Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

HEATR4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 399671 HEAT repeat containing 4 chr14 - 74025151 - 74030651 74025651 Transcription Factor Binding Sites   Download all TFBS in the HEATR4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 74026452 74026464 3.0E-06 ATAAAAATAAAAA 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 74026454 74026466 7.0E-06 AAAAATAAAAAAA 13 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 74025073 74025089 9.0E-06 TCAAAAAAAAAAAAACA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 74026451 74026462 7.0E-06 GATAAAAATAAA 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 74025071 74025082 5.0E-06 AAAAAAAACAAA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 74026453 74026465 3.0E-06 TAAAAATAAAAAA 13 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 74026663 74026674 7.0E-06 CCTTTGCCCACA 12 Tp53_p53l_DBD_dimeric_18_2 SELEX + 74023274 74023291 6.0E-06 GGCTTGTTCTGGCTTGTC 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 74023274 74023291 5.0E-06 GACAAGCCAGAACAAGCC 18 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 74023247 74023263 1.0E-06 AATGTTACACAAGGTCT 17 Tp73_p53l_DBD_dimeric_18_1 SELEX - 74023274 74023291 8.0E-06 GACAAGCCAGAACAAGCC 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 74026451 74026462 2.0E-06 GATAAAAATAAA 12 Pax4_MA0068.1 JASPAR - 74025057 74025086 5.0E-06 AAAAAAAAAAAACAAATCAAGGCATTAGAC 30 Pax4_MA0068.1 JASPAR + 74026454 74026483 9.0E-06 AAAAATAAAAAAACCCTCTAGATATATGCA 30 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 74026714 74026729 6.0E-06 TAATGGCTAATAATCT 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 74026714 74026729 6.0E-06 TAATGGCTAATAATCT 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 74026454 74026464 8.0E-06 AAAAATAAAAA 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 74025073 74025086 4.0E-06 AAAAAAAAAAAACA 14 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 74026665 74026676 9.0E-06 TTTGCCCACACA 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 74026454 74026464 4.0E-06 AAAAATAAAAA 11 Gata1_MA0035.2 JASPAR + 74026448 74026458 5.0E-06 AAAGATAAAAA 11 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 74026716 74026730 1.0E-06 ATTATTAGCCATTAA 15 Foxd3_MA0041.1 JASPAR + 74025070 74025081 1.0E-06 ATTTGTTTTTTT 12 LHX9_homeodomain_DBD_dimeric_13_1 SELEX - 74026717 74026729 2.0E-06 TAATGGCTAATAA 13 ID4_bHLH_DBD_dimeric_10_1 SELEX - 74023314 74023323 1.0E-06 TACACCTGTC 10 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 74026665 74026675 4.0E-06 TTTGCCCACAC 11 CPEB1_RRM_full_monomeric_8_1 SELEX + 74026457 74026464 4.0E-06 AATAAAAA 8 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 74026717 74026730 4.0E-06 TTATTAGCCATTAA 14 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 74026717 74026730 3.0E-06 TTAATGGCTAATAA 14 TP53_MA0106.1 JASPAR + 74023271 74023290 7.0E-06 AGAGGCTTGTTCTGGCTTGT 20 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 74026665 74026676 9.0E-06 TTTGCCCACACA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 74025069 74025081 4.0E-06 AAAAAAACAAATC 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 74025073 74025085 4.0E-06 AAAAAAAAAAACA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 74026452 74026464 0.0E+00 ATAAAAATAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 74025073 74025085 1.0E-06 AAAAAAAAAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 74025075 74025087 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 74026452 74026464 2.0E-06 ATAAAAATAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 74026454 74026466 2.0E-06 AAAAATAAAAAAA 13 TP63_p53l_DBD_dimeric_18_1 SELEX - 74023274 74023291 4.0E-06 GACAAGCCAGAACAAGCC 18 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 74025073 74025086 5.0E-06 AAAAAAAAAAAACA 14 V_FOXP1_01_M00987 TRANSFAC + 74025067 74025086 5.0E-06 TTGATTTGTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 74025068 74025087 0.0E+00 TGATTTGTTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 74026448 74026467 4.0E-06 GTTTTTTTATTTTTATCTTT 20 V_HNF3B_01_M00131 TRANSFAC + 74025068 74025082 2.0E-06 TGATTTGTTTTTTTT 15 V_MYOD_Q6_M00184 TRANSFAC - 74023314 74023323 9.0E-06 TACACCTGTC 10 V_AR_02_M00953 TRANSFAC - 74023234 74023260 1.0E-06 CCTTGTGTAACATTTTGTTCTGTCCCC 27 V_OBOX5_05_M03066 TRANSFAC - 74026651 74026667 8.0E-06 AAAGGAGATTAAGTAGC 17 V_TCFE2A_04_M02927 TRANSFAC + 74026587 74026603 7.0E-06 TAAAACAGATGGTAAAG 17 V_GATA2_02_M00348 TRANSFAC + 74026448 74026457 8.0E-06 AAAGATAAAA 10 TAL1_TCF3_MA0091.1 JASPAR + 74026588 74026599 8.0E-06 AAAACAGATGGT 12 TAL1_TCF3_MA0091.1 JASPAR - 74026590 74026601 3.0E-06 TTACCATCTGTT 12 V_FOXA2_04_M02749 TRANSFAC + 74020714 74020730 8.0E-06 AATCTGTACACAAAAGA 17 V_OBOX1_01_M01450 TRANSFAC - 74026652 74026668 7.0E-06 CAAAGGAGATTAAGTAG 17 V_HMGIY_Q3_M01010 TRANSFAC + 74025070 74025084 5.0E-06 ATTTGTTTTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC + 74026450 74026464 1.0E-06 AGATAAAAATAAAAA 15 V_FOXD3_01_M00130 TRANSFAC + 74025070 74025081 1.0E-06 ATTTGTTTTTTT 12 V_BCL6_01_M01183 TRANSFAC + 74025068 74025083 7.0E-06 TGATTTGTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 74025071 74025086 1.0E-06 TTTGTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 74026448 74026463 1.0E-06 TTTTATTTTTATCTTT 16 V_GATA3_03_M00351 TRANSFAC + 74026448 74026457 4.0E-06 AAAGATAAAA 10 V_HOXA13_02_M01297 TRANSFAC + 74026456 74026464 4.0E-06 AAATAAAAA 9 V_AR_Q6_01_M01996 TRANSFAC - 74023239 74023253 1.0E-06 TAACATTTTGTTCTG 15 V_MEF2_02_M00231 TRANSFAC + 74026445 74026466 1.0E-06 TCAAAAGATAAAAATAAAAAAA 22 V_FOXO3A_Q1_M01137 TRANSFAC + 74026453 74026464 2.0E-06 TAAAAATAAAAA 12 V_HNF3_Q6_01_M01012 TRANSFAC + 74025068 74025085 4.0E-06 TGATTTGTTTTTTTTTTT 18 V_HFH4_01_M00742 TRANSFAC + 74025066 74025078 8.0E-06 CTTGATTTGTTTT 13 V_TCFAP2E_04_M02926 TRANSFAC - 74025074 74025087 7.0E-06 AAAAAAAAAAAAAC 14 V_TCFAP2E_04_M02926 TRANSFAC - 74025075 74025088 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 74025076 74025089 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 74025077 74025090 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 74025079 74025092 2.0E-06 GTCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 74026453 74026466 8.0E-06 TAAAAATAAAAAAA 14 V_CDX_Q5_M00991 TRANSFAC - 74025067 74025084 9.0E-06 AAAAAAAAAACAAATCAA 18 V_MEF2A_Q6_M02024 TRANSFAC - 74026451 74026460 4.0E-06 TATTTTTATC 10 V_AR_03_M00956 TRANSFAC - 74023234 74023260 6.0E-06 CCTTGTGTAACATTTTGTTCTGTCCCC 27 V_REX1_01_M01695 TRANSFAC + 74026720 74026729 4.0E-06 TTAGCCATTA 10 V_ELF4_04_M02850 TRANSFAC - 74025073 74025089 7.0E-06 TCAAAAAAAAAAAAACA 17 V_ELF4_04_M02850 TRANSFAC - 74025074 74025090 1.0E-06 CTCAAAAAAAAAAAAAC 17 V_ELF4_04_M02850 TRANSFAC - 74025075 74025091 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 74025076 74025092 1.0E-06 GTCTCAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 74026451 74026467 1.0E-06 GATAAAAATAAAAAAAC 17 V_OBOX5_02_M01480 TRANSFAC - 74026651 74026667 8.0E-06 AAAGGAGATTAAGTAGC 17 V_FOXA2_02_M02853 TRANSFAC - 74025068 74025082 2.0E-06 AAAAAAAACAAATCA 15 V_FOXA2_02_M02853 TRANSFAC + 74026454 74026468 2.0E-06 AAAAATAAAAAAACC 15 V_ZFP105_03_M02827 TRANSFAC - 74025069 74025083 4.0E-06 AAAAAAAAACAAATC 15 V_ZFP105_03_M02827 TRANSFAC - 74025072 74025086 1.0E-06 AAAAAAAAAAAACAA 15 V_ZFP105_03_M02827 TRANSFAC - 74025073 74025087 1.0E-06 AAAAAAAAAAAAACA 15 V_ZFP105_03_M02827 TRANSFAC - 74025074 74025088 7.0E-06 CAAAAAAAAAAAAAC 15 V_ZFP105_03_M02827 TRANSFAC - 74025075 74025089 2.0E-06 TCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 74025076 74025090 1.0E-06 CTCAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 74026453 74026467 2.0E-06 TAAAAATAAAAAAAC 15 V_GFI1_01_M00250 TRANSFAC - 74025057 74025080 0.0E+00 AAAAAACAAATCAAGGCATTAGAC 24 V_HNF1_Q6_M00790 TRANSFAC - 74026448 74026465 9.0E-06 TTTTTTATTTTTATCTTT 18 V_P53_03_M01651 TRANSFAC + 74023273 74023292 0.0E+00 AGGCTTGTTCTGGCTTGTCT 20 V_P53_03_M01651 TRANSFAC - 74023273 74023292 0.0E+00 