Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

MEX3D


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
399664 mex-3 homolog D (C. elegans) chr19 -1567557 - 1573057 1568057

Transcription Factor Binding Sites

 
Download all TFBS in the MEX3D promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
KLF16_C2H2_DBD_monomeric_11_1 SELEX + 1568373 1568383 1.0E-05 GCCCCGCCCCC 11
HINFP1_C2H2_full_dimeric_20_1 SELEX - 1567411 1567430 3.0E-06 GGGGTCCCCGCACCGTCCGC 20
MAX_bHLH_DBD_dimeric_10_1 SELEX - 1568465 1568474 8.0E-06 ACCACGTGCC 10
EWSR1-FLI1_MA0149.1 JASPAR + 1566587 1566604 8.0E-06 GGCGGGAAGGCAGGAGAA 18
SOX9_HMG_DBD_monomeric_9_1 SELEX + 1566766 1566774 9.0E-06 GAACAATGG 9
TCF4_bHLH_full_dimeric_10_1 SELEX - 1568540 1568549 9.0E-06 CACACCTGCA 10
MNT_bHLH_DBD_dimeric_10_1 SELEX - 1568465 1568474 7.0E-06 ACCACGTGCC 10
SP1_MA0079.2 JASPAR + 1568374 1568383 7.0E-06 CCCCGCCCCC 10
SOX9_MA0077.1 JASPAR + 1566766 1566774 5.0E-06 GAACAATGG 9
Sox2_MA0143.1 JASPAR - 1567297 1567311 4.0E-06 CCTTTGTCCTGCAGC 15
V_E2F4_Q6_M02090 TRANSFAC - 1567283 1567292 1.0E-05 GCGGGAGAAA 10
V_STAT3STAT3_Q3_M01220 TRANSFAC - 1569191 1569204 8.0E-06 TTGCGGGGAAAGGC 14
V_SP1_Q6_01_M00931 TRANSFAC - 1567073 1567082 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC - 1568362 1568371 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC - 1568373 1568382 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 1568436 1568445 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 1568447 1568456 4.0E-06 GGGGCGGGGC 10
V_PLAG1_02_M01973 TRANSFAC + 1566964 1566979 2.0E-06 CCCCAGTCAGGGCCCC 16
V_SP1_03_M02281 TRANSFAC + 1568374 1568383 7.0E-06 CCCCGCCCCC 10
V_CMYC_02_M01154 TRANSFAC + 1568464 1568475 9.0E-06 GGGCACGTGGTC 12
V_CMYC_02_M01154 TRANSFAC - 1568464 1568475 1.0E-06 GACCACGTGCCC 12
V_TGIF2_01_M01407 TRANSFAC - 1566871 1566886 1.0E-05 GACCGGCTGTCAAAGC 16
V_ZNF219_01_M01122 TRANSFAC + 1567105 1567116 5.0E-06 CGCCCCCCGCCC 12
V_GC_01_M00255 TRANSFAC - 1568371 1568384 8.0E-06 CGGGGGCGGGGCCG 14
V_CMYC_01_M01145 TRANSFAC - 1568464 1568475 2.0E-06 GACCACGTGCCC 12
V_KROX_Q6_M00982 TRANSFAC + 1568375 1568388 4.0E-06 CCCGCCCCCGCGAC 14
V_SP1_Q6_M00196 TRANSFAC - 1568372 1568384 1.0E-06 CGGGGGCGGGGCC 13
V_SP1_Q6_M00196 TRANSFAC + 1568434 1568446 4.0E-06 GCGGGGCGGGGCC 13
MYC_MAX_MA0059.1 JASPAR + 1568464 1568474 6.0E-06 GGGCACGTGGT 11
V_EGR1_Q6_M01873 TRANSFAC - 1568376 1568385 4.0E-06 GCGGGGGCGG 10
V_SOX_Q6_M01014 TRANSFAC - 1566754 1566766 2.0E-06 CTCTTTGTTAGAG 13
V_MUSCLE_INI_B_M00321 TRANSFAC + 1568382 1568402 9.0E-06 CCGCGACGTCACGCCGCGGCC 21
V_SMAD4_Q6_M00733 TRANSFAC - 1566849 1566863 4.0E-06 GGGGTGCAGCCTGCT 15
V_HIC1_02_M01072 TRANSFAC - 1568460 1568474 8.0E-06 ACCACGTGCCCGGCG 15
V_SOX9_B1_M00410 TRANSFAC + 1566763 1566776 1.0E-06 AGAGAACAATGGGG 14
V_SP4_Q5_M01273 TRANSFAC + 1567073 1567083 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC + 1568362 1568372 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC + 1568373 1568383 1.0E-06 GCCCCGCCCCC 11
V_SP4_Q5_M01273 TRANSFAC - 1568435 1568445 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC - 1568446 1568456 2.0E-06 GCCCCGCCCCG 11
V_TAL1_01_M01591 TRANSFAC + 1567015 1567027 1.0E-05 CAGCCTTCTCTCC 13
V_PKNOX2_01_M01411 TRANSFAC - 1566871 1566886 9.0E-06 GACCGGCTGTCAAAGC 16
V_SMAD4_04_M02898 TRANSFAC - 1566581 1566597 8.0E-06 GCCTTCCCGCCACCCCT 17
V_ASCL2_04_M02841 TRANSFAC + 1566955 1566970 1.0E-05 CCGTCCCCACCCCAGT 16
V_E47_01_M00002 TRANSFAC + 1568538 1568552 5.0E-06 GCTGCAGGTGTGTGC 15
V_SOX2_01_M02246 TRANSFAC - 1567297 1567311 4.0E-06 CCTTTGTCCTGCAGC 15
V_EWSR1FLI1_01_M02252 TRANSFAC + 1566587 1566604 8.0E-06 GGCGGGAAGGCAGGAGAA 18
V_EKLF_Q5_M01874 TRANSFAC - 1567093 1567102 5.0E-06 CCACACCCAG 10
V_SOX12_03_M02796 TRANSFAC - 1566761 1566774 5.0E-06 CCATTGTTCTCTTT 14
V_SP1_Q2_01_M00933 TRANSFAC + 1568374 1568383 4.0E-06 CCCCGCCCCC 10
V_NFYA_Q5_M02106 TRANSFAC + 1566701 1566714 8.0E-06 GGGCCAATGAGCAG 14
V_SP1_Q4_01_M00932 TRANSFAC - 1568372 1568384 1.0E-06 CGGGGGCGGGGCC 13
V_SP1_Q4_01_M00932 TRANSFAC + 1568434 1568446 6.0E-06 GCGGGGCGGGGCC 13
V_GFI1_Q6_01_M02010 TRANSFAC - 1566737 1566746 7.0E-06 CTGAGATTTG 10
V_SMAD1_01_M01590 TRANSFAC + 1567301 1567312 7.0E-06 CAGGACAAAGGC 12
V_AP2_Q3_M00800 TRANSFAC + 1566974 1566989 7.0E-06 GGCCCCAGGCTGGAGA 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL