Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

LIM2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3982 lens intrinsic membrane protein 2, 19kDa chr19 - 51890710 - 51896210 51891210 Transcription Factor Binding Sites   Download all TFBS in the LIM2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints KLF14_C2H2_DBD_monomeric_14_1 SELEX - 51893883 51893896 9.0E-06 AGCCACGCCCCATT 14 EBF1_MA0154.1 JASPAR + 51894509 51894518 5.0E-06 ACTCAAGGGA 10 KLF13_C2H2_full_monomeric_18_1 SELEX - 51893880 51893897 7.0E-06 GAGCCACGCCCCATTTCT 18 HSF4_HSF_DBD_trimeric_13_1 SELEX + 51893792 51893804 5.0E-06 TTCTAGCAACTTC 13 SP4_C2H2_full_monomeric_17_1 SELEX - 51893855 51893871 1.0E-05 CAAGCCCCGCCTCTCTC 17 SP4_C2H2_full_monomeric_17_1 SELEX - 51893882 51893898 5.0E-06 CGAGCCACGCCCCATTT 17 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 51893882 51893896 4.0E-06 AGCCACGCCCCATTT 15 V_KLF15_Q2_M01714 TRANSFAC + 51893881 51893894 8.0E-06 GAAATGGGGCGTGG 14 V_EBF_Q6_M00977 TRANSFAC - 51894509 51894519 8.0E-06 GTCCCTTGAGT 11 V_HSF1_Q6_M01023 TRANSFAC + 51893791 51893807 0.0E+00 CTTCTAGCAACTTCGCC 17 V_ZFX_01_M01593 TRANSFAC + 51892433 51892448 6.0E-06 ATGCAGGCCTCGGCCC 16 V_GC_01_M00255 TRANSFAC + 51893857 51893870 3.0E-06 GAGAGGCGGGGCTT 14 V_EBF1_01_M02267 TRANSFAC + 51894509 51894518 5.0E-06 ACTCAAGGGA 10 V_HSF2_02_M01244 TRANSFAC - 51893792 51893804 6.0E-06 GAAGTTGCTAGAA 13 V_UF1H3BETA_Q6_M01068 TRANSFAC + 51893834 51893847 1.0E-06 GGTTGGGGAGGGGC 14 V_HSF1_Q6_01_M02017 TRANSFAC + 51893787 51893800 5.0E-06 GTATCTTCTAGCAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.