTTATATAACA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 222905913 222905925 2.0E-06 AGAAAACAAACAC 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 222910508 222910520 5.0E-06 GTTAAACAAATAC 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 222912178 222912186 8.0E-06 TATGCAAAA 9 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 222910047 222910060 5.0E-06 TGGTTGAAAGGTCA 14 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 222912103 222912113 7.0E-06 TTTGTAAATAA 11 POU2F3_POU_DBD_monomeric_9_1 SELEX - 222912178 222912186 8.0E-06 TATGCAAAA 9 HLF_bZIP_full_dimeric_12_1 SELEX + 222910456 222910467 5.0E-06 TGTTATATAACT 12 HLF_bZIP_full_dimeric_12_1 SELEX - 222910456 222910467 4.0E-06 AGTTATATAACA 12 GLI2_C2H2_DBD_monomeric_14_1 SELEX - 222910862 222910875 8.0E-06 GACCACACAGGTCC 14 DBP_bZIP_full_dimeric_12_1 SELEX + 222910456 222910467 7.0E-06 TGTTATATAACT 12 DBP_bZIP_full_dimeric_12_1 SELEX - 222910456 222910467 4.0E-06 AGTTATATAACA 12 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 222912178 222912186 7.0E-06 TATGCAAAA 9 Pax4_MA0068.1 JASPAR - 222905895 222905924 3.0E-06 GAAAACAAACACTAAATCTTTTCCACTTCA 30 RUNX3_RUNX_full_monomeric_10_1 SELEX + 222906099 222906108 1.0E-05 AAACCACAGA 10 IRF1_MA0050.1 JASPAR + 222905990 222906001 4.0E-06 AGAAGTGAAACC 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 222905995 222906006 8.0E-06 TCACAGGTTTCA 12 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX - 222910047 222910064 2.0E-06 GAGGTGGTTGAAAGGTCA 18 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 222905914 222905924 1.0E-06 GAAAACAAACA 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 222910509 222910519 7.0E-06 TTAAACAAATA 11 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 222910047 222910063 3.0E-06 AGGTGGTTGAAAGGTCA 17 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 222912184 222912197 8.0E-06 ATAGCATATTCTAA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 222912184 222912197 9.0E-06 TTAGAATATGCTAT 14 FOXI1_MA0042.1 JASPAR + 222905911 222905922 3.0E-06 TAGTGTTTGTTT 12 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 222910046 222910060 3.0E-06 TGGTTGAAAGGTCAA 15 Gfi_MA0038.1 JASPAR - 222909845 222909854 1.0E-06 CAAATCACTG 10 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 222910047 222910063 3.0E-06 AGGTGGTTGAAAGGTCA 17 SOX14_HMG_DBD_dimeric_15_1 SELEX + 222912214 222912228 6.0E-06 CAGAAAAACATTCAG 15 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 222910047 222910060 2.0E-06 TGGTTGAAAGGTCA 14 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 222905914 222905924 1.0E-06 GAAAACAAACA 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 