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LETM1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3954 leucine zipper-EF-hand containing transmembrane protein 1 chr4 - 1857474 - 1862974 1857974 Transcription Factor Binding Sites   Download all TFBS in the LETM1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 1856928 1856945 8.0E-06 TTTACAAATAAGGACATA 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 1856909 1856921 3.0E-06 ATAAACATAAAAC 13 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 1858975 1858988 8.0E-06 GAGCTCAGAGGTCA 14 NFIA_NFI_full_dimeric_15_1 SELEX + 1860589 1860603 6.0E-06 CTGGCATCCAGCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX - 1860589 1860603 5.0E-06 CTGGCTGGATGCCAG 15 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 1858975 1858988 8.0E-06 GAGCTCAGAGGTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 1858975 1858988 3.0E-06 GAGCTCAGAGGTCA 14 NFIX_NFI_full_dimeric_15_2 SELEX + 1860589 1860603 6.0E-06 CTGGCATCCAGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 1860589 1860603 7.0E-06 CTGGCTGGATGCCAG 15 Esrrb_MA0141.1 JASPAR + 1855106 1855117 3.0E-06 TGATCAAGGTCA 12 NR2F1_MA0017.1 JASPAR + 1858975 1858988 9.0E-06 TGACCTCTGAGCTC 14 Foxq1_MA0040.1 JASPAR + 1856912 1856922 5.0E-06 TTATGTTTATT 11 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 1858974 1858988 3.0E-06 GAGCTCAGAGGTCAC 15 znf143_MA0088.1 JASPAR + 1853539 1853558 2.0E-06 GGTCTCCCAGAGTTCCCTGA 20 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 1855109 1855118 1.0E-06 TCAAGGTCAA 10 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 1858187 1858203 8.0E-06 TTGCGCGGGGAGTGTCT 17 Foxd3_MA0041.1 JASPAR + 1856912 1856923 5.0E-06 TTATGTTTATTC 12 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 1855108 1855118 6.0E-06 ATCAAGGTCAA 11 NFIB_NFI_full_dimeric_15_1 SELEX + 1860589 1860603 7.0E-06 CTGGCATCCAGCCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX - 1860589 1860603 6.0E-06 CTGGCTGGATGCCAG 15 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 1855109 1855119 1.0E-06 TCAAGGTCAAC 11 FOXC1_MA0032.1 JASPAR - 1854006 1854013 7.0E-06 AGTAAGTA 8 ETV6_ETS_full_dimeric_15_1 SELEX - 1857963 1857977 5.0E-06 CCGGAACCGGTAGTC 15 PLAG1_MA0163.1 JASPAR - 1857903 1857916 1.0E-06 GGGGCCCAATGGGA 14 RORA_1_MA0071.1 JASPAR + 1855108 1855117 1.0E-06 ATCAAGGTCA 10 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 1858975 1858988 6.0E-06 GAGCTCAGAGGTCA 14 Zfx_MA0146.1 JASPAR - 1857892 1857905 3.0E-06 GGAGCCGCGGCCTG 14 V_ER_Q6_02_M00959 TRANSFAC - 1858971 1858981 3.0E-06 GAGGTCACGGT 11 V_AP1_Q2_M00173 TRANSFAC + 1853979 1853989 3.0E-06 AATGACTCAGA 11 V_FREAC7_01_M00293 TRANSFAC - 1856911 1856926 1.0E-06 TTGGAATAAACATAAA 16 V_ZFX_01_M01593 TRANSFAC + 1857889 1857904 1.0E-06 GGCCAGGCCGCGGCTC 16 V_NF1A_Q6_M02103 TRANSFAC - 1860588 1860603 7.0E-06 CTGGCTGGATGCCAGA 16 V_RORA1_01_M00156 TRANSFAC + 1855106 1855118 3.0E-06 TGATCAAGGTCAA 13 V_FOXD3_01_M00130 TRANSFAC + 1856912 1856923 4.0E-06 TTATGTTTATTC 12 V_ERR3_Q2_01_M02094 TRANSFAC + 1855107 1855119 5.0E-06 GATCAAGGTCAAC 13 V_LRH1_Q5_01_M02098 TRANSFAC + 1855107 1855117 2.0E-06 GATCAAGGTCA 11 V_STAT_Q6_M00777 TRANSFAC + 1858242 1858254 0.0E+00 AACTTTTCTGGGA 13 V_HOXA13_02_M01297 TRANSFAC - 1856909 1856917 7.0E-06 ACATAAAAC 9 V_MAFB_03_M02879 TRANSFAC - 1856923 1856937 7.0E-06 TATTTGTAAAATTGG 15 V_SP1_Q6_01_M00931 TRANSFAC + 1857879 1857888 4.0E-06 GGGGCGGGGC 10 V_NR2F2_03_M02783 TRANSFAC - 1858971 1858986 7.0E-06 GCTCAGAGGTCACGGT 16 V_CEBP_01_M00159 TRANSFAC - 1856925 1856937 2.0E-06 TATTTGTAAAATT 13 V_POU3F2_02_M00464 TRANSFAC + 1856912 1856921 9.0E-06 TTATGTTTAT 10 V_GABPA_04_M02858 TRANSFAC + 1858988 1859003 8.0E-06 CCACCTTCCCCTTCCT 16 V_FOXJ1_03_M02750 TRANSFAC - 1856909 1856924 9.0E-06 GGAATAAACATAAAAC 16 V_P50RELAP65_Q5_01_M01224 TRANSFAC + 1857330 1857341 2.0E-06 GAATTTTCCCAC 12 V_TR4_Q2_M01725 TRANSFAC + 1858973 1858983 3.0E-06 CGTGACCTCTG 11 V_LYF1_01_M00141 TRANSFAC - 1855026 1855034 9.0E-06 TTTGGGAGG 9 V_AP1_Q6_M00174 TRANSFAC + 1853979 1853989 6.0E-06 AATGACTCAGA 11 V_ZNF219_01_M01122 TRANSFAC + 1858900 1858911 7.0E-06 CTCCCCCCAGCC 12 V_COUP_01_M00158 TRANSFAC + 1858975 1858988 9.0E-06 TGACCTCTGAGCTC 14 V_AP1_Q6_01_M00925 TRANSFAC + 1853980 1853988 7.0E-06 ATGACTCAG 9 V_AP1_Q4_M00188 TRANSFAC + 1853979 1853989 7.0E-06 AATGACTCAGA 11 V_SP1_Q6_M00196 TRANSFAC + 1857877 1857889 7.0E-06 GCGGGGCGGGGCG 13 V_CDX2_Q5_M00729 TRANSFAC + 1858911 1858924 9.0E-06 CCAGTTTAATAGCC 14 V_OCT1_04_M00138 TRANSFAC + 1856912 1856934 0.0E+00 TTATGTTTATTCCAATTTTACAA 23 V_PEBP_Q6_M00984 TRANSFAC + 1853924 1853938 3.0E-06 GCTGACCACACATTT 15 V_DAX1_01_M01248 TRANSFAC + 1855104 1855123 1.0E-06 ACTGATCAAGGTCAACATCA 20 V_AP1_C_M00199 TRANSFAC + 1853980 1853988 6.0E-06 ATGACTCAG 9 V_HFH1_01_M00129 TRANSFAC + 1856912 1856923 6.0E-06 TTATGTTTATTC 12 V_CDC5_01_M00478 TRANSFAC - 1856912 1856923 3.0E-06 GAATAAACATAA 12 V_SMAD4_Q6_M00733 TRANSFAC + 1860591 1860605 3.0E-06 GGCATCCAGCCAGCT 15 V_AP1_01_M00517 TRANSFAC + 1853978 1853990 5.0E-06 GAATGACTCAGAT 13 V_HOXD9_Q2_M01834 TRANSFAC - 1856910 1856919 2.0E-06 AAACATAAAA 10 V_SF1_Q6_01_M01132 TRANSFAC - 1855109 1855117 3.0E-06 TGACCTTGA 9 V_SP4_Q5_M01273 TRANSFAC - 1857878 1857888 2.0E-06 GCCCCGCCCCG 11 V_GCNF_01_M00526 TRANSFAC + 1855108 1855125 6.0E-06 ATCAAGGTCAACATCAAC 18 V_AP1_Q4_01_M00926 TRANSFAC - 1853980 1853987 1.0E-05 TGAGTCAT 8 V_T3R_01_M00239 TRANSFAC + 1857375 1857390 5.0E-06 GCCTAAGGTCACAACA 16 V_AP1FJ_Q2_M00172 TRANSFAC + 1853979 1853989 9.0E-06 AATGACTCAGA 11 V_DR1_Q3_M00762 TRANSFAC - 1858975 1858987 8.0E-06 AGCTCAGAGGTCA 13 V_ERR1_Q2_M00511 TRANSFAC + 1855106 1855119 2.0E-06 TGATCAAGGTCAAC 14 V_ERR2_01_M01589 TRANSFAC + 1855109 1855120 5.0E-06 TCAAGGTCAACA 12 V_TCF7_04_M02921 TRANSFAC - 1854018 1854032 5.0E-06 CTTTATAATAAACTG 15 V_FRA1_Q5_M01267 TRANSFAC - 1853980 1853987 1.0E-05 TGAGTCAT 8 V_SRF_01_M00152 TRANSFAC - 1856927 1856944 7.0E-06 ATGTCCTTATTTGTAAAA 18 V_ESRRA_03_M02748 TRANSFAC + 1855106 1855122 2.0E-06 TGATCAAGGTCAACATC 17 V_SRF_02_M01257 TRANSFAC + 1855027 1855044 4.0E-06 CTCCCAAAAAGGACAAAT 18 V_SRF_02_M01257 TRANSFAC + 1856929 1856946 6.0E-06 TTACAAATAAGGACATAG 18 V_RARA_03_M02787 TRANSFAC - 1858971 1858986 5.0E-06 GCTCAGAGGTCACGGT 16 V_FOXJ2_01_M00422 TRANSFAC - 1856910 1856927 2.0E-06 ATTGGAATAAACATAAAA 18 V_SATB1_01_M01232 TRANSFAC + 1856927 1856938 9.0E-06 TTTTACAAATAA 12 V_PLAGL1_03_M02786 TRANSFAC - 1858333 1858348 4.0E-06 TCGAGGGCGCCCCTCC 16 V_CTF1_01_M01196 TRANSFAC - 1860589 1860602 5.0E-06 TGGCTGGATGCCAG 14 V_CTF1_01_M01196 TRANSFAC + 1860590 1860603 7.0E-06 TGGCATCCAGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR - 1860589 1860602 5.0E-06 TGGCTGGATGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR + 1860590 1860603 7.0E-06 TGGCATCCAGCCAG 14 V_COUP_DR1_Q6_M00765 TRANSFAC + 1858975 1858987 4.0E-06 TGACCTCTGAGCT 13 V_MIF1_01_M00279 TRANSFAC - 1854037 1854054 3.0E-06 TTGTTCCTAGGTACCAGG 18 V_TR4_03_M01782 TRANSFAC - 1858975 1858987 1.0E-06 AGCTCAGAGGTCA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.