AGACAAGCCAGAACAAGCCT 20 V_RSRFC4_Q2_M00407 TRANSFAC + 74026449 74026465 6.0E-06 AAGATAAAAATAAAAAA 17 V_HNF3_Q6_M00791 TRANSFAC - 74025071 74025083 4.0E-06 AAAAAAAAACAAA 13 V_HNF3_Q6_M00791 TRANSFAC + 74026454 74026466 6.0E-06 AAAAATAAAAAAA 13 V_HNF1_Q6_01_M01011 TRANSFAC + 74026447 74026467 1.0E-06 AAAAGATAAAAATAAAAAAAC 21 V_OCT1_04_M00138 TRANSFAC - 74026445 74026467 3.0E-06 GTTTTTTTATTTTTATCTTTTGA 23 V_TAL1BETAE47_01_M00065 TRANSFAC + 74026587 74026602 1.0E-06 TAAAACAGATGGTAAA 16 V_SOX12_04_M02900 TRANSFAC + 74020717 74020732 8.0E-06 CTGTACACAAAAGAAT 16 V_SOX12_04_M02900 TRANSFAC - 74023287 74023302 3.0E-06 AGACAGACAAAGACAA 16 V_GATA1_09_M02254 TRANSFAC + 74026448 74026458 5.0E-06 AAAGATAAAAA 11 V_TCF7_03_M02817 TRANSFAC + 74026447 74026463 8.0E-06 AAAAGATAAAAATAAAA 17 V_MEF2_Q6_01_M00941 TRANSFAC - 74026452 74026463 8.0E-06 TTTTATTTTTAT 12 V_TBP_06_M02814 TRANSFAC - 74026449 74026464 9.0E-06 TTTTTATTTTTATCTT 16 V_FOXO1_Q5_M01216 TRANSFAC - 74025071 74025079 1.0E-06 AAAAACAAA 9 V_TAL1BETAITF2_01_M00070 TRANSFAC + 74026587 74026602 2.0E-06 TAAAACAGATGGTAAA 16 V_GR_Q6_02_M01836 TRANSFAC - 74023238 74023250 0.0E+00 CATTTTGTTCTGT 13 V_GATA1_05_M00346 TRANSFAC + 74026582 74026591 6.0E-06 GCTGATAAAA 10 V_MTF1_06_M02882 TRANSFAC - 74025071 74025084 5.0E-06 AAAAAAAAAACAAA 14 V_MTF1_06_M02882 TRANSFAC - 74025073 74025086 4.0E-06 AAAAAAAAAAAACA 14 V_MTF1_06_M02882 TRANSFAC - 74025074 74025087 1.0E-06 AAAAAAAAAAAAAC 14 V_MTF1_06_M02882 TRANSFAC - 74025075 74025088 8.0E-06 CAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 74026450 74026463 2.0E-06 AGATAAAAATAAAA 14 V_MTF1_06_M02882 TRANSFAC + 74026453 74026466 4.0E-06 TAAAAATAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 74026454 74026467 2.0E-06 AAAAATAAAAAAAC 14 V_MTF1_06_M02882 TRANSFAC + 74026456 74026469 5.0E-06 AAATAAAAAAACCC 14 V_FAC1_01_M00456 TRANSFAC - 74025071 74025084 1.0E-06 AAAAAAAAAACAAA 14 V_FAC1_01_M00456 TRANSFAC - 74025073 74025086 6.0E-06 AAAAAAAAAAAACA 14 V_MYOD_Q6_01_M00929 TRANSFAC + 74026586 74026603 8.0E-06 ATAAAACAGATGGTAAAG 18 V_GATA1_04_M00128 TRANSFAC + 74026447 74026459 6.0E-06 AAAAGATAAAAAT 13 V_AREB6_02_M00413 TRANSFAC - 74023313 74023324 3.0E-06 TTACACCTGTCC 12 V_FOXL1_02_M02857 TRANSFAC - 74025068 74025083 5.0E-06 AAAAAAAAACAAATCA 16 V_FOXL1_02_M02857 TRANSFAC + 74026450 74026465 2.0E-06 AGATAAAAATAAAAAA 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 74026587 74026602 1.0E-06 TAAAACAGATGGTAAA 16 V_FOXL1_04_M02753 TRANSFAC - 74025068 74025084 5.0E-06 AAAAAAAAAACAAATCA 17 V_FOXJ3_06_M02855 TRANSFAC - 74025068 74025084 1.0E-05 AAAAAAAAAACAAATCA 17 V_GATA3_02_M00350 TRANSFAC + 74026448 74026457 3.0E-06 AAAGATAAAA 10 V_GFI1B_01_M01058 TRANSFAC - 74025063 74025074 6.0E-06 CAAATCAAGGCA 12 V_GATA6_01_M00462 TRANSFAC + 74026448 74026457 3.0E-06 AAAGATAAAA 10 V_DMRT7_01_M01151 TRANSFAC + 74025072 74025085 1.0E-05 TTGTTTTTTTTTTT 14 V_P53_05_M01655 TRANSFAC + 74023273 74023292 0.0E+00 AGGCTTGTTCTGGCTTGTCT 20 V_P53_04_M01652 TRANSFAC + 74023273 74023292 0.0E+00 AGGCTTGTTCTGGCTTGTCT 20 V_P53_04_M01652 TRANSFAC - 74023273 74023292 0.0E+00 AGACAAGCCAGAACAAGCCT 20 V_P63_01_M01656 TRANSFAC + 74023273 74023292 2.0E-06 AGGCTTGTTCTGGCTTGTCT 20 V_P63_01_M01656 TRANSFAC - 74023273 74023292 3.0E-06 AGACAAGCCAGAACAAGCCT 20 V_SRF_06_M02916 TRANSFAC - 74025068 74025084 3.0E-06 AAAAAAAAAACAAATCA 17 V_SRF_06_M02916 TRANSFAC - 74025069 74025085 2.0E-06 AAAAAAAAAAACAAATC 17 V_SRF_06_M02916 TRANSFAC - 74025070 74025086 1.0E-06 AAAAAAAAAAAACAAAT 17 V_SRF_06_M02916 TRANSFAC - 74025071 74025087 0.0E+00 AAAAAAAAAAAAACAAA 17 V_SRF_06_M02916 TRANSFAC - 74025072 74025088 0.0E+00 CAAAAAAAAAAAAACAA 17 V_SRF_06_M02916 TRANSFAC - 74025073 74025089 1.0E-06 TCAAAAAAAAAAAAACA 17 V_SRF_06_M02916 TRANSFAC - 74025074 74025090 0.0E+00 CTCAAAAAAAAAAAAAC 17 V_SRF_06_M02916 TRANSFAC - 74025075 74025091 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 74025076 74025092 2.0E-06 GTCTCAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 74026450 74026466 3.0E-06 AGATAAAAATAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 74026451 74026467 1.0E-06 GATAAAAATAAAAAAAC 17 V_SRF_06_M02916 TRANSFAC + 74026452 74026468 3.0E-06 ATAAAAATAAAAAAACC 17 V_SMAD3_Q6_M00701 TRANSFAC + 74023294 74023302 3.0E-06 TGTCTGTCT 9 V_FOXO1_01_M00473 TRANSFAC - 74025071 74025080 2.0E-06 AAAAAACAAA 10 V_PR_02_M00957 TRANSFAC - 74023234 74023260 6.0E-06 CCTTGTGTAACATTTTGTTCTGTCCCC 27 V_PIT1_Q6_M00802 TRANSFAC - 74020716 74020733 1.0E-05 AATTCTTTTGTGTACAGA 18 V_FOXO4_01_M00472 TRANSFAC - 74025069 74025079 3.0E-06 AAAAACAAATC 11 V_GATA6_04_M02757 TRANSFAC + 74026445 74026461 4.0E-06 TCAAAAGATAAAAATAA 17 V_OBOX5_01_M01381 TRANSFAC - 74026651 74026667 7.0E-06 AAAGGAGATTAAGTAGC 17 V_TCF3_05_M02920 TRANSFAC - 74025077 74025091 4.0E-06 TCTCAAAAAAAAAAA 15 V_OBOX6_06_M03067 TRANSFAC + 74026651 74026667 7.0E-06 GCTACTTAATCTCCTTT 17 V_AR_01_M00481 TRANSFAC - 74023240 74023254 6.0E-06 GTAACATTTTGTTCT 15 V_PAX4_04_M00380 TRANSFAC - 74025054 74025083 7.0E-06 AAAAAAAAACAAATCAAGGCATTAGACCAG 30 V_PAX4_04_M00380 TRANSFAC - 74025056 74025085 1.0E-06 AAAAAAAAAAACAAATCAAGGCATTAGACC 30 V_NANOG_02_M01247 TRANSFAC - 74025064 74025083 8.0E-06 AAAAAAAAACAAATCAAGGC 20 V_NANOG_02_M01247 TRANSFAC - 74025070 74025089 8.0E-06 TCAAAAAAAAAAAAACAAAT 20 V_GATA1_06_M00347 TRANSFAC + 74026448 74026457 1.0E-05 AAAGATAAAA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.