222910509 222910519 2.0E-06 TTAAACAAATA 11 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 222910046 222910060 3.0E-06 TGGTTGAAAGGTCAA 15 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 222910046 222910061 5.0E-06 GTGGTTGAAAGGTCAA 16 Foxd3_MA0041.1 JASPAR - 222912215 222912226 8.0E-06 GAATGTTTTTCT 12 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 222910047 222910060 7.0E-06 TGGTTGAAAGGTCA 14 FOXO3_forkhead_full_dimeric_14_1 SELEX + 222912106 222912119 3.0E-06 GTAAATAAGTTGAT 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 222912106 222912119 2.0E-06 ATCAACTTATTTAC 14 RUNX1_MA0002.2 JASPAR - 222906099 222906109 0.0E+00 TTCTGTGGTTT 11 FOXB1_forkhead_full_monomeric_9_1 SELEX + 222912105 222912113 4.0E-06 TGTAAATAA 9 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 222910047 222910061 5.0E-06 GTGGTTGAAAGGTCA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 222905914 222905926 1.0E-06 GAGAAAACAAACA 13 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 222910047 222910060 2.0E-06 TGGTTGAAAGGTCA 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 222912106 222912119 5.0E-06 GTAAATAAGTTGAT 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 222912106 222912119 2.0E-06 ATCAACTTATTTAC 14 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 222912103 222912113 3.0E-06 TTTGTAAATAA 11 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 222912106 222912119 3.0E-06 GTAAATAAGTTGAT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 222912106 222912119 1.0E-06 ATCAACTTATTTAC 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 222905911 222905924 6.0E-06 GAAAACAAACACTA 14 V_NFAT_Q4_01_M00935 TRANSFAC - 222910444 222910453 7.0E-06 TTGGAAAAAT 10 V_FOXP1_01_M00987 TRANSFAC + 222906378 222906397 7.0E-06 TCAGGTATGTTTTTCTTTTT 20 V_CEBPG_Q6_M00622 TRANSFAC + 222906118 222906130 4.0E-06 CTTATTTCTCAAA 13 V_HNF3B_01_M00131 TRANSFAC + 222905909 222905923 1.0E-06 TTTAGTGTTTGTTTT 15 V_HNF3B_01_M00131 TRANSFAC - 222910510 222910524 3.0E-06 CTCAGTATTTGTTTA 15 V_FREAC7_01_M00293 TRANSFAC + 222906083 222906098 9.0E-06 TAGCAGTAAATAAGAT 16 V_TCF3_01_M01594 TRANSFAC - 222906264 222906276 8.0E-06 TCTTTCAAATGTT 13 V_AML_Q6_M00769 TRANSFAC - 222906097 222906111 1.0E-06 AATTCTGTGGTTTAT 15 V_AML_Q6_M00769 TRANSFAC + 222906366 222906380 6.0E-06 AATCATGTGGTTTCA 15 V_POU3F3_01_M03090 TRANSFAC - 222912174 222912190 1.0E-05 ATGCTATGCAAAATTCA 17 V_EVI1_05_M00082 TRANSFAC + 222906090 222906100 1.0E-06 AAATAAGATAA 11 V_XFD1_01_M00267 TRANSFAC + 222912103 222912116 3.0E-06 TTTGTAAATAAGTT 14 V_FOXA2_04_M02749 TRANSFAC - 222905932 222905948 2.0E-06 TTTAAGTACATAAACTA 17 V_FOXA2_04_M02749 TRANSFAC + 222912101 222912117 3.0E-06 TTTTTGTAAATAAGTTG 17 V_EVI1_04_M00081 TRANSFAC - 222910442 222910456 9.0E-06 AGATTGGAAAAATAA 15 V_FOXD3_01_M00130 TRANSFAC - 222912215 222912226 9.0E-06 GAATGTTTTTCT 12 V_NKX29_01_M01352 TRANSFAC - 222905933 222905949 2.0E-06 GTTTAAGTACATAAACT 17 V_NKX29_01_M01352 TRANSFAC + 222905934 222905950 2.0E-06 GTTTATGTACTTAAACT 17 V_IK_Q5_M01169 TRANSFAC - 222912299 222912308 3.0E-06 TTTGGGAGGT 10 V_CBF_02_M01080 TRANSFAC + 222905945 222905960 1.0E-06 TAAACTGTGGTTTTTT 16 V_MAFB_03_M02879 TRANSFAC - 222910442 222910456 7.0E-06 AGATTGGAAAAATAA 15 V_NR2F2_03_M02783 TRANSFAC - 222910043 222910058 4.0E-06 GTTGAAAGGTCAAACC 16 V_OCTAMER_01_M01324 TRANSFAC - 222912174 222912190 1.0E-05 ATGCTATGCAAAATTCA 17 V_IRF_Q6_01_M00972 TRANSFAC + 222905990 222906000 3.0E-06 AGAAGTGAAAC 11 V_IRF_Q6_01_M00972 TRANSFAC - 222906109 222906119 9.0E-06 AGAACTGAAAT 11 V_SRY_02_M00160 TRANSFAC - 222910502 222910513 8.0E-06 TTTAACAAATGA 12 V_OCT1_01_M00135 TRANSFAC - 222912173 222912191 9.0E-06 TATGCTATGCAAAATTCAT 19 V_FOXO3A_Q1_M01137 TRANSFAC + 222906087 222906098 4.0E-06 AGTAAATAAGAT 12 V_FOXO3A_Q1_M01137 TRANSFAC + 222912105 222912116 0.0E+00 TGTAAATAAGTT 12 V_CEBP_Q2_M00190 TRANSFAC - 222910443 222910456 7.0E-06 AGATTGGAAAAATA 14 V_YY1_Q6_M00793 TRANSFAC - 222910936 222910944 7.0E-06 GCCATCTTG 9 V_HNF3_Q6_01_M01012 TRANSFAC + 222905909 222905926 0.0E+00 TTTAGTGTTTGTTTTCTC 18 V_HNF3_Q6_01_M01012 TRANSFAC - 222910507 222910524 4.0E-06 CTCAGTATTTGTTTAACA 18 V_HFH4_01_M00742 TRANSFAC + 222905911 222905923 0.0E+00 TAGTGTTTGTTTT 13 V_HFH4_01_M00742 TRANSFAC + 222910500 222910512 4.0E-06 ATTCATTTGTTAA 13 V_HFH4_01_M00742 TRANSFAC - 222910510 222910522 0.0E+00 CAGTATTTGTTTA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC + 222910047 222910059 9.0E-06 TGACCTTTCAACC 13 V_PU1_Q4_M01172 TRANSFAC - 222905984 222906002 0.0E+00 AGGTTTCACTTCTTCTTCT 19 V_LYF1_01_M00141 TRANSFAC - 222912300 222912308 9.0E-06 TTTGGGAGG 9 V_ZFP691_03_M02833 TRANSFAC + 222912245 222912261 9.0E-06 TAGCTAGTGCTCACTCT 17 V_PPARGRXRA_01_M02262 TRANSFAC - 222910047 222910061 6.0E-06 GTGGTTGAAAGGTCA 15 V_GLI3_02_M01704 TRANSFAC - 222910865 222910875 7.0E-06 GACCACACAGG 11 V_SOX7_03_M02807 TRANSFAC - 222910496 222910517 4.0E-06 TTTGTTTAACAAATGAATCATA 22 V_FOXA2_02_M02853 TRANSFAC - 222909848 222909862 1.0E-06 TGAAATAACAAATCA 15 V_HNF3G_Q4_M02015 TRANSFAC + 222905914 222905921 7.0E-06 TGTTTGTT 8 V_E4BP4_01_M00045 TRANSFAC - 222910456 222910467 7.0E-06 AGTTATATAACA 12 V_RUNX1_01_M02257 TRANSFAC - 222906099 222906109 0.0E+00 TTCTGTGGTTT 11 V_GFI1_01_M00250 TRANSFAC - 222909837 222909860 0.0E+00 AAATAACAAATCACTGCCGCTCCT 24 V_TEF_Q6_M00672 TRANSFAC - 222910442 222910453 9.0E-06 TTGGAAAAATAA 12 V_NFAT_Q6_M00302 TRANSFAC - 222910444 222910455 8.0E-06 GATTGGAAAAAT 12 V_XFD3_01_M00269 TRANSFAC - 222905914 222905927 7.0E-06 TGAGAAAACAAACA 14 V_HNF3_Q6_M00791 TRANSFAC - 222905912 222905924 8.0E-06 GAAAACAAACACT 13 V_HNF3_Q6_M00791 TRANSFAC + 222910509 222910521 1.0E-06 TTAAACAAATACT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 222905914 222905924 7.0E-06 TGTTTGTTTTC 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 222910509 222910519 1.0E-06 TATTTGTTTAA 11 V_ISRE_01_M00258 TRANSFAC - 222905988 222906002 2.0E-06 AGGTTTCACTTCTTC 15 V_OCT1_04_M00138 TRANSFAC - 222912171 222912193 5.0E-06 AATATGCTATGCAAAATTCATCT 23 V_PEBP_Q6_M00984 TRANSFAC + 222906097 222906111 1.0E-06 ATAAACCACAGAATT 15 V_NKX3A_01_M00451 TRANSFAC - 222905938 222905949 4.0E-06 GTTTAAGTACAT 12 V_OCT4_02_M01124 TRANSFAC + 222910500 222910514 5.0E-06 ATTCATTTGTTAAAC 15 V_NR1B1_Q6_M02110 TRANSFAC - 222910045 222910054 0.0E+00 AAAGGTCAAA 10 V_OCT1_B_M00342 TRANSFAC - 222912177 222912186 7.0E-06 TATGCAAAAT 10 V_OCT_Q6_M00795 TRANSFAC + 222912176 222912186 8.0E-06 AATTTTGCATA 11 V_NKX23_01_M01457 TRANSFAC + 222905934 222905949 1.0E-05 GTTTATGTACTTAAAC 16 V_NKX23_01_M01457 TRANSFAC - 222905934 222905949 1.0E-05 GTTTAAGTACATAAAC 16 V_FOXO1_Q5_M01216 TRANSFAC - 222905916 222905924 5.0E-06 GAAAACAAA 9 V_GATA4_Q3_M00632 TRANSFAC + 222910065 222910076 2.0E-06 AGAAAAAAGGAA 12 V_ZFP105_04_M02931 TRANSFAC + 222912102 222912118 4.0E-06 TTTTGTAAATAAGTTGA 17 V_YY1_03_M02044 TRANSFAC - 222910936 222910947 2.0E-06 GACGCCATCTTG 12 V_GFI1_Q6_M01067 TRANSFAC - 222909843 222909855 2.0E-06 ACAAATCACTGCC 13 V_SOX15_03_M02799 TRANSFAC - 222910499 222910515 7.0E-06 TGTTTAACAAATGAATC 17 V_MTF1_06_M02882 TRANSFAC + 222906090 222906103 2.0E-06 AAATAAGATAAACC 14 V_MTF1_06_M02882 TRANSFAC - 222909847 222909860 6.0E-06 AAATAACAAATCAC 14 V_MTF1_06_M02882 TRANSFAC - 222909854 222909867 6.0E-06 AAATGTGAAATAAC 14 V_MTF1_06_M02882 TRANSFAC - 222910443 222910456 8.0E-06 AGATTGGAAAAATA 14 V_POU5F1_01_M01307 TRANSFAC - 222912177 222912186 4.0E-06 TATGCAAAAT 10 V_CEBPA_01_M00116 TRANSFAC - 222910443 222910456 7.0E-06 AGATTGGAAAAATA 14 V_FOXL1_02_M02857 TRANSFAC - 222906316 222906331 7.0E-06 AGAGTTTAACAAAAAG 16 V_FOXL1_04_M02753 TRANSFAC + 222912101 222912117 3.0E-06 TTTTTGTAAATAAGTTG 17 V_NKX3A_02_M01383 TRANSFAC - 222905933 222905949 6.0E-06 GTTTAAGTACATAAACT 17 V_NKX3A_02_M01383 TRANSFAC + 222905934 222905950 6.0E-06 GTTTATGTACTTAAACT 17 V_CBF_01_M01079 TRANSFAC + 222905945 222905960 1.0E-06 TAAACTGTGGTTTTTT 16 V_DELTAEF1_01_M00073 TRANSFAC - 222909933 222909943 4.0E-06 CTTCACCTGAA 11 V_GFI1B_01_M01058 TRANSFAC - 222909843 222909854 2.0E-06 CAAATCACTGCC 12 V_SMAD3_03_M02794 TRANSFAC + 222906007 222906023 0.0E+00 AAGAACCAGACATCAAA 17 V_FOXO3_01_M00477 TRANSFAC + 222905914 222905927 9.0E-06 TGTTTGTTTTCTCA 14 V_FOX_Q2_M00809 TRANSFAC + 222905911 222905923 1.0E-06 TAGTGTTTGTTTT 13 V_FOX_Q2_M00809 TRANSFAC + 222905934 222905946 7.0E-06 GTTTATGTACTTA 13 V_FOX_Q2_M00809 TRANSFAC - 222910510 222910522 3.0E-06 CAGTATTTGTTTA 13 V_PLZF_02_M01075 TRANSFAC + 222905913 222905941 4.0E-06 GTGTTTGTTTTCTCAATCTTAGTTTATGT 29 V_HSF_Q6_M00641 TRANSFAC - 222906142 222906154 6.0E-06 TTCTACAAGCTTC 13 V_IRF1_Q6_01_M01881 TRANSFAC - 222905989 222906002 7.0E-06 AGGTTTCACTTCTT 14 V_RARA_03_M02787 TRANSFAC - 222910043 222910058 9.0E-06 GTTGAAAGGTCAAACC 16 V_NUR77_Q5_M01217 TRANSFAC + 222910046 222910055 1.0E-06 TTGACCTTTC 10 V_HFH3_01_M00289 TRANSFAC + 222905911 222905923 3.0E-06 TAGTGTTTGTTTT 13 V_HSF2_02_M01244 TRANSFAC + 222906142 222906154 5.0E-06 GAAGCTTGTAGAA 13 V_FOXJ2_01_M00422 TRANSFAC - 222905909 222905926 1.0E-06 GAGAAAACAAACACTAAA 18 V_FOXJ2_01_M00422 TRANSFAC + 222910507 222910524 6.0E-06 TGTTAAACAAATACTGAG 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 222905950 222905957 1.0E-05 TGTGGTTT 8 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 222906099 222906106 1.0E-05 TGTGGTTT 8 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 222906371 222906378 1.0E-05 TGTGGTTT 8 V_HNF3B_Q6_M02014 TRANSFAC - 222906087 222906095 6.0E-06 TTATTTACT 9 V_RXRLXRB_01_M01198 TRANSFAC - 222910047 222910059 3.0E-06 GGTTGAAAGGTCA 13 V_IRXB3_01_M01377 TRANSFAC + 222910486 222910502 6.0E-06 TAACTAAATGTATGATT 17 V_PBX1_04_M01357 TRANSFAC + 222906012 222906028 8.0E-06 CCAGACATCAAACCTCA 17 V_STAT1_05_M01260 TRANSFAC - 222906126 222906147 1.0E-05 AGCTTCAGAGAAATCATTTTGA 22 V_AR_Q6_M00962 TRANSFAC - 222912261 222912269 6.0E-06 TGAGCACAA 9 V_EVI1_03_M00080 TRANSFAC + 222906090 222906100 4.0E-06 AAATAAGATAA 11 V_PAX4_04_M00380 TRANSFAC - 222906369 222906398 2.0E-06 AAAAAAGAAAAACATACCTGAAACCACATG 30 V_PAX4_04_M00380 TRANSFAC - 222906379 222906408 1.0E-05 AAAGAAAAAGAAAAAAGAAAAACATACCTG 30 PPARG_RXRA_MA0065.2 JASPAR - 222910047 222910061 6.0E-06 GTGGTTGAAAGGTCA 15 V_PPARA_01_M00242 TRANSFAC - 222910047 222910066 8.0E-06 CTGAGGTGGTTGAAAGGTCA 20 V_TR4_03_M01782 TRANSFAC - 222910047 222910059 3.0E-06 GGTTGAAAGGTCA 13 V_NANOG_02_M01247 TRANSFAC - 222905914 222905933 6.0E-06 TAAGATTGAGAAAACAAACA 20 V_NANOG_02_M01247 TRANSFAC - 222910498 222910517 8.0E-06 TTTGTTTAACAAATGAATCA 20 V_T3RALPHA_Q6_M01724 TRANSFAC + 222906345 222906355 3.0E-06 TTTCAGGTCAG 11 V_PPARG_01_M00512 TRANSFAC - 222910043 222910063 2.0E-06 AGGTGGTTGAAAGGTCAAACC 